RNA–Protein interactions for RNA: YMR044W

IOC4, Transcript of Member of a complex (Isw1b) with Isw1p and Ioc2p, yeast

Gene IOC4, Length 1,428 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IOC4	YMR044W	PEX15	Q08215	383 aa		4.98	□□□□□ -1.61
IOC4	YMR044W	MSS18	P08593	268 aa		4.97	□□□□□ -1.61
IOC4	YMR044W	SAM35	P14693	329 aa		4.97	□□□□□ -1.61
IOC4	YMR044W	SFA1	P32771	386 aa		4.97	□□□□□ -1.61
IOC4	YMR044W	QRI7	P43122	407 aa		4.97	□□□□□ -1.61
IOC4	YMR044W	PTA1	Q01329	785 aa	Predicted RBP	4.97	□□□□□ -1.61
IOC4	YMR044W	HCA4	P20448	770 aa	Known RBP	4.97	□□□□□ -1.61
IOC4	YMR044W	ACE2	P21192	770 aa		4.97	□□□□□ -1.61
IOC4	YMR044W	TOA1	P32773	286 aa		4.97	□□□□□ -1.61
IOC4	YMR044W	TFC3	P34111	1160 aa		4.97	□□□□□ -1.61
IOC4	YMR044W	HSL7	P38274	827 aa		4.97	□□□□□ -1.61
IOC4	YMR044W	YHL012W	P38709	493 aa		4.97	□□□□□ -1.61
IOC4	YMR044W	ALY2	P47029	1046 aa		4.97	□□□□□ -1.61
IOC4	YMR044W	HFM1	P51979	1187 aa		4.97	□□□□□ -1.61
IOC4	YMR044W	NPY1	P53164	384 aa		4.97	□□□□□ -1.61
IOC4	YMR044W	YGR035C	P53222	116 aa		4.97	□□□□□ -1.61
IOC4	YMR044W	SPC19	Q03954	165 aa		4.97	□□□□□ -1.61
IOC4	YMR044W	YHM2	Q04013	314 aa		4.97	□□□□□ -1.61
IOC4	YMR044W	OPY2	Q06810	360 aa		4.97	□□□□□ -1.61
IOC4	YMR044W	YVC1	Q12324	675 aa		4.97	□□□□□ -1.61
IOC4	YMR044W	SEC18	P18759	758 aa	Known RBP	4.96	□□□□□ -1.62
IOC4	YMR044W	MSM1	P22438	575 aa		4.96	□□□□□ -1.62
IOC4	YMR044W	MIH1	P23748	554 aa		4.96	□□□□□ -1.62
IOC4	YMR044W	RER1	P25560	188 aa		4.96	□□□□□ -1.62
IOC4	YMR044W	YCL002C	P25565	263 aa		4.96	□□□□□ -1.62
IOC4	YMR044W	RSC6	P25632	483 aa		4.96	□□□□□ -1.62
IOC4	YMR044W	MSH1	P25846	959 aa		4.96	□□□□□ -1.62
IOC4	YMR044W	NAM7	P30771	971 aa	Known RBP	4.96	□□□□□ -1.62
IOC4	YMR044W	FUN30	P31380	1131 aa		4.96	□□□□□ -1.62
IOC4	YMR044W	BEM3	P32873	1128 aa		4.96	□□□□□ -1.62
IOC4	YMR044W	WHI3	P34761	661 aa	Known RBP	4.96	□□□□□ -1.62
IOC4	YMR044W	MAL31	P38156	614 aa		4.96	□□□□□ -1.62
IOC4	YMR044W	CCZ1	P38273	704 aa		4.96	□□□□□ -1.62
IOC4	YMR044W	HXT16	P47185	567 aa		4.96	□□□□□ -1.62
IOC4	YMR044W	TAD1	P53065	400 aa		4.96	□□□□□ -1.62
IOC4	YMR044W	ECM38	Q05902	660 aa	Predicted RBP	4.96	□□□□□ -1.62
IOC4	YMR044W	YPR196W	Q06595	470 aa		4.96	□□□□□ -1.62
IOC4	YMR044W	HIM1	Q06674	414 aa		4.96	□□□□□ -1.62
IOC4	YMR044W	XYL2	Q07993	356 aa		4.96	□□□□□ -1.62
IOC4	YMR044W	CLF1	Q12309	687 aa	Predicted RBP	4.96	□□□□□ -1.62
IOC4	YMR044W	YOL114C	Q12322	202 aa		4.96	□□□□□ -1.62
IOC4	YMR044W	SSM4	P40318	1319 aa		4.95	□□□□□ -1.62
IOC4	YMR044W	AI3	P03877	415 aa		4.95	□□□□□ -1.62
IOC4	YMR044W	CDC31	P06704	161 aa	Known RBP	4.95	□□□□□ -1.62
IOC4	YMR044W	DAL7	P21826	554 aa		4.95	□□□□□ -1.62
IOC4	YMR044W	TRK2	P28584	889 aa		4.95	□□□□□ -1.62
IOC4	YMR044W	CCR4	P31384	837 aa	Known RBP	4.95	□□□□□ -1.62
IOC4	YMR044W	RRT14	P40470	206 aa		4.95	□□□□□ -1.62
IOC4	YMR044W	ERR3	P42222	437 aa		4.95	□□□□□ -1.62
IOC4	YMR044W	UBC9	P50623	157 aa	Predicted RBP	4.95	□□□□□ -1.62
IOC4	YMR044W	CNM67	P53865	581 aa	Known RBP	4.95	□□□□□ -1.62
IOC4	YMR044W	SDH1	Q00711	640 aa		4.95	□□□□□ -1.62
IOC4	YMR044W	LRS4	Q04087	347 aa	Known RBP	4.95	□□□□□ -1.62
IOC4	YMR044W	BLS1	Q06071	122 aa		4.95	□□□□□ -1.62
IOC4	YMR044W	YDR056C	Q12025	205 aa		4.95	□□□□□ -1.62
IOC4	YMR044W	MED1	Q12321	566 aa		4.95	□□□□□ -1.62
IOC4	YMR044W	RPS21A	P0C0V8	87 aa	Known RBP	4.94	□□□□□ -1.62
IOC4	YMR044W	PRY1	P47032	299 aa		4.94	□□□□□ -1.62
IOC4	YMR044W	BFA1	P47113	574 aa		4.94	□□□□□ -1.62
IOC4	YMR044W	BNA2	P47125	453 aa		4.94	□□□□□ -1.62
IOC4	YMR044W	GTR1	Q00582	310 aa		4.94	□□□□□ -1.62
IOC4	YMR044W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
IOC4	YMR044W	TRS130	Q03660	1102 aa		4.94	□□□□□ -1.62
IOC4	YMR044W	RSC58	Q07979	502 aa		4.94	□□□□□ -1.62
IOC4	YMR044W	NBA1	Q08229	501 aa	Known RBP	4.94	□□□□□ -1.62
IOC4	YMR044W	RSB1	Q08417	382 aa		4.94	□□□□□ -1.62
IOC4	YMR044W	SVS1	Q12254	260 aa		4.94	□□□□□ -1.62
IOC4	YMR044W	AI1	P03875	834 aa		4.93	□□□□□ -1.62
IOC4	YMR044W	SRO9	P25567	434 aa	Known RBP	4.93	□□□□□ -1.62
IOC4	YMR044W	PET309	P32522	965 aa	Predicted RBP	4.93	□□□□□ -1.62
IOC4	YMR044W	MDL2	P33311	773 aa		4.93	□□□□□ -1.62
IOC4	YMR044W	HXT6	P39003	570 aa	Known RBP	4.93	□□□□□ -1.62
IOC4	YMR044W	HXT7	P39004	570 aa		4.93	□□□□□ -1.62
IOC4	YMR044W	AKR1	P39010	764 aa		4.93	□□□□□ -1.62
IOC4	YMR044W	MMM1	P41800	426 aa		4.93	□□□□□ -1.62
IOC4	YMR044W	RNR4	P49723	345 aa	Known RBP	4.93	□□□□□ -1.62
IOC4	YMR044W	NOG2	P53742	486 aa	Known RBP	4.93	□□□□□ -1.62
IOC4	YMR044W	TEP1	P53916	434 aa		4.93	□□□□□ -1.62
IOC4	YMR044W	HFI1	Q12060	488 aa		4.93	□□□□□ -1.62
IOC4	YMR044W	OSW2	Q12202	724 aa		4.93	□□□□□ -1.62
IOC4	YMR044W	DIF1	O13577	133 aa		4.92	□□□□□ -1.62
IOC4	YMR044W	OPI1	P21957	404 aa		4.92	□□□□□ -1.62
IOC4	YMR044W	RFA1	P22336	621 aa	Known RBP	4.92	□□□□□ -1.62
IOC4	YMR044W	URA1	P28272	314 aa	Predicted RBP	4.92	□□□□□ -1.62
IOC4	YMR044W	IMP2'	P32351	346 aa		4.92	□□□□□ -1.62
IOC4	YMR044W	SER1	P33330	395 aa	Known RBP	4.92	□□□□□ -1.62
IOC4	YMR044W	ECM21	P38167	1117 aa	Known RBP	4.92	□□□□□ -1.62
IOC4	YMR044W	PSY4	P38193	441 aa		4.92	□□□□□ -1.62
IOC4	YMR044W	RLP7	P40693	322 aa	Known RBP	4.92	□□□□□ -1.62
IOC4	YMR044W	SHR5	P41912	237 aa		4.92	□□□□□ -1.62
IOC4	YMR044W	YFL066C	P43538	392 aa		4.92	□□□□□ -1.62
IOC4	YMR044W	ASK10	P48361	1146 aa		4.92	□□□□□ -1.62
IOC4	YMR044W	HOL1	P53389	586 aa		4.92	□□□□□ -1.62
IOC4	YMR044W	TDA6	Q06466	467 aa		4.92	□□□□□ -1.62
IOC4	YMR044W	SNU66	Q12420	587 aa	Predicted RBP	4.92	□□□□□ -1.62
IOC4	YMR044W	RPS21B	Q3E754	87 aa	Known RBP	4.92	□□□□□ -1.62
IOC4	YMR044W	NOT3	P06102	836 aa	Known RBP	4.91	□□□□□ -1.62
IOC4	YMR044W	SEC65	P29478	273 aa		4.91	□□□□□ -1.62
IOC4	YMR044W	RRN3	P36070	627 aa		4.91	□□□□□ -1.62
IOC4	YMR044W	SAP190	P36123	1033 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms