RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	FBP1	P09201	348 aa		4.03	□□□□□ -1.76
VAM10	YOR068C	RAD18	P10862	487 aa		4.03	□□□□□ -1.76
VAM10	YOR068C	EMC1	P25574	760 aa		4.03	□□□□□ -1.76
VAM10	YOR068C	CYS3	P31373	394 aa	Known RBP	4.03	□□□□□ -1.76
VAM10	YOR068C	STO1	P34160	861 aa	Known RBP	4.03	□□□□□ -1.76
VAM10	YOR068C	BLI1	P35727	113 aa		4.03	□□□□□ -1.76
VAM10	YOR068C	AIM3	P38266	947 aa	Known RBP	4.03	□□□□□ -1.76
VAM10	YOR068C	PMC1	P38929	1173 aa	Predicted RBP	4.03	□□□□□ -1.76
VAM10	YOR068C	TPM2	P40414	161 aa		4.03	□□□□□ -1.76
VAM10	YOR068C	YIL108W	P40483	696 aa	Known RBP	4.03	□□□□□ -1.76
VAM10	YOR068C	CAF16	P43569	289 aa		4.03	□□□□□ -1.76
VAM10	YOR068C	MEH1	Q02205	184 aa		4.03	□□□□□ -1.76
VAM10	YOR068C	VPS30	Q02948	557 aa		4.03	□□□□□ -1.76
VAM10	YOR068C	YAP6	Q03935	383 aa		4.03	□□□□□ -1.76
VAM10	YOR068C	YDR338C	Q05497	695 aa		4.03	□□□□□ -1.76
VAM10	YOR068C	THI73	Q07904	523 aa		4.03	□□□□□ -1.76
VAM10	YOR068C	YPL277C	Q08989	487 aa		4.03	□□□□□ -1.76
VAM10	YOR068C	FAP7	Q12055	197 aa	Predicted RBP	4.03	□□□□□ -1.76
VAM10	YOR068C	HAL9	Q12180	1030 aa		4.03	□□□□□ -1.76
VAM10	YOR068C	YBR182C-A	Q8TGU6	64 aa		4.03	□□□□□ -1.76
VAM10	YOR068C	RPS13	P05756	151 aa	Known RBP	4.02	□□□□□ -1.77
VAM10	YOR068C	HSC82	P15108	705 aa	Known RBP	4.02	□□□□□ -1.77
VAM10	YOR068C	RPA135	P22138	1203 aa	Known RBP	4.02	□□□□□ -1.77
VAM10	YOR068C	PCL2	P25693	308 aa		4.02	□□□□□ -1.77
VAM10	YOR068C	MPE1	P35728	441 aa	Known RBP	4.02	□□□□□ -1.77
VAM10	YOR068C	PAF1	P38351	445 aa		4.02	□□□□□ -1.77
VAM10	YOR068C	MET12	P46151	657 aa		4.02	□□□□□ -1.77
VAM10	YOR068C	ALY2	P47029	1046 aa		4.02	□□□□□ -1.77
VAM10	YOR068C	PBP1	P53297	722 aa	Known RBP	4.02	□□□□□ -1.77
VAM10	YOR068C	ESF2	P53743	316 aa	Known RBP	4.02	□□□□□ -1.77
VAM10	YOR068C	FOL1	P53848	824 aa		4.02	□□□□□ -1.77
VAM10	YOR068C	UME1	Q03010	460 aa		4.02	□□□□□ -1.77
VAM10	YOR068C	ECM16	Q04217	1267 aa	Known RBP	4.02	□□□□□ -1.77
VAM10	YOR068C	YOL057W	Q08225	711 aa		4.02	□□□□□ -1.77
VAM10	YOR068C	YOR022C	Q12204	715 aa		4.02	□□□□□ -1.77
VAM10	YOR068C	PRC1	P00729	532 aa		4.01	□□□□□ -1.77
VAM10	YOR068C	HIS5	P07172	385 aa		4.01	□□□□□ -1.77
VAM10	YOR068C	MIH1	P23748	554 aa		4.01	□□□□□ -1.77
VAM10	YOR068C	CDC20	P26309	610 aa		4.01	□□□□□ -1.77
VAM10	YOR068C	HOG1	P32485	435 aa		4.01	□□□□□ -1.77
VAM10	YOR068C	STE14	P32584	239 aa		4.01	□□□□□ -1.77
VAM10	YOR068C	ATG19	P35193	415 aa		4.01	□□□□□ -1.77
VAM10	YOR068C	CTF8	P38877	133 aa		4.01	□□□□□ -1.77
VAM10	YOR068C	URM1	P40554	99 aa	Predicted RBP	4.01	□□□□□ -1.77
VAM10	YOR068C	RLP7	P40693	322 aa	Known RBP	4.01	□□□□□ -1.77
VAM10	YOR068C	SPT20	P50875	604 aa		4.01	□□□□□ -1.77
VAM10	YOR068C	PUS2	P53167	370 aa		4.01	□□□□□ -1.77
VAM10	YOR068C	DUS1	P53759	423 aa	Known RBP	4.01	□□□□□ -1.77
VAM10	YOR068C	SNP1	Q00916	300 aa	Predicted RBP	4.01	□□□□□ -1.77
VAM10	YOR068C	HFD1	Q04458	532 aa		4.01	□□□□□ -1.77
VAM10	YOR068C	RXT3	Q07458	294 aa		4.01	□□□□□ -1.77
VAM10	YOR068C	ACK1	Q07622	623 aa	Predicted RBP	4.01	□□□□□ -1.77
VAM10	YOR068C	THI21	Q08975	551 aa		4.01	□□□□□ -1.77
VAM10	YOR068C	UPC2	Q12151	913 aa		4.01	□□□□□ -1.77
VAM10	YOR068C	DIF1	O13577	133 aa		4	□□□□□ -1.77
VAM10	YOR068C	SOD2	P00447	233 aa		4	□□□□□ -1.77
VAM10	YOR068C	KAR1	P11927	433 aa		4	□□□□□ -1.77
VAM10	YOR068C	HMG1	P12683	1054 aa		4	□□□□□ -1.77
VAM10	YOR068C	SFL1	P20134	766 aa		4	□□□□□ -1.77
VAM10	YOR068C	RNQ1	P25367	405 aa		4	□□□□□ -1.77
VAM10	YOR068C	YEL1	P34225	687 aa		4	□□□□□ -1.77
VAM10	YOR068C	SAP190	P36123	1033 aa		4	□□□□□ -1.77
VAM10	YOR068C	SET5	P38890	526 aa	Known RBP	4	□□□□□ -1.77
VAM10	YOR068C	SDP1	P40479	209 aa		4	□□□□□ -1.77
VAM10	YOR068C	CHA4	P43634	648 aa		4	□□□□□ -1.77
VAM10	YOR068C	PRP43	P53131	767 aa	Known RBP	4	□□□□□ -1.77
VAM10	YOR068C	RIM8	P53179	542 aa		4	□□□□□ -1.77
VAM10	YOR068C	NOP12	Q08208	459 aa	Known RBP	4	□□□□□ -1.77
VAM10	YOR068C	TMA7	Q3E764	64 aa	Known RBP	4	□□□□□ -1.77
VAM10	YOR068C	DAL5	P15365	543 aa		3.99	□□□□□ -1.77
VAM10	YOR068C	PRP6	P19735	899 aa	Predicted RBP	3.99	□□□□□ -1.77
VAM10	YOR068C	ELM1	P32801	640 aa		3.99	□□□□□ -1.77
VAM10	YOR068C	TYS1	P36421	394 aa	Known RBP	3.99	□□□□□ -1.77
VAM10	YOR068C	PCM1	P38628	557 aa	Known RBP	3.99	□□□□□ -1.77
VAM10	YOR068C	MGS1	P40151	587 aa		3.99	□□□□□ -1.77
VAM10	YOR068C	NIT1	P40447	199 aa		3.99	□□□□□ -1.77
VAM10	YOR068C	SHR5	P41912	237 aa		3.99	□□□□□ -1.77
VAM10	YOR068C	AVT1	P47082	602 aa		3.99	□□□□□ -1.77
VAM10	YOR068C	NCS6	P53088	359 aa		3.99	□□□□□ -1.77
VAM10	YOR068C	MET13	P53128	600 aa		3.99	□□□□□ -1.77
VAM10	YOR068C	COG8	Q04632	607 aa		3.99	□□□□□ -1.77
VAM10	YOR068C	ENT2	Q05785	613 aa		3.99	□□□□□ -1.77
VAM10	YOR068C	YLR224W	Q05947	369 aa		3.99	□□□□□ -1.77
VAM10	YOR068C	NPC2	Q12408	173 aa		3.99	□□□□□ -1.77
VAM10	YOR068C	TMA17	Q12513	150 aa		3.99	□□□□□ -1.77
VAM10	YOR068C	OPI1	P21957	404 aa		3.98	□□□□□ -1.77
VAM10	YOR068C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
VAM10	YOR068C	SED4	P25365	1065 aa		3.98	□□□□□ -1.77
VAM10	YOR068C	YHR078W	P38799	552 aa		3.98	□□□□□ -1.77
VAM10	YOR068C	AIM14	P53109	570 aa		3.98	□□□□□ -1.77
VAM10	YOR068C	CEF1	Q03654	590 aa	Predicted RBP	3.98	□□□□□ -1.77
VAM10	YOR068C	VMS1	Q04311	632 aa	Known RBP	3.98	□□□□□ -1.77
VAM10	YOR068C	CRR1	Q05790	422 aa		3.98	□□□□□ -1.77
VAM10	YOR068C	COG4	Q06096	861 aa		3.98	□□□□□ -1.77
VAM10	YOR068C	ATG33	Q06485	197 aa		3.98	□□□□□ -1.77
VAM10	YOR068C	PSK2	Q08217	1101 aa		3.98	□□□□□ -1.77
VAM10	YOR068C	TRE2	Q08693	809 aa		3.98	□□□□□ -1.77
VAM10	YOR068C	GUP2	Q08929	609 aa		3.98	□□□□□ -1.77
VAM10	YOR068C	ERP4	Q12450	207 aa		3.98	□□□□□ -1.77
VAM10	YOR068C	KCS1	Q12494	1050 aa		3.98	□□□□□ -1.77

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