RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeastyeast

Gene NMD4, Length 657 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD4YLR363C ERT1P38140 529 aa6.78□□□□□ -1.32
NMD4YLR363C OCA5P38738 679 aa6.78□□□□□ -1.32
NMD4YLR363C YAP3P38749 330 aa6.78□□□□□ -1.32
NMD4YLR363C IOC3P43596 787 aa6.78□□□□□ -1.32
NMD4YLR363C VPS30Q02948 557 aa6.78□□□□□ -1.32
NMD4YLR363C TAF8Q03750 510 aa6.78□□□□□ -1.32
NMD4YLR363C PLB1P39105 664 aa6.77□□□□□ -1.33
NMD4YLR363C RSP5P39940 809 aaKnown RBP6.77□□□□□ -1.33
NMD4YLR363C URM1P40554 99 aaPredicted RBP6.77□□□□□ -1.33
NMD4YLR363C MNN10P50108 393 aaKnown RBP6.77□□□□□ -1.33
NMD4YLR363C TMA10Q06177 86 aa6.77□□□□□ -1.33
NMD4YLR363C YOR131CQ12486 218 aa6.77□□□□□ -1.33
NMD4YLR363C DNF3Q12674 1656 aa6.77□□□□□ -1.33
NMD4YLR363C TOP3P13099 656 aa6.76□□□□□ -1.33
NMD4YLR363C RFA1P22336 621 aaKnown RBP6.76□□□□□ -1.33
NMD4YLR363C CTS1P29029 562 aa6.76□□□□□ -1.33
NMD4YLR363C SRP40P32583 406 aaPredicted RBP6.76□□□□□ -1.33
NMD4YLR363C STE13P33894 931 aa6.76□□□□□ -1.33
NMD4YLR363C SHM2P37291 469 aaKnown RBP6.76□□□□□ -1.33
NMD4YLR363C MCM6P53091 1017 aaKnown RBP6.76□□□□□ -1.33
NMD4YLR363C BNR1P40450 1375 aa6.76□□□□□ -1.33
NMD4YLR363C YSP2Q06681 1438 aa6.76□□□□□ -1.33
NMD4YLR363C GAL11P19659 1081 aa6.75□□□□□ -1.33
NMD4YLR363C UBP6P43593 499 aaKnown RBP6.75□□□□□ -1.33
NMD4YLR363C URN1Q06525 465 aaKnown RBP6.75□□□□□ -1.33
NMD4YLR363C CAN1P04817 590 aa6.74□□□□□ -1.33
NMD4YLR363C TY3B-GQ99315 1547 aa6.74□□□□□ -1.33
NMD4YLR363C SEC7P11075 2009 aaKnown RBP6.74□□□□□ -1.33
NMD4YLR363C TOM70P07213 617 aaKnown RBP6.73□□□□□ -1.33
NMD4YLR363C WHI4Q07655 649 aaKnown RBP6.73□□□□□ -1.33
NMD4YLR363C BET3P36149 193 aa6.72□□□□□ -1.33
NMD4YLR363C NCS6P53088 359 aa6.72□□□□□ -1.33
NMD4YLR363C ENV7Q12003 364 aa6.72□□□□□ -1.33
NMD4YLR363C KCS1Q12494 1050 aa6.72□□□□□ -1.33
NMD4YLR363C YBT1P32386 1661 aa6.71□□□□□ -1.33
NMD4YLR363C MPH2P0CD99 609 aa6.71□□□□□ -1.34
NMD4YLR363C YKL091CP33324 310 aaKnown RBP6.71□□□□□ -1.34
NMD4YLR363C CHZ1P40019 153 aaPredicted RBP6.71□□□□□ -1.34
NMD4YLR363C NIT3P49954 291 aa6.71□□□□□ -1.34
NMD4YLR363C UPC2Q12151 913 aa6.71□□□□□ -1.34
NMD4YLR363C NPC2Q12408 173 aa6.71□□□□□ -1.34
NMD4YLR363C SED4P25365 1065 aa6.7□□□□□ -1.34
NMD4YLR363C URA1P28272 314 aaPredicted RBP6.7□□□□□ -1.34
NMD4YLR363C TYE7P33122 291 aaPredicted RBP6.7□□□□□ -1.34
NMD4YLR363C CEP3P40969 608 aa6.7□□□□□ -1.34
NMD4YLR363C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
NMD4YLR363C RTA1P53047 317 aa6.7□□□□□ -1.34
NMD4YLR363C MAK10Q02197 733 aa6.7□□□□□ -1.34
NMD4YLR363C RPN4Q03465 531 aa6.7□□□□□ -1.34
NMD4YLR363C SSL1Q04673 461 aaPredicted RBP6.7□□□□□ -1.34
NMD4YLR363C HCM1P25364 564 aa6.69□□□□□ -1.34
NMD4YLR363C DCG1P32460 244 aa6.69□□□□□ -1.34
NMD4YLR363C YIL108WP40483 696 aaKnown RBP6.69□□□□□ -1.34
NMD4YLR363C EXG2P52911 562 aa6.69□□□□□ -1.34
NMD4YLR363C HDA1P53973 706 aa6.69□□□□□ -1.34
NMD4YLR363C YKR011CQ02209 353 aa6.69□□□□□ -1.34
NMD4YLR363C RPS9AO13516 197 aaKnown RBP6.68□□□□□ -1.34
NMD4YLR363C FBP1P09201 348 aa6.68□□□□□ -1.34
NMD4YLR363C RPD3P32561 433 aa6.68□□□□□ -1.34
NMD4YLR363C DAM1P53267 343 aa6.68□□□□□ -1.34
NMD4YLR363C PPM2Q08282 695 aa6.68□□□□□ -1.34
NMD4YLR363C GUP2Q08929 609 aa6.68□□□□□ -1.34
NMD4YLR363C STE14P32584 239 aa6.67□□□□□ -1.34
NMD4YLR363C EMC3P36039 253 aa6.67□□□□□ -1.34
NMD4YLR363C ALG2P43636 503 aa6.67□□□□□ -1.34
NMD4YLR363C YGR283CP53336 341 aaPredicted RBP6.67□□□□□ -1.34
NMD4YLR363C NOG2P53742 486 aaKnown RBP6.67□□□□□ -1.34
NMD4YLR363C SRB8P25648 1427 aa6.67□□□□□ -1.34
NMD4YLR363C HAP1P0CE41 1502 aa6.66□□□□□ -1.34
NMD4YLR363C PMA1P05030 918 aaKnown RBP6.66□□□□□ -1.34
NMD4YLR363C ENB1Q08299 606 aa6.66□□□□□ -1.34
NMD4YLR363C NTO1Q12311 748 aa6.66□□□□□ -1.34
NMD4YLR363C PBP2P38151 413 aaKnown RBP RIP-Chip data6.65□□□□□ -1.34not detected
NMD4YLR363C SDP1P40479 209 aa6.65□□□□□ -1.34
NMD4YLR363C GYP8P43570 497 aa6.65□□□□□ -1.34
NMD4YLR363C KAR4P25583 335 aa6.64□□□□□ -1.35
NMD4YLR363C CYS3P31373 394 aaKnown RBP6.64□□□□□ -1.35
NMD4YLR363C TRM2P33753 639 aa6.64□□□□□ -1.35
NMD4YLR363C BUD6P41697 788 aa6.64□□□□□ -1.35
NMD4YLR363C PUS2P53167 370 aa6.64□□□□□ -1.35
NMD4YLR363C GSF2Q04697 403 aaKnown RBP6.64□□□□□ -1.35
NMD4YLR363C TUB2P02557 457 aaKnown RBP6.63□□□□□ -1.35
NMD4YLR363C PHR1P05066 565 aaKnown RBP RIP-Chip data6.63□□□□□ -1.35not detected
NMD4YLR363C PFK1P16861 987 aaKnown RBP6.63□□□□□ -1.35
NMD4YLR363C DAL7P21826 554 aa6.63□□□□□ -1.35
NMD4YLR363C CTF8P38877 133 aa6.63□□□□□ -1.35
NMD4YLR363C PHO23P50947 330 aa6.63□□□□□ -1.35
NMD4YLR363C REH1Q06709 432 aa6.63□□□□□ -1.35
NMD4YLR363C PMI40P29952 429 aaKnown RBP6.62□□□□□ -1.35
NMD4YLR363C YDR514CQ04408 483 aa6.62□□□□□ -1.35
NMD4YLR363C ERR1P0CX10 437 aa6.61□□□□□ -1.35
NMD4YLR363C ERR2P0CX11 437 aa6.61□□□□□ -1.35
NMD4YLR363C CAD1P24813 409 aaKnown RBP6.61□□□□□ -1.35
NMD4YLR363C TIM23P32897 222 aa6.61□□□□□ -1.35
NMD4YLR363C GDH3P39708 457 aa6.61□□□□□ -1.35
NMD4YLR363C OSW7P43611 510 aa6.61□□□□□ -1.35
NMD4YLR363C TAD1P53065 400 aa6.61□□□□□ -1.35
NMD4YLR363C ATP25Q03153 612 aa6.61□□□□□ -1.35
NMD4YLR363C SPC29P33419 253 aa6.6□□□□□ -1.35
NMD4YLR363C DEF1P35732 738 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 47.4 ms