RNA–Protein interactions for RNA: YLR261C

VPS63, Transcript of Putative protein of unknown function, yeast

Gene VPS63, Length 327 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS63	YLR261C	KCS1	Q12494	1050 aa		4.05	□□□□□ -1.76
VPS63	YLR261C	Q0142	Q9ZZW4	58 aa		4.05	□□□□□ -1.76
VPS63	YLR261C	SFL1	P20134	766 aa		4.04	□□□□□ -1.76
VPS63	YLR261C	ATG19	P35193	415 aa		4.04	□□□□□ -1.76
VPS63	YLR261C	YHR078W	P38799	552 aa		4.04	□□□□□ -1.76
VPS63	YLR261C	CRP1	P38845	465 aa	Known RBP	4.04	□□□□□ -1.76
VPS63	YLR261C	CTF8	P38877	133 aa		4.04	□□□□□ -1.76
VPS63	YLR261C	SET5	P38890	526 aa	Known RBP	4.04	□□□□□ -1.76
VPS63	YLR261C	SSY5	P47002	699 aa		4.04	□□□□□ -1.76
VPS63	YLR261C	UBC9	P50623	157 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS63	YLR261C	SNP1	Q00916	300 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS63	YLR261C	SLU7	Q02775	382 aa	Known RBP	4.04	□□□□□ -1.76
VPS63	YLR261C	UTP14	Q04500	899 aa	Known RBP	4.04	□□□□□ -1.76
VPS63	YLR261C	NOP12	Q08208	459 aa	Known RBP	4.04	□□□□□ -1.76
VPS63	YLR261C	THI21	Q08975	551 aa		4.04	□□□□□ -1.76
VPS63	YLR261C	NPC2	Q12408	173 aa		4.04	□□□□□ -1.76
VPS63	YLR261C	HMG1	P12683	1054 aa		4.03	□□□□□ -1.76
VPS63	YLR261C	PRP4	P20053	465 aa	Known RBP	4.03	□□□□□ -1.76
VPS63	YLR261C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
VPS63	YLR261C	SEC21	P32074	935 aa	Known RBP	4.03	□□□□□ -1.76
VPS63	YLR261C	HOG1	P32485	435 aa		4.03	□□□□□ -1.76
VPS63	YLR261C	RPN10	P38886	268 aa	Known RBP	4.03	□□□□□ -1.76
VPS63	YLR261C	HLJ1	P48353	224 aa		4.03	□□□□□ -1.76
VPS63	YLR261C	YNR029C	P53729	429 aa	Known RBP	4.03	□□□□□ -1.76
VPS63	YLR261C	ATG33	Q06485	197 aa		4.03	□□□□□ -1.76
VPS63	YLR261C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
VPS63	YLR261C	PCM1	P38628	557 aa	Known RBP	4.02	□□□□□ -1.77
VPS63	YLR261C	SAK1	P38990	1142 aa		4.02	□□□□□ -1.77
VPS63	YLR261C	UBP5	P39944	805 aa		4.02	□□□□□ -1.77
VPS63	YLR261C	ZIP2	P53061	704 aa		4.02	□□□□□ -1.77
VPS63	YLR261C	MCM6	P53091	1017 aa	Known RBP	4.02	□□□□□ -1.77
VPS63	YLR261C	SDA1	P53313	767 aa	Known RBP	4.02	□□□□□ -1.77
VPS63	YLR261C	YLR149C	Q99296	730 aa		4.02	□□□□□ -1.77
VPS63	YLR261C	TUB3	P09734	445 aa	Known RBP	4.01	□□□□□ -1.77
VPS63	YLR261C	CAD1	P24813	409 aa	Known RBP	4.01	□□□□□ -1.77
VPS63	YLR261C	KAR4	P25583	335 aa		4.01	□□□□□ -1.77
VPS63	YLR261C	YKR051W	P36142	418 aa		4.01	□□□□□ -1.77
VPS63	YLR261C	VHR1	P40522	640 aa		4.01	□□□□□ -1.77
VPS63	YLR261C	NPY1	P53164	384 aa		4.01	□□□□□ -1.77
VPS63	YLR261C	NHX1	Q04121	633 aa		4.01	□□□□□ -1.77
VPS63	YLR261C	MUS81	Q04149	632 aa	Predicted RBP	4.01	□□□□□ -1.77
VPS63	YLR261C	THI73	Q07904	523 aa		4.01	□□□□□ -1.77
VPS63	YLR261C	GIN4	Q12263	1142 aa		4.01	□□□□□ -1.77
VPS63	YLR261C	YLR358C	O13565	187 aa		4	□□□□□ -1.77
VPS63	YLR261C	FLR1	P38124	548 aa		4	□□□□□ -1.77
VPS63	YLR261C	MGS1	P40151	587 aa		4	□□□□□ -1.77
VPS63	YLR261C	YFL052W	P43551	465 aa		4	□□□□□ -1.77
VPS63	YLR261C	GUP2	Q08929	609 aa		4	□□□□□ -1.77
VPS63	YLR261C	LAS17	Q12446	633 aa		4	□□□□□ -1.77
VPS63	YLR261C	TSR4	P25040	408 aa		3.99	□□□□□ -1.77
VPS63	YLR261C	TYS1	P36421	394 aa	Known RBP	3.99	□□□□□ -1.77
VPS63	YLR261C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
VPS63	YLR261C	UBP12	P39538	1254 aa		3.99	□□□□□ -1.77
VPS63	YLR261C	PZF1	P39933	429 aa		3.99	□□□□□ -1.77
VPS63	YLR261C	YEN1	P40028	759 aa		3.99	□□□□□ -1.77
VPS63	YLR261C	DOT6	P40059	670 aa	Known RBP	3.99	□□□□□ -1.77
VPS63	YLR261C	PFA3	P42836	336 aa		3.99	□□□□□ -1.77
VPS63	YLR261C	TAF1	P46677	1066 aa		3.99	□□□□□ -1.77
VPS63	YLR261C	EXG2	P52911	562 aa		3.99	□□□□□ -1.77
VPS63	YLR261C	MRPS35	P53292	345 aa		3.99	□□□□□ -1.77
VPS63	YLR261C	CLU1	Q03690	1277 aa	Known RBP	3.99	□□□□□ -1.77
VPS63	YLR261C	PEX19	Q07418	342 aa		3.99	□□□□□ -1.77
VPS63	YLR261C	GUD1	Q07729	489 aa		3.99	□□□□□ -1.77
VPS63	YLR261C	GPR1	Q12361	961 aa		3.99	□□□□□ -1.77
VPS63	YLR261C	SWM1	Q12379	170 aa		3.99	□□□□□ -1.77
VPS63	YLR261C	RPP2A	P05319	106 aa	Known RBP	3.98	□□□□□ -1.77
VPS63	YLR261C	GRX4	P32642	244 aa		3.98	□□□□□ -1.77
VPS63	YLR261C	YEL1	P34225	687 aa		3.98	□□□□□ -1.77
VPS63	YLR261C	HSL7	P38274	827 aa		3.98	□□□□□ -1.77
VPS63	YLR261C	BNA2	P47125	453 aa		3.98	□□□□□ -1.77
VPS63	YLR261C	YJR096W	P47137	282 aa		3.98	□□□□□ -1.77
VPS63	YLR261C	MTR3	P48240	250 aa	Predicted RBP	3.98	□□□□□ -1.77
VPS63	YLR261C	PHO23	P50947	330 aa		3.98	□□□□□ -1.77
VPS63	YLR261C	GPG1	P53130	126 aa		3.98	□□□□□ -1.77
VPS63	YLR261C	ASI2	P53895	289 aa		3.98	□□□□□ -1.77
VPS63	YLR261C	RPN7	Q06103	429 aa	Known RBP	3.98	□□□□□ -1.77
VPS63	YLR261C	NUP145	P49687	1317 aa		3.97	□□□□□ -1.77
VPS63	YLR261C	CCR4	P31384	837 aa	Known RBP	3.97	□□□□□ -1.77
VPS63	YLR261C	SHM2	P37291	469 aa	Known RBP	3.97	□□□□□ -1.77
VPS63	YLR261C	YGR237C	P50089	785 aa		3.97	□□□□□ -1.77
VPS63	YLR261C	MNN10	P50108	393 aa	Known RBP	3.97	□□□□□ -1.77
VPS63	YLR261C	UME1	Q03010	460 aa		3.97	□□□□□ -1.77
VPS63	YLR261C	CTS1	P29029	562 aa		3.96	□□□□□ -1.78
VPS63	YLR261C	PRP19	P32523	503 aa	Known RBP	3.96	□□□□□ -1.78
VPS63	YLR261C	MNN4	P36044	1178 aa		3.96	□□□□□ -1.78
VPS63	YLR261C	RPP1	P38786	293 aa		3.96	□□□□□ -1.78
VPS63	YLR261C	ARP4	P80428	489 aa		3.96	□□□□□ -1.78
VPS63	YLR261C	LEE1	Q02799	301 aa	Known RBP	3.96	□□□□□ -1.78
VPS63	YLR261C	PKH1	Q03407	766 aa		3.96	□□□□□ -1.78
VPS63	YLR261C	MTQ2	Q03920	221 aa	Predicted RBP	3.96	□□□□□ -1.78
VPS63	YLR261C	COG8	Q04632	607 aa		3.96	□□□□□ -1.78
VPS63	YLR261C	ESC8	Q08119	714 aa		3.96	□□□□□ -1.78
VPS63	YLR261C	YLR415C	O13578	112 aa		3.95	□□□□□ -1.78
VPS63	YLR261C	CKB2	P38930	258 aa		3.95	□□□□□ -1.78
VPS63	YLR261C	GPP1	P41277	250 aa	Known RBP	3.95	□□□□□ -1.78
VPS63	YLR261C	FKH2	P41813	862 aa		3.95	□□□□□ -1.78
VPS63	YLR261C	PMT3	P47190	753 aa		3.95	□□□□□ -1.78
VPS63	YLR261C	ERG5	P54781	538 aa		3.95	□□□□□ -1.78
VPS63	YLR261C	TRM13	Q12383	476 aa		3.95	□□□□□ -1.78
VPS63	YLR261C	PFK1	P16861	987 aa	Known RBP	3.94	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 51.2 ms