RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W SIS1P25294 352 aaKnown RBP11.63□□□□□ -0.55
PRE6YOL038W PEP7P32609 515 aa11.63□□□□□ -0.55
PRE6YOL038W RIM4P38741 713 aa11.63□□□□□ -0.55
PRE6YOL038W UBP5P39944 805 aa11.63□□□□□ -0.55
PRE6YOL038W IRC10Q08118 586 aa11.63□□□□□ -0.55
PRE6YOL038W APM4Q99186 491 aa11.63□□□□□ -0.55
PRE6YOL038W ATP1P07251 545 aaKnown RBP11.62□□□□□ -0.55
PRE6YOL038W ASP3-2P0CX77 362 aa11.62□□□□□ -0.55
PRE6YOL038W ASP3-3P0CX78 362 aa11.62□□□□□ -0.55
PRE6YOL038W ASP3-4P0CX79 362 aa11.62□□□□□ -0.55
PRE6YOL038W ASP3-1P0CZ17 362 aa11.62□□□□□ -0.55
PRE6YOL038W IMG2P25642 146 aaPredicted RBP11.62□□□□□ -0.55
PRE6YOL038W SIF2P38262 535 aa11.62□□□□□ -0.55
PRE6YOL038W CCM1P48237 864 aaPredicted RBP11.62□□□□□ -0.55
PRE6YOL038W PGS1P25578 521 aa11.61□□□□□ -0.55
PRE6YOL038W MUD1P32605 298 aaKnown RBP11.61□□□□□ -0.55
PRE6YOL038W POL31P46957 487 aa11.61□□□□□ -0.55
PRE6YOL038W PCT1P13259 424 aa11.6□□□□□ -0.55
PRE6YOL038W VMA1P17255 1071 aaKnown RBP11.6□□□□□ -0.55
PRE6YOL038W AGP2P38090 596 aa11.6□□□□□ -0.55
PRE6YOL038W YHR054CP38780 354 aa11.6□□□□□ -0.55
PRE6YOL038W NPP2P39997 493 aa11.6□□□□□ -0.55
PRE6YOL038W SLG1P54867 378 aa11.6□□□□□ -0.55
PRE6YOL038W YDR344CQ05510 147 aa11.6□□□□□ -0.55
PRE6YOL038W PEX19Q07418 342 aa11.6□□□□□ -0.55
PRE6YOL038W YOL075CQ08234 1294 aa11.6□□□□□ -0.55
PRE6YOL038W IRA2P19158 3079 aa11.6□□□□□ -0.55
PRE6YOL038W GAL80P04387 435 aa11.59□□□□□ -0.55
PRE6YOL038W MAS1P10507 462 aa11.59□□□□□ -0.55
PRE6YOL038W SIP5P40210 489 aaKnown RBP11.59□□□□□ -0.55
PRE6YOL038W LSC2P53312 427 aa11.59□□□□□ -0.55
PRE6YOL038W ADA2Q02336 434 aa11.59□□□□□ -0.55
PRE6YOL038W TLG2Q08144 397 aa11.59□□□□□ -0.55
PRE6YOL038W IME1P21190 360 aa11.58□□□□□ -0.56
PRE6YOL038W PDE1P22434 369 aa11.58□□□□□ -0.56
PRE6YOL038W FMP25Q08023 583 aa11.58□□□□□ -0.56
PRE6YOL038W TPK1P06244 397 aa11.57□□□□□ -0.56
PRE6YOL038W VPH1P32563 840 aaKnown RBP11.57□□□□□ -0.56
PRE6YOL038W YKL091CP33324 310 aaKnown RBP11.57□□□□□ -0.56
PRE6YOL038W TOS3P43637 560 aa11.57□□□□□ -0.56
PRE6YOL038W ART5P53244 586 aaKnown RBP11.57□□□□□ -0.56
PRE6YOL038W RAM1P22007 431 aa11.56□□□□□ -0.56
PRE6YOL038W MRF1P30775 413 aaPredicted RBP11.56□□□□□ -0.56
PRE6YOL038W SLA2P33338 968 aa11.56□□□□□ -0.56
PRE6YOL038W PIN4P34217 668 aaKnown RBP RIP-Chip data11.56□□□□□ -0.56not detected
PRE6YOL038W FYV8P46949 817 aaKnown RBP11.56□□□□□ -0.56
PRE6YOL038W DAS1P47005 663 aa11.56□□□□□ -0.56
PRE6YOL038W ZAP1P47043 880 aa11.56□□□□□ -0.56
PRE6YOL038W DON1Q05610 365 aa11.56□□□□□ -0.56
PRE6YOL038W SLX4Q12098 748 aa11.56□□□□□ -0.56
PRE6YOL038W SGT2Q12118 346 aaKnown RBP11.56□□□□□ -0.56
PRE6YOL038W SSB1P11484 613 aaKnown RBP11.55□□□□□ -0.56
PRE6YOL038W PUP3P25451 205 aaKnown RBP11.55□□□□□ -0.56
PRE6YOL038W COY1P34237 679 aa11.55□□□□□ -0.56
PRE6YOL038W YBR056WP38081 501 aa11.55□□□□□ -0.56
PRE6YOL038W SSB2P40150 613 aaKnown RBP11.55□□□□□ -0.56
PRE6YOL038W TIM8P57744 87 aa11.55□□□□□ -0.56
PRE6YOL038W HCR1Q05775 265 aaKnown RBP11.55□□□□□ -0.56
PRE6YOL038W MLH2Q07980 695 aa11.55□□□□□ -0.56
PRE6YOL038W LEA1Q08963 238 aaPredicted RBP11.55□□□□□ -0.56
PRE6YOL038W SEN1Q00416 2231 aaKnown RBP11.54□□□□□ -0.56
PRE6YOL038W HMG2P12684 1045 aa11.54□□□□□ -0.56
PRE6YOL038W ARP1P38696 384 aa11.54□□□□□ -0.56
PRE6YOL038W SDH5Q08230 162 aa11.54□□□□□ -0.56
PRE6YOL038W MED1Q12321 566 aa11.54□□□□□ -0.56
PRE6YOL038W CHS1P08004 1131 aa11.53□□□□□ -0.56
PRE6YOL038W VPS3P23643 1011 aa11.53□□□□□ -0.56
PRE6YOL038W CDC11P32458 415 aa11.53□□□□□ -0.56
PRE6YOL038W FAL1Q12099 399 aaKnown RBP11.53□□□□□ -0.56
PRE6YOL038W HRT3Q12347 344 aa11.53□□□□□ -0.56
PRE6YOL038W CHS2P14180 963 aa11.52□□□□□ -0.57
PRE6YOL038W TBS1P38114 1094 aa11.52□□□□□ -0.57
PRE6YOL038W BDH2P39713 417 aa11.52□□□□□ -0.57
PRE6YOL038W SNF7P39929 240 aaKnown RBP11.52□□□□□ -0.57
PRE6YOL038W HER2Q03557 464 aa11.52□□□□□ -0.57
PRE6YOL038W VMS1Q04311 632 aaKnown RBP11.52□□□□□ -0.57
PRE6YOL038W YPR027CQ12079 277 aa11.52□□□□□ -0.57
PRE6YOL038W DDP1Q99321 188 aaKnown RBP11.52□□□□□ -0.57
PRE6YOL038W GPA1P08539 472 aa11.51□□□□□ -0.57
PRE6YOL038W SCJ1P25303 377 aa11.51□□□□□ -0.57
PRE6YOL038W PEX34P25584 144 aa11.51□□□□□ -0.57
PRE6YOL038W PSO2P30620 661 aa11.51□□□□□ -0.57
PRE6YOL038W YER130CP39959 443 aa11.51□□□□□ -0.57
PRE6YOL038W YPT11P48559 417 aa11.51□□□□□ -0.57
PRE6YOL038W BIO5P53744 561 aaKnown RBP11.51□□□□□ -0.57
PRE6YOL038W YNL011CP53980 444 aa11.51□□□□□ -0.57
PRE6YOL038W ACC1Q00955 2233 aaKnown RBP11.51□□□□□ -0.57
PRE6YOL038W CDC42P19073 191 aa11.5□□□□□ -0.57
PRE6YOL038W SAC6P32599 642 aaKnown RBP11.5□□□□□ -0.57
PRE6YOL038W FTR1P40088 404 aa11.5□□□□□ -0.57
PRE6YOL038W ALT1P52893 592 aa11.5□□□□□ -0.57
PRE6YOL038W TBF1Q02457 562 aa11.5□□□□□ -0.57
PRE6YOL038W TIF35Q04067 274 aaKnown RBP11.5□□□□□ -0.57
PRE6YOL038W RLP24Q07915 199 aaKnown RBP11.5□□□□□ -0.57
PRE6YOL038W RRT12P25381 491 aa11.49□□□□□ -0.57
PRE6YOL038W ISF1P32488 338 aa11.49□□□□□ -0.57
PRE6YOL038W ELM1P32801 640 aa11.49□□□□□ -0.57
PRE6YOL038W DUG2P38149 878 aa11.49□□□□□ -0.57
PRE6YOL038W SFB3P38810 929 aa11.49□□□□□ -0.57
PRE6YOL038W HST1P53685 503 aa11.49□□□□□ -0.57
Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms