RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C LPX1Q12405 387 aaKnown RBP7.98□□□□□ -1.13
ATG17YLR423C BFA1P47113 574 aa7.97□□□□□ -1.13
ATG17YLR423C MED7Q08278 222 aa7.97□□□□□ -1.13
ATG17YLR423C RMP1Q12530 201 aa7.97□□□□□ -1.13
ATG17YLR423C DID4P36108 232 aa7.96□□□□□ -1.14
ATG17YLR423C YKR051WP36142 418 aa7.96□□□□□ -1.14
ATG17YLR423C DUS1P53759 423 aaKnown RBP7.96□□□□□ -1.14
ATG17YLR423C TRP3P00937 484 aa7.95□□□□□ -1.14
ATG17YLR423C GAL10P04397 699 aa7.95□□□□□ -1.14
ATG17YLR423C SPE1P08432 466 aa7.95□□□□□ -1.14
ATG17YLR423C MIH1P23748 554 aa7.95□□□□□ -1.14
ATG17YLR423C PLC1P32383 869 aa7.95□□□□□ -1.14
ATG17YLR423C ATG19P35193 415 aa7.95□□□□□ -1.14
ATG17YLR423C BNA2P47125 453 aa7.95□□□□□ -1.14
ATG17YLR423C ZIP2P53061 704 aa7.95□□□□□ -1.14
ATG17YLR423C KAR1P11927 433 aa7.94□□□□□ -1.14
ATG17YLR423C HSP78P33416 811 aa7.94□□□□□ -1.14
ATG17YLR423C TOS1P38288 455 aa7.94□□□□□ -1.14
ATG17YLR423C MND2P40577 368 aa7.94□□□□□ -1.14
ATG17YLR423C THI21Q08975 551 aa7.94□□□□□ -1.14
ATG17YLR423C Q0142Q9ZZW4 58 aa7.94□□□□□ -1.14
ATG17YLR423C YEF3P16521 1044 aaKnown RBP7.93□□□□□ -1.14
ATG17YLR423C FLR1P38124 548 aa7.93□□□□□ -1.14
ATG17YLR423C ETP1P38748 585 aaKnown RBP7.93□□□□□ -1.14
ATG17YLR423C RPP2AP05319 106 aaKnown RBP7.92□□□□□ -1.14
ATG17YLR423C CCT5P40413 562 aaKnown RBP7.92□□□□□ -1.14
ATG17YLR423C GTF1P53260 183 aaPredicted RBP7.92□□□□□ -1.14
ATG17YLR423C ORC3P54790 616 aa7.92□□□□□ -1.14
ATG17YLR423C PTA1Q01329 785 aaPredicted RBP7.92□□□□□ -1.14
ATG17YLR423C ECM9Q02202 377 aa7.92□□□□□ -1.14
ATG17YLR423C YHM2Q04013 314 aa7.92□□□□□ -1.14
ATG17YLR423C MPD2Q99316 277 aa7.92□□□□□ -1.14
ATG17YLR423C PEA2P40091 420 aa7.91□□□□□ -1.14
ATG17YLR423C SSY5P47002 699 aa7.91□□□□□ -1.14
ATG17YLR423C NIT2P47016 307 aa7.91□□□□□ -1.14
ATG17YLR423C PBP1P53297 722 aaKnown RBP7.91□□□□□ -1.14
ATG17YLR423C YLR149CQ99296 730 aa7.91□□□□□ -1.14
ATG17YLR423C DAL3P32459 195 aa7.9□□□□□ -1.14
ATG17YLR423C HIR1P32479 840 aa7.9□□□□□ -1.14
ATG17YLR423C YKR018CP36114 725 aa7.9□□□□□ -1.14
ATG17YLR423C YKR073CP36153 106 aa7.9□□□□□ -1.14
ATG17YLR423C YKR075CP36155 307 aa7.9□□□□□ -1.14
ATG17YLR423C MAL31P38156 614 aa7.9□□□□□ -1.14
ATG17YLR423C GPP2P40106 250 aaKnown RBP7.9□□□□□ -1.14
ATG17YLR423C MTR3P48240 250 aaPredicted RBP7.9□□□□□ -1.14
ATG17YLR423C SPC105P53148 917 aa7.9□□□□□ -1.14
ATG17YLR423C ROT1Q03691 256 aa7.9□□□□□ -1.14
ATG17YLR423C TPO1Q07824 586 aa7.9□□□□□ -1.14
ATG17YLR423C YOR378WQ08902 515 aa7.9□□□□□ -1.14
ATG17YLR423C ATP4P05626 244 aa7.89□□□□□ -1.15
ATG17YLR423C SED4P25365 1065 aa7.89□□□□□ -1.15
ATG17YLR423C MNN4P36044 1178 aa7.89□□□□□ -1.15
ATG17YLR423C YHR078WP38799 552 aa7.89□□□□□ -1.15
ATG17YLR423C PCL10P53124 433 aa7.89□□□□□ -1.15
ATG17YLR423C SNO2P53823 222 aa7.89□□□□□ -1.15
ATG17YLR423C YNL034WP53963 612 aa7.89□□□□□ -1.15
ATG17YLR423C YNL018CP53976 612 aa7.89□□□□□ -1.15
ATG17YLR423C YPR027CQ12079 277 aa7.89□□□□□ -1.15
ATG17YLR423C BIT2P38346 545 aa7.88□□□□□ -1.15
ATG17YLR423C PZF1P39933 429 aa7.88□□□□□ -1.15
ATG17YLR423C GPD1Q00055 391 aaKnown RBP7.88□□□□□ -1.15
ATG17YLR423C SGD1Q06132 899 aa7.88□□□□□ -1.15
ATG17YLR423C WHI4Q07655 649 aaKnown RBP7.88□□□□□ -1.15
ATG17YLR423C SST2P11972 698 aaKnown RBP7.87□□□□□ -1.15
ATG17YLR423C LIP5P32875 414 aa7.87□□□□□ -1.15
ATG17YLR423C CTF8P38877 133 aa7.87□□□□□ -1.15
ATG17YLR423C EMP65P40085 556 aa7.87□□□□□ -1.15
ATG17YLR423C SDP1P40479 209 aa7.87□□□□□ -1.15
ATG17YLR423C CCT8P47079 568 aaKnown RBP7.87□□□□□ -1.15
ATG17YLR423C SLD3P53135 668 aa7.87□□□□□ -1.15
ATG17YLR423C ORC4P54791 529 aa7.87□□□□□ -1.15
ATG17YLR423C SKY1Q03656 742 aa7.87□□□□□ -1.15
ATG17YLR423C PHM6Q05637 104 aa7.87□□□□□ -1.15
ATG17YLR423C FBP1P09201 348 aa7.86□□□□□ -1.15
ATG17YLR423C SAK1P38990 1142 aa7.86□□□□□ -1.15
ATG17YLR423C GCV2P49095 1034 aa7.86□□□□□ -1.15
ATG17YLR423C TGL2P54857 326 aa7.86□□□□□ -1.15
ATG17YLR423C VMS1Q04311 632 aaKnown RBP7.86□□□□□ -1.15
ATG17YLR423C HCA4P20448 770 aaKnown RBP7.85□□□□□ -1.15
ATG17YLR423C SEC65P29478 273 aa7.85□□□□□ -1.15
ATG17YLR423C RPS21BQ3E754 87 aaKnown RBP7.85□□□□□ -1.15
ATG17YLR423C COX11P19516 300 aaKnown RBP7.84□□□□□ -1.15
ATG17YLR423C NIC96P34077 839 aa7.84□□□□□ -1.15
ATG17YLR423C PMC1P38929 1173 aaPredicted RBP7.84□□□□□ -1.15
ATG17YLR423C RNR4P49723 345 aaKnown RBP7.84□□□□□ -1.15
ATG17YLR423C SUB1P54000 292 aaKnown RBP7.84□□□□□ -1.15
ATG17YLR423C BRE4Q07660 1125 aa7.84□□□□□ -1.15
ATG17YLR423C HFI1Q12060 488 aa7.84□□□□□ -1.15
ATG17YLR423C DCS2Q12123 353 aa7.84□□□□□ -1.15
ATG17YLR423C RPS21AP0C0V8 87 aaKnown RBP7.83□□□□□ -1.16
ATG17YLR423C NGG1P32494 702 aa7.83□□□□□ -1.16
ATG17YLR423C PUB1P32588 453 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16not detected
ATG17YLR423C OAF3P36023 863 aa7.83□□□□□ -1.16
ATG17YLR423C LAM1P38851 1228 aa7.83□□□□□ -1.16
ATG17YLR423C HXT6P39003 570 aaKnown RBP7.83□□□□□ -1.16
ATG17YLR423C HXT7P39004 570 aa7.83□□□□□ -1.16
ATG17YLR423C MET12P46151 657 aa7.83□□□□□ -1.16
ATG17YLR423C TAN1P53072 289 aaPredicted RBP7.83□□□□□ -1.16
ATG17YLR423C YBP2P53169 641 aa7.83□□□□□ -1.16
ATG17YLR423C PLB2Q03674 706 aa7.83□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms