RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP40, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP40YOL142W GEA1P47102 1408 aaPredicted RBP6.67□□□□□ -1.34
RRP40YOL142W LST4P34239 828 aa6.66□□□□□ -1.34
RRP40YOL142W RPN4Q03465 531 aa6.66□□□□□ -1.34
RRP40YOL142W WHI4Q07655 649 aaKnown RBP6.66□□□□□ -1.34
RRP40YOL142W TOM70P07213 617 aaKnown RBP6.65□□□□□ -1.34
RRP40YOL142W STE13P33894 931 aa6.65□□□□□ -1.34
RRP40YOL142W ATG19P35193 415 aa6.65□□□□□ -1.34
RRP40YOL142W TMA10Q06177 86 aa6.65□□□□□ -1.34
RRP40YOL142W SEC7P11075 2009 aaKnown RBP6.65□□□□□ -1.35
RRP40YOL142W ARO1P08566 1588 aaKnown RBP6.65□□□□□ -1.35
RRP40YOL142W RFA1P22336 621 aaKnown RBP6.64□□□□□ -1.35
RRP40YOL142W PBP2P38151 413 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
RRP40YOL142W PLB1P39105 664 aa6.64□□□□□ -1.35
RRP40YOL142W URM1P40554 99 aaPredicted RBP6.64□□□□□ -1.35
RRP40YOL142W ENV7Q12003 364 aa6.64□□□□□ -1.35
RRP40YOL142W DRS2P39524 1355 aa6.64□□□□□ -1.35
RRP40YOL142W IQG1Q12280 1495 aa6.64□□□□□ -1.35
RRP40YOL142W BUD3P25558 1636 aa6.64□□□□□ -1.35
RRP40YOL142W YCR015CP25616 317 aa6.63□□□□□ -1.35
RRP40YOL142W MPT5P39016 859 aaKnown RBP RIP-Chip data6.63□□□□□ -1.35not detected
RRP40YOL142W GIP4P39732 760 aa6.63□□□□□ -1.35
RRP40YOL142W VPS30Q02948 557 aa6.63□□□□□ -1.35
RRP40YOL142W STE11P23561 717 aa6.62□□□□□ -1.35
RRP40YOL142W CTS1P29029 562 aa6.62□□□□□ -1.35
RRP40YOL142W RPD3P32561 433 aa6.62□□□□□ -1.35
RRP40YOL142W CHZ1P40019 153 aaPredicted RBP6.62□□□□□ -1.35
RRP40YOL142W BUD6P41697 788 aa6.62□□□□□ -1.35
RRP40YOL142W SSL1Q04673 461 aaPredicted RBP6.62□□□□□ -1.35
RRP40YOL142W CAT8P39113 1433 aa6.61□□□□□ -1.35
RRP40YOL142W NUP157P40064 1391 aaKnown RBP6.61□□□□□ -1.35
RRP40YOL142W MPH2P0CD99 609 aa6.61□□□□□ -1.35
RRP40YOL142W URA1P28272 314 aaPredicted RBP6.61□□□□□ -1.35
RRP40YOL142W YKL222CP35995 705 aa6.61□□□□□ -1.35
RRP40YOL142W MNN10P50108 393 aaKnown RBP6.61□□□□□ -1.35
RRP40YOL142W NCS6P53088 359 aa6.61□□□□□ -1.35
RRP40YOL142W MCM6P53091 1017 aaKnown RBP6.61□□□□□ -1.35
RRP40YOL142W TRM3Q07527 1436 aa6.6□□□□□ -1.35
RRP40YOL142W ERR1P0CX10 437 aa6.6□□□□□ -1.35
RRP40YOL142W ERR2P0CX11 437 aa6.6□□□□□ -1.35
RRP40YOL142W SHM2P37291 469 aaKnown RBP6.6□□□□□ -1.35
RRP40YOL142W CEP3P40969 608 aa6.6□□□□□ -1.35
RRP40YOL142W HDA1P53973 706 aa6.6□□□□□ -1.35
RRP40YOL142W UPC2Q12151 913 aa6.6□□□□□ -1.35
RRP40YOL142W KCS1Q12494 1050 aa6.6□□□□□ -1.35
RRP40YOL142W MMS1Q06211 1407 aa6.59□□□□□ -1.35
RRP40YOL142W TIM23P32897 222 aa6.59□□□□□ -1.35
RRP40YOL142W TYE7P33122 291 aaPredicted RBP6.59□□□□□ -1.35
RRP40YOL142W YIL108WP40483 696 aaKnown RBP6.59□□□□□ -1.35
RRP40YOL142W GYP8P43570 497 aa6.59□□□□□ -1.35
RRP40YOL142W ALG2P43636 503 aa6.59□□□□□ -1.35
RRP40YOL142W NIT3P49954 291 aa6.59□□□□□ -1.35
RRP40YOL142W YGR283CP53336 341 aaPredicted RBP6.59□□□□□ -1.35
RRP40YOL142W YKR011CQ02209 353 aa6.59□□□□□ -1.35
RRP40YOL142W NPC2Q12408 173 aa6.59□□□□□ -1.35
RRP40YOL142W FBP1P09201 348 aa6.58□□□□□ -1.36
RRP40YOL142W EMC3P36039 253 aa6.58□□□□□ -1.36
RRP40YOL142W SED4P25365 1065 aa6.57□□□□□ -1.36
RRP40YOL142W STE14P32584 239 aa6.57□□□□□ -1.36
RRP40YOL142W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
RRP40YOL142W RPS9AO13516 197 aaKnown RBP6.56□□□□□ -1.36
RRP40YOL142W PHR1P05066 565 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36not detected
RRP40YOL142W CIT2P08679 460 aa6.56□□□□□ -1.36
RRP40YOL142W NUP82P40368 713 aa6.56□□□□□ -1.36
RRP40YOL142W EXG2P52911 562 aa6.56□□□□□ -1.36
RRP40YOL142W DAM1P53267 343 aa6.56□□□□□ -1.36
RRP40YOL142W NOG2P53742 486 aaKnown RBP6.56□□□□□ -1.36
RRP40YOL142W GDH3P39708 457 aa6.55□□□□□ -1.36
RRP40YOL142W SDP1P40479 209 aa6.55□□□□□ -1.36
RRP40YOL142W YOR093CQ12275 1648 aa6.54□□□□□ -1.36
RRP40YOL142W DAL7P21826 554 aa6.54□□□□□ -1.36
RRP40YOL142W HCM1P25364 564 aa6.54□□□□□ -1.36
RRP40YOL142W DCG1P32460 244 aa6.54□□□□□ -1.36
RRP40YOL142W CYS3P31373 394 aaKnown RBP6.53□□□□□ -1.36
RRP40YOL142W SPC29P33419 253 aa6.53□□□□□ -1.36
RRP40YOL142W CTF8P38877 133 aa6.53□□□□□ -1.36
RRP40YOL142W HSV2P50079 448 aaPredicted RBP6.53□□□□□ -1.36
RRP40YOL142W MAL11P53048 616 aa6.53□□□□□ -1.36
RRP40YOL142W TAD1P53065 400 aa6.53□□□□□ -1.36
RRP40YOL142W FPR4Q06205 392 aaPredicted RBP6.53□□□□□ -1.36
RRP40YOL142W YSP2Q06681 1438 aa6.52□□□□□ -1.37
RRP40YOL142W PMA1P05030 918 aaKnown RBP6.52□□□□□ -1.37
RRP40YOL142W PHO8P11491 566 aa6.52□□□□□ -1.37
RRP40YOL142W RAD53P22216 821 aa6.52□□□□□ -1.37
RRP40YOL142W KAR4P25583 335 aa6.52□□□□□ -1.37
RRP40YOL142W OSW7P43611 510 aa6.52□□□□□ -1.37
RRP40YOL142W PHO23P50947 330 aa6.52□□□□□ -1.37
RRP40YOL142W PUS2P53167 370 aa6.52□□□□□ -1.37
RRP40YOL142W ATP25Q03153 612 aa6.52□□□□□ -1.37
RRP40YOL142W LRS4Q04087 347 aaKnown RBP6.52□□□□□ -1.37
RRP40YOL142W YDR514CQ04408 483 aa6.52□□□□□ -1.37
RRP40YOL142W MET7Q08645 548 aa6.52□□□□□ -1.37
RRP40YOL142W GUP2Q08929 609 aa6.52□□□□□ -1.37
RRP40YOL142W YLR125WQ12138 136 aa6.52□□□□□ -1.37
RRP40YOL142W YCL002CP25565 263 aa6.51□□□□□ -1.37
RRP40YOL142W REH1Q06709 432 aa6.51□□□□□ -1.37
RRP40YOL142W NTO1Q12311 748 aa6.51□□□□□ -1.37
RRP40YOL142W TY4A-JP47023 414 aa6.5□□□□□ -1.37
RRP40YOL142W DUS1P53759 423 aaKnown RBP6.5□□□□□ -1.37
RRP40YOL142W SLU7Q02775 382 aaKnown RBP6.5□□□□□ -1.37
RRP40YOL142W ENB1Q08299 606 aa6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms