RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C SYF1Q04048 859 aaPredicted RBP2.28□□□□□ -2.04
RTT101YJL047C GSF2Q04697 403 aaKnown RBP2.28□□□□□ -2.04
RTT101YJL047C UTP21Q06078 939 aaPredicted RBP2.28□□□□□ -2.04
RTT101YJL047C GYP1Q08484 637 aa2.28□□□□□ -2.04
RTT101YJL047C MET7Q08645 548 aa2.28□□□□□ -2.04
RTT101YJL047C ENA5Q12691 1091 aa2.28□□□□□ -2.04
RTT101YJL047C SNF1P06782 633 aaKnown RBP2.27□□□□□ -2.05
RTT101YJL047C HCA4P20448 770 aaKnown RBP2.27□□□□□ -2.05
RTT101YJL047C MSH1P25846 959 aa2.27□□□□□ -2.05
RTT101YJL047C MRT4P33201 236 aaKnown RBP2.27□□□□□ -2.05
RTT101YJL047C SEG2P34250 1132 aa2.27□□□□□ -2.05
RTT101YJL047C MTH1P35198 433 aa2.27□□□□□ -2.05
RTT101YJL047C SRP72P38688 640 aaKnown RBP2.27□□□□□ -2.05
RTT101YJL047C TDA3P38758 523 aa2.27□□□□□ -2.05
RTT101YJL047C LAM1P38851 1228 aa2.27□□□□□ -2.05
RTT101YJL047C YHR218WP38899 603 aa2.27□□□□□ -2.05
RTT101YJL047C DLD3P39976 496 aaKnown RBP2.27□□□□□ -2.05
RTT101YJL047C LSM5P40089 93 aaKnown RBP2.27□□□□□ -2.05
RTT101YJL047C LTP1P40347 161 aa2.27□□□□□ -2.05
RTT101YJL047C AXL1P40851 1208 aa2.27□□□□□ -2.05
RTT101YJL047C SLS1P42900 643 aa2.27□□□□□ -2.05
RTT101YJL047C SET2P46995 733 aaKnown RBP2.27□□□□□ -2.05
RTT101YJL047C YML6P51998 286 aa2.27□□□□□ -2.05
RTT101YJL047C YHM2Q04013 314 aa2.27□□□□□ -2.05
RTT101YJL047C UTP5Q04177 643 aaKnown RBP2.27□□□□□ -2.05
RTT101YJL047C COG8Q04632 607 aa2.27□□□□□ -2.05
RTT101YJL047C TFC6Q06339 672 aa2.27□□□□□ -2.05
RTT101YJL047C LAP2Q10740 671 aa2.27□□□□□ -2.05
RTT101YJL047C HFI1Q12060 488 aa2.27□□□□□ -2.05
RTT101YJL047C NUR1Q12066 484 aa2.27□□□□□ -2.05
RTT101YJL047C TAH18Q12181 623 aa2.27□□□□□ -2.05
RTT101YJL047C GLO4Q12320 285 aa2.27□□□□□ -2.05
RTT101YJL047C SMC6Q12749 1114 aa2.27□□□□□ -2.05
RTT101YJL047C ACE2P21192 770 aa2.27□□□□□ -2.05
RTT101YJL047C AMS1P22855 1083 aa2.27□□□□□ -2.05
RTT101YJL047C DBP2P24783 546 aaKnown RBP2.27□□□□□ -2.05
RTT101YJL047C FUN30P31380 1131 aa2.27□□□□□ -2.05
RTT101YJL047C SLC1P33333 303 aa2.27□□□□□ -2.05
RTT101YJL047C OAF3P36023 863 aa2.27□□□□□ -2.05
RTT101YJL047C EMC3P36039 253 aa2.27□□□□□ -2.05
RTT101YJL047C NCL1P38205 684 aaKnown RBP2.27□□□□□ -2.05
RTT101YJL047C EAF5P39995 279 aa2.27□□□□□ -2.05
RTT101YJL047C EMP65P40085 556 aa2.27□□□□□ -2.05
RTT101YJL047C RMD8P43620 662 aa2.27□□□□□ -2.05
RTT101YJL047C ASK10P48361 1146 aa2.27□□□□□ -2.05
RTT101YJL047C RNR4P49723 345 aaKnown RBP2.27□□□□□ -2.05
RTT101YJL047C HNT2P49775 206 aa2.27□□□□□ -2.05
RTT101YJL047C UTP22P53254 1237 aaPredicted RBP2.27□□□□□ -2.05
RTT101YJL047C TIM11P81449 96 aaPredicted RBP2.27□□□□□ -2.05
RTT101YJL047C ATP25Q03153 612 aa2.27□□□□□ -2.05
RTT101YJL047C HOT1Q03213 719 aa2.27□□□□□ -2.05
RTT101YJL047C LCD1Q04377 747 aa2.27□□□□□ -2.05
RTT101YJL047C HEL2Q05580 639 aaKnown RBP2.27□□□□□ -2.05
RTT101YJL047C VID22Q05934 901 aa2.27□□□□□ -2.05
RTT101YJL047C ENV7Q12003 364 aa2.27□□□□□ -2.05
RTT101YJL047C DCS2Q12123 353 aa2.27□□□□□ -2.05
RTT101YJL047C HAL9Q12180 1030 aa2.27□□□□□ -2.05
RTT101YJL047C TY1A-DR3Q12441 440 aa2.27□□□□□ -2.05
RTT101YJL047C RPP2BP02400 110 aaKnown RBP2.26□□□□□ -2.05
RTT101YJL047C LEU1P07264 779 aaKnown RBP2.26□□□□□ -2.05
RTT101YJL047C HOP1P20050 605 aa2.26□□□□□ -2.05
RTT101YJL047C ADP1P25371 1049 aa2.26□□□□□ -2.05
RTT101YJL047C YCL049CP25577 312 aa2.26□□□□□ -2.05
RTT101YJL047C PDC6P26263 563 aaKnown RBP2.26□□□□□ -2.05
RTT101YJL047C SLA1P32790 1244 aa2.26□□□□□ -2.05
RTT101YJL047C ADD66P36040 267 aa2.26□□□□□ -2.05
RTT101YJL047C BYE1P36106 594 aa2.26□□□□□ -2.05
RTT101YJL047C TFA2P36145 328 aa2.26□□□□□ -2.05
RTT101YJL047C ALG3P38179 458 aa2.26□□□□□ -2.05
RTT101YJL047C YBR287WP38355 427 aa2.26□□□□□ -2.05
RTT101YJL047C RRF1P38771 230 aa2.26□□□□□ -2.05
RTT101YJL047C KAP123P40069 1113 aaKnown RBP2.26□□□□□ -2.05
RTT101YJL047C YTA6P40328 754 aa2.26□□□□□ -2.05
RTT101YJL047C RAD26P40352 1085 aa2.26□□□□□ -2.05
RTT101YJL047C JEM1P40358 645 aa2.26□□□□□ -2.05
RTT101YJL047C YIL092WP40497 633 aa2.26□□□□□ -2.05
RTT101YJL047C SMK1P41808 388 aa2.26□□□□□ -2.05
RTT101YJL047C MAD3P47074 515 aa2.26□□□□□ -2.05
RTT101YJL047C MDE1P47095 244 aa2.26□□□□□ -2.05
RTT101YJL047C PPT1P53043 513 aa2.26□□□□□ -2.05
RTT101YJL047C ENV11P53246 860 aa2.26□□□□□ -2.05
RTT101YJL047C ARE2P53629 642 aaKnown RBP2.26□□□□□ -2.05
RTT101YJL047C MFB1Q04922 465 aa2.26□□□□□ -2.05
RTT101YJL047C YDR341CQ05506 607 aaKnown RBP2.26□□□□□ -2.05
RTT101YJL047C TRM8Q12009 286 aa2.26□□□□□ -2.05
RTT101YJL047C GNT1Q12096 491 aa2.26□□□□□ -2.05
RTT101YJL047C ARP7Q12406 477 aa2.26□□□□□ -2.05
RTT101YJL047C RVB2Q12464 471 aaKnown RBP2.26□□□□□ -2.05
RTT101YJL047C CDC16P09798 840 aa2.26□□□□□ -2.05
RTT101YJL047C RED1P14291 827 aa2.26□□□□□ -2.05
RTT101YJL047C GLK1P17709 500 aaKnown RBP2.26□□□□□ -2.05
RTT101YJL047C CDC12P32468 407 aaKnown RBP2.26□□□□□ -2.05
RTT101YJL047C CBF2P32504 956 aa2.26□□□□□ -2.05
RTT101YJL047C APM3P38153 483 aa2.26□□□□□ -2.05
RTT101YJL047C IFA38P38286 347 aa2.26□□□□□ -2.05
RTT101YJL047C YHR202WP38887 602 aa2.26□□□□□ -2.05
RTT101YJL047C PNT1P38969 423 aa2.26□□□□□ -2.05
RTT101YJL047C NPR2P39923 615 aa2.26□□□□□ -2.05
RTT101YJL047C YIL166CP40445 542 aa2.26□□□□□ -2.05
RTT101YJL047C CIT3P43635 486 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 179.3 ms