RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W NCS6P53088 359 aa2.87□□□□□ -1.95
SNU114YKL173W PEX14P53112 341 aa2.87□□□□□ -1.95
SNU114YKL173W YPR071WQ12346 211 aa2.87□□□□□ -1.95
SNU114YKL173W LAS17Q12446 633 aa2.87□□□□□ -1.95
SNU114YKL173W MIH1P23748 554 aa2.87□□□□□ -1.95
SNU114YKL173W CTS1P29029 562 aa2.87□□□□□ -1.95
SNU114YKL173W RPC82P32349 654 aa2.87□□□□□ -1.95
SNU114YKL173W TFC4P33339 1025 aa2.87□□□□□ -1.95
SNU114YKL173W SPC29P33419 253 aa2.87□□□□□ -1.95
SNU114YKL173W GIP4P39732 760 aa2.87□□□□□ -1.95
SNU114YKL173W EXG2P52911 562 aa2.87□□□□□ -1.95
SNU114YKL173W SFB2P53953 876 aa2.87□□□□□ -1.95
SNU114YKL173W ATG16Q03818 150 aa2.87□□□□□ -1.95
SNU114YKL173W YAP6Q03935 383 aa2.87□□□□□ -1.95
SNU114YKL173W BRE1Q07457 700 aaKnown RBP2.87□□□□□ -1.95
SNU114YKL173W TMA7Q3E764 64 aaKnown RBP2.87□□□□□ -1.95
SNU114YKL173W NUP145P49687 1317 aa2.86□□□□□ -1.95
SNU114YKL173W LTE1P07866 1435 aa2.86□□□□□ -1.95
SNU114YKL173W GAL1P04385 528 aa2.86□□□□□ -1.95
SNU114YKL173W HIS5P07172 385 aa2.86□□□□□ -1.95
SNU114YKL173W SST2P11972 698 aaKnown RBP2.86□□□□□ -1.95
SNU114YKL173W DAL3P32459 195 aa2.86□□□□□ -1.95
SNU114YKL173W STE14P32584 239 aa2.86□□□□□ -1.95
SNU114YKL173W MTC2P34246 357 aa2.86□□□□□ -1.95
SNU114YKL173W YKL222CP35995 705 aa2.86□□□□□ -1.95
SNU114YKL173W BUL1P48524 976 aa2.86□□□□□ -1.95
SNU114YKL173W GCV2P49095 1034 aa2.86□□□□□ -1.95
SNU114YKL173W SLU7Q02775 382 aaKnown RBP2.86□□□□□ -1.95
SNU114YKL173W TPO1Q07824 586 aa2.86□□□□□ -1.95
SNU114YKL173W FAP7Q12055 197 aaPredicted RBP2.86□□□□□ -1.95
SNU114YKL173W NKP1Q12493 238 aa2.86□□□□□ -1.95
SNU114YKL173W DSS1P39112 969 aa2.86□□□□□ -1.95
SNU114YKL173W YGR012WP53206 393 aa2.86□□□□□ -1.95
SNU114YKL173W PBP1P53297 722 aaKnown RBP2.86□□□□□ -1.95
SNU114YKL173W CEF1Q03654 590 aaPredicted RBP2.86□□□□□ -1.95
SNU114YKL173W PMA1P05030 918 aaKnown RBP2.85□□□□□ -1.95
SNU114YKL173W TOM70P07213 617 aaKnown RBP2.85□□□□□ -1.95
SNU114YKL173W SFL1P20134 766 aa2.85□□□□□ -1.95
SNU114YKL173W EMC1P25574 760 aa2.85□□□□□ -1.95
SNU114YKL173W YLR224WQ05947 369 aa2.85□□□□□ -1.95
SNU114YKL173W RXT3Q07458 294 aa2.85□□□□□ -1.95
SNU114YKL173W RAD53P22216 821 aa2.85□□□□□ -1.95
SNU114YKL173W PCM1P38628 557 aaKnown RBP2.85□□□□□ -1.95
SNU114YKL173W GPP2P40106 250 aaKnown RBP2.85□□□□□ -1.95
SNU114YKL173W YJR096WP47137 282 aa2.85□□□□□ -1.95
SNU114YKL173W PIP2P52960 996 aa2.85□□□□□ -1.95
SNU114YKL173W SLI1P53304 468 aa2.85□□□□□ -1.95
SNU114YKL173W MET14Q02196 202 aa2.85□□□□□ -1.95
SNU114YKL173W SRP1Q02821 542 aaKnown RBP2.85□□□□□ -1.95
SNU114YKL173W OSW2Q12202 724 aa2.85□□□□□ -1.95
SNU114YKL173W MCD4P36051 919 aa2.85□□□□□ -1.95
SNU114YKL173W VID27P40157 782 aa2.85□□□□□ -1.95
SNU114YKL173W ALG2P43636 503 aa2.85□□□□□ -1.95
SNU114YKL173W DAS1P47005 663 aa2.85□□□□□ -1.95
SNU114YKL173W NIT2P47016 307 aa2.85□□□□□ -1.95
SNU114YKL173W MDG1P53885 366 aa2.85□□□□□ -1.95
SNU114YKL173W YDR338CQ05497 695 aa2.85□□□□□ -1.95
SNU114YKL173W DUS3Q06053 668 aaKnown RBP2.85□□□□□ -1.95
SNU114YKL173W YDR306CQ06640 478 aa2.85□□□□□ -1.95
SNU114YKL173W KCS1Q12494 1050 aa2.85□□□□□ -1.95
SNU114YKL173W PHR1P05066 565 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
SNU114YKL173W SPE1P08432 466 aa2.84□□□□□ -1.95
SNU114YKL173W MPH2P0CD99 609 aa2.84□□□□□ -1.95
SNU114YKL173W ATG19P35193 415 aa2.84□□□□□ -1.95
SNU114YKL173W OAF1P39720 1047 aaPredicted RBP2.84□□□□□ -1.95
SNU114YKL173W SAH1P39954 449 aaKnown RBP2.84□□□□□ -1.95
SNU114YKL173W ZRG8P40021 1076 aa2.84□□□□□ -1.95
SNU114YKL173W TOK1P40310 691 aa2.84□□□□□ -1.95
SNU114YKL173W RSC8P43609 557 aaKnown RBP2.84□□□□□ -1.95
SNU114YKL173W SPT20P50875 604 aa2.84□□□□□ -1.95
SNU114YKL173W YGR283CP53336 341 aaPredicted RBP2.84□□□□□ -1.95
SNU114YKL173W UBX4P54730 416 aa2.84□□□□□ -1.95
SNU114YKL173W ERG5P54781 538 aa2.84□□□□□ -1.95
SNU114YKL173W RAD18P10862 487 aa2.84□□□□□ -1.96
SNU114YKL173W PGI1P12709 554 aaKnown RBP2.84□□□□□ -1.96
SNU114YKL173W SHM2P37291 469 aaKnown RBP2.84□□□□□ -1.96
SNU114YKL173W EXO84P38261 753 aa2.84□□□□□ -1.96
SNU114YKL173W RPT2P40327 437 aaKnown RBP2.84□□□□□ -1.96
SNU114YKL173W CAF16P43569 289 aa2.84□□□□□ -1.96
SNU114YKL173W COG4Q06096 861 aa2.84□□□□□ -1.96
SNU114YKL173W UPC2Q12151 913 aa2.84□□□□□ -1.96
SNU114YKL173W BNI1P41832 1953 aa2.84□□□□□ -1.96
SNU114YKL173W YOR093CQ12275 1648 aa2.83□□□□□ -1.96
SNU114YKL173W CDC48P25694 835 aaKnown RBP2.83□□□□□ -1.96
SNU114YKL173W MPE1P35728 441 aaKnown RBP2.83□□□□□ -1.96
SNU114YKL173W YER158CP40095 573 aa2.83□□□□□ -1.96
SNU114YKL173W HXT16P47185 567 aa2.83□□□□□ -1.96
SNU114YKL173W MNN10P50108 393 aaKnown RBP2.83□□□□□ -1.96
SNU114YKL173W SPC105P53148 917 aa2.83□□□□□ -1.96
SNU114YKL173W TMA64Q04600 565 aaKnown RBP2.83□□□□□ -1.96
SNU114YKL173W RSC3Q06639 885 aa2.83□□□□□ -1.96
SNU114YKL173W PLB1P39105 664 aa2.83□□□□□ -1.96
SNU114YKL173W ERP2P39704 215 aa2.83□□□□□ -1.96
SNU114YKL173W AIM14P53109 570 aa2.83□□□□□ -1.96
SNU114YKL173W LCD1Q04377 747 aa2.83□□□□□ -1.96
SNU114YKL173W HFD1Q04458 532 aa2.83□□□□□ -1.96
SNU114YKL173W HSF1P10961 833 aa2.82□□□□□ -1.96
SNU114YKL173W SER1P33330 395 aaKnown RBP2.82□□□□□ -1.96
SNU114YKL173W DEF1P35732 738 aaKnown RBP2.82□□□□□ -1.96
SNU114YKL173W YHL041WP38730 149 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 101.5 ms