RNA–Protein interactions for RNA: YMR139W

RIM11, Transcript of Protein kinase, yeast

Gene RIM11, Length 1,113 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM11	YMR139W	RPS19B	P07281	144 aa	Predicted RBP	4.29	□□□□□ -1.72
RIM11	YMR139W	DBP2	P24783	546 aa	Known RBP	4.29	□□□□□ -1.72
RIM11	YMR139W	ROX1	P25042	368 aa		4.29	□□□□□ -1.72
RIM11	YMR139W	YNG2	P38806	282 aa	Known RBP	4.29	□□□□□ -1.72
RIM11	YMR139W	MPH1	P40562	993 aa		4.29	□□□□□ -1.72
RIM11	YMR139W	ENT3	P47160	408 aa		4.29	□□□□□ -1.72
RIM11	YMR139W	SPO1	P53541	631 aa		4.29	□□□□□ -1.72
RIM11	YMR139W	ENB1	Q08299	606 aa		4.29	□□□□□ -1.72
RIM11	YMR139W	BMS1	Q08965	1183 aa	Known RBP	4.29	□□□□□ -1.72
RIM11	YMR139W	PEX2	P32800	271 aa		4.28	□□□□□ -1.72
RIM11	YMR139W	GEM1	P39722	662 aa		4.28	□□□□□ -1.72
RIM11	YMR139W	DJP1	P40564	432 aa		4.28	□□□□□ -1.72
RIM11	YMR139W	TIM44	Q01852	431 aa		4.28	□□□□□ -1.72
RIM11	YMR139W	NKP2	Q06162	153 aa		4.28	□□□□□ -1.72
RIM11	YMR139W	SLM3	Q12093	417 aa		4.28	□□□□□ -1.72
RIM11	YMR139W	ACF2	Q12168	779 aa		4.28	□□□□□ -1.72
RIM11	YMR139W	OSW2	Q12202	724 aa		4.28	□□□□□ -1.72
RIM11	YMR139W	THS1	P04801	734 aa	Known RBP	4.27	□□□□□ -1.73
RIM11	YMR139W	VPS24	P36095	224 aa	Known RBP	4.27	□□□□□ -1.73
RIM11	YMR139W	NMD2	P38798	1089 aa	Known RBP	4.27	□□□□□ -1.73
RIM11	YMR139W	YER158C	P40095	573 aa		4.27	□□□□□ -1.73
RIM11	YMR139W	YGR012W	P53206	393 aa		4.27	□□□□□ -1.73
RIM11	YMR139W	LSP1	Q12230	341 aa	Known RBP	4.27	□□□□□ -1.73
RIM11	YMR139W	NUP145	P49687	1317 aa		4.26	□□□□□ -1.73
RIM11	YMR139W	KCC4	P25389	1037 aa		4.26	□□□□□ -1.73
RIM11	YMR139W	KAR4	P25583	335 aa		4.26	□□□□□ -1.73
RIM11	YMR139W	PRP45	P28004	379 aa	Predicted RBP	4.26	□□□□□ -1.73
RIM11	YMR139W	RAD24	P32641	659 aa		4.26	□□□□□ -1.73
RIM11	YMR139W	SLA2	P33338	968 aa		4.26	□□□□□ -1.73
RIM11	YMR139W	KTR4	P38131	464 aa		4.26	□□□□□ -1.73
RIM11	YMR139W	PPX1	P38698	397 aa		4.26	□□□□□ -1.73
RIM11	YMR139W	YGR122W	P53272	402 aa		4.26	□□□□□ -1.73
RIM11	YMR139W	NSE3	Q05541	303 aa		4.26	□□□□□ -1.73
RIM11	YMR139W	OMS1	Q06668	471 aa		4.26	□□□□□ -1.73
RIM11	YMR139W	WHI5	Q12416	295 aa		4.26	□□□□□ -1.73
RIM11	YMR139W	RSF2	P46974	1380 aa		4.26	□□□□□ -1.73
RIM11	YMR139W	ROM2	P51862	1356 aa	Known RBP	4.26	□□□□□ -1.73
RIM11	YMR139W	SPE1	P08432	466 aa		4.25	□□□□□ -1.73
RIM11	YMR139W	MRP7	P12687	371 aa		4.25	□□□□□ -1.73
RIM11	YMR139W	ERG4	P25340	473 aa		4.25	□□□□□ -1.73
RIM11	YMR139W	MSP1	P28737	362 aa		4.25	□□□□□ -1.73
RIM11	YMR139W	GCD7	P32502	381 aa	Predicted RBP	4.25	□□□□□ -1.73
RIM11	YMR139W	SRP101	P32916	621 aa		4.25	□□□□□ -1.73
RIM11	YMR139W	RFC1	P38630	861 aa	Known RBP	4.25	□□□□□ -1.73
RIM11	YMR139W	BUL1	P48524	976 aa		4.25	□□□□□ -1.73
RIM11	YMR139W	GND2	P53319	492 aa		4.25	□□□□□ -1.73
RIM11	YMR139W	MUK1	Q02866	612 aa		4.25	□□□□□ -1.73
RIM11	YMR139W	YOL057W	Q08225	711 aa		4.25	□□□□□ -1.73
RIM11	YMR139W	GNT1	Q12096	491 aa		4.25	□□□□□ -1.73
RIM11	YMR139W	CDC16	P09798	840 aa		4.24	□□□□□ -1.73
RIM11	YMR139W	RAD4	P14736	754 aa		4.24	□□□□□ -1.73
RIM11	YMR139W	MTH1	P35198	433 aa		4.24	□□□□□ -1.73
RIM11	YMR139W	SPC42	P36094	363 aa		4.24	□□□□□ -1.73
RIM11	YMR139W	BRN1	P38170	754 aa		4.24	□□□□□ -1.73
RIM11	YMR139W	YAP1801	P38856	637 aa		4.24	□□□□□ -1.73
RIM11	YMR139W	CCC2	P38995	1004 aa		4.24	□□□□□ -1.73
RIM11	YMR139W	PSP2	P50109	593 aa	Known RBP	4.24	□□□□□ -1.73
RIM11	YMR139W	SPP382	Q06411	708 aa	Predicted RBP	4.24	□□□□□ -1.73
RIM11	YMR139W	YDR306C	Q06640	478 aa		4.24	□□□□□ -1.73
RIM11	YMR139W	NOP8	Q08287	484 aa	Predicted RBP	4.24	□□□□□ -1.73
RIM11	YMR139W	FAS2	P19097	1887 aa	Known RBP	4.24	□□□□□ -1.73
RIM11	YMR139W	GCR1	P07261	785 aa		4.23	□□□□□ -1.73
RIM11	YMR139W	SSF1	P38789	453 aa	Predicted RBP	4.23	□□□□□ -1.73
RIM11	YMR139W	GNP1	P48813	663 aa		4.23	□□□□□ -1.73
RIM11	YMR139W	NCS6	P53088	359 aa		4.23	□□□□□ -1.73
RIM11	YMR139W	TIF35	Q04067	274 aa	Known RBP	4.23	□□□□□ -1.73
RIM11	YMR139W	ALE1	Q08548	619 aa		4.23	□□□□□ -1.73
RIM11	YMR139W	MSC6	Q08818	692 aa	Known RBP	4.23	□□□□□ -1.73
RIM11	YMR139W	SWC3	P31376	625 aa		4.22	□□□□□ -1.73
RIM11	YMR139W	MTC3	P53077	123 aa		4.22	□□□□□ -1.73
RIM11	YMR139W	ZDS2	P54786	942 aa		4.22	□□□□□ -1.73
RIM11	YMR139W	CDA1	Q06702	301 aa		4.22	□□□□□ -1.73
RIM11	YMR139W	WHI4	Q07655	649 aa	Known RBP	4.22	□□□□□ -1.73
RIM11	YMR139W	SWI1	P09547	1314 aa		4.21	□□□□□ -1.73
RIM11	YMR139W	RNR2	P09938	399 aa	Known RBP	4.21	□□□□□ -1.74
RIM11	YMR139W	NUP133	P36161	1157 aa		4.21	□□□□□ -1.74
RIM11	YMR139W	DNM1	P54861	757 aa		4.21	□□□□□ -1.74
RIM11	YMR139W	RNT1	Q02555	471 aa		4.21	□□□□□ -1.74
RIM11	YMR139W	NDJ1	Q12366	352 aa		4.21	□□□□□ -1.74
RIM11	YMR139W	VAS1	P07806	1104 aa	Known RBP	4.2	□□□□□ -1.74
RIM11	YMR139W	RER2	P35196	286 aa		4.2	□□□□□ -1.74
RIM11	YMR139W	PNT1	P38969	423 aa		4.2	□□□□□ -1.74
RIM11	YMR139W	RPS26A	P39938	119 aa	Known RBP	4.2	□□□□□ -1.74
RIM11	YMR139W	RPS26B	P39939	119 aa	Known RBP	4.2	□□□□□ -1.74
RIM11	YMR139W	NPA3	P47122	385 aa		4.2	□□□□□ -1.74
RIM11	YMR139W	ADE16	P54113	591 aa	Known RBP	4.2	□□□□□ -1.74
RIM11	YMR139W	NOT3	P06102	836 aa	Known RBP	4.19	□□□□□ -1.74
RIM11	YMR139W	HSF1	P10961	833 aa		4.19	□□□□□ -1.74
RIM11	YMR139W	OSM1	P21375	501 aa	Known RBP	4.19	□□□□□ -1.74
RIM11	YMR139W	YJR008W	P47085	338 aa		4.19	□□□□□ -1.74
RIM11	YMR139W	VPS20	Q04272	221 aa		4.19	□□□□□ -1.74
RIM11	YMR139W	GUP2	Q08929	609 aa		4.19	□□□□□ -1.74
RIM11	YMR139W	AFT2	Q08957	416 aa		4.19	□□□□□ -1.74
RIM11	YMR139W	PDR18	P53756	1333 aa		4.19	□□□□□ -1.74
RIM11	YMR139W	ALG7	P07286	448 aa		4.18	□□□□□ -1.74
RIM11	YMR139W	RAD27	P26793	382 aa		4.18	□□□□□ -1.74
RIM11	YMR139W	ECM21	P38167	1117 aa	Known RBP	4.18	□□□□□ -1.74
RIM11	YMR139W	STM1	P39015	273 aa	Known RBP	4.18	□□□□□ -1.74
RIM11	YMR139W	UBP12	P39538	1254 aa		4.18	□□□□□ -1.74
RIM11	YMR139W	BDH2	P39713	417 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 66.9 ms