RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W SPC29P33419 253 aa5.89□□□□□ -1.47
SEC28YIL076W SET5P38890 526 aaKnown RBP5.89□□□□□ -1.47
SEC28YIL076W SAK1P38990 1142 aa5.89□□□□□ -1.47
SEC28YIL076W YMR206WQ03695 313 aa5.89□□□□□ -1.47
SEC28YIL076W MUS81Q04149 632 aaPredicted RBP5.89□□□□□ -1.47
SEC28YIL076W YOR131CQ12486 218 aa5.89□□□□□ -1.47
SEC28YIL076W PPR1P07272 904 aaPredicted RBP5.88□□□□□ -1.47
SEC28YIL076W MET3P08536 511 aa5.88□□□□□ -1.47
SEC28YIL076W ERR1P0CX10 437 aa5.88□□□□□ -1.47
SEC28YIL076W ERR2P0CX11 437 aa5.88□□□□□ -1.47
SEC28YIL076W SRP40P32583 406 aaPredicted RBP5.88□□□□□ -1.47
SEC28YIL076W PZF1P39933 429 aa5.88□□□□□ -1.47
SEC28YIL076W ELO3P40319 345 aa5.88□□□□□ -1.47
SEC28YIL076W ATP25Q03153 612 aa5.88□□□□□ -1.47
SEC28YIL076W DLT1Q04216 342 aa5.88□□□□□ -1.47
SEC28YIL076W RSC3Q06639 885 aa5.88□□□□□ -1.47
SEC28YIL076W THI21Q08975 551 aa5.88□□□□□ -1.47
SEC28YIL076W PER1P25625 357 aa5.87□□□□□ -1.47
SEC28YIL076W PFA3P42836 336 aa5.87□□□□□ -1.47
SEC28YIL076W TY4A-JP47023 414 aa5.87□□□□□ -1.47
SEC28YIL076W OMS1Q06668 471 aa5.87□□□□□ -1.47
SEC28YIL076W FRE5Q08908 694 aa5.87□□□□□ -1.47
SEC28YIL076W YBR182C-AQ8TGU6 64 aa5.87□□□□□ -1.47
SEC28YIL076W YKL091CP33324 310 aaKnown RBP5.86□□□□□ -1.47
SEC28YIL076W OCA5P38738 679 aa5.86□□□□□ -1.47
SEC28YIL076W GDH3P39708 457 aa5.86□□□□□ -1.47
SEC28YIL076W SHR5P41912 237 aa5.86□□□□□ -1.47
SEC28YIL076W MUP1P50276 574 aa5.86□□□□□ -1.47
SEC28YIL076W UBA2P52488 636 aa5.86□□□□□ -1.47
SEC28YIL076W TAD3Q9URQ3 322 aa5.86□□□□□ -1.47
SEC28YIL076W CAF20P12962 161 aaKnown RBP5.85□□□□□ -1.47
SEC28YIL076W NGG1P32494 702 aa5.85□□□□□ -1.47
SEC28YIL076W CHZ1P40019 153 aaPredicted RBP5.85□□□□□ -1.47
SEC28YIL076W RLP7P40693 322 aaKnown RBP5.85□□□□□ -1.47
SEC28YIL076W HXT16P47185 567 aa5.85□□□□□ -1.47
SEC28YIL076W MUK1Q02866 612 aa5.85□□□□□ -1.47
SEC28YIL076W DIF1O13577 133 aa5.84□□□□□ -1.47
SEC28YIL076W YLR415CO13578 112 aa5.84□□□□□ -1.47
SEC28YIL076W TIM23P32897 222 aa5.84□□□□□ -1.47
SEC28YIL076W PBP2P38151 413 aaKnown RBP RIP-Chip data5.84□□□□□ -1.47not detected
SEC28YIL076W STB4P50104 949 aa5.84□□□□□ -1.47
SEC28YIL076W NRG1Q03125 231 aa5.84□□□□□ -1.47
SEC28YIL076W RPN4Q03465 531 aa5.84□□□□□ -1.47
SEC28YIL076W ASM4Q05166 528 aa5.84□□□□□ -1.47
SEC28YIL076W MCH5Q08777 521 aa5.84□□□□□ -1.47
SEC28YIL076W ALY2P47029 1046 aa5.83□□□□□ -1.48
SEC28YIL076W HSV2P50079 448 aaPredicted RBP5.83□□□□□ -1.48
SEC28YIL076W MAL11P53048 616 aa5.83□□□□□ -1.48
SEC28YIL076W GPR1Q12361 961 aa5.83□□□□□ -1.48
SEC28YIL076W PPS1P38148 807 aa5.82□□□□□ -1.48
SEC28YIL076W YBR053CP38235 358 aa5.82□□□□□ -1.48
SEC28YIL076W ZDS1P50111 915 aaKnown RBP5.82□□□□□ -1.48
SEC28YIL076W ZIP2P53061 704 aa5.82□□□□□ -1.48
SEC28YIL076W CRR1Q05790 422 aa5.82□□□□□ -1.48
SEC28YIL076W ADY4Q05955 493 aa5.82□□□□□ -1.48
SEC28YIL076W ACF2Q12168 779 aa5.82□□□□□ -1.48
SEC28YIL076W SIC1P38634 284 aa5.81□□□□□ -1.48
SEC28YIL076W MTR3P48240 250 aaPredicted RBP5.81□□□□□ -1.48
SEC28YIL076W TIM44Q01852 431 aa5.81□□□□□ -1.48
SEC28YIL076W TMN2Q04562 672 aa5.81□□□□□ -1.48
SEC28YIL076W YDR338CQ05497 695 aa5.81□□□□□ -1.48
SEC28YIL076W TGL5Q12043 749 aa5.8□□□□□ -1.48
SEC28YIL076W BUD6P41697 788 aa5.79□□□□□ -1.48
SEC28YIL076W YJL163CP46996 555 aa5.79□□□□□ -1.48
SEC28YIL076W AMA1P50082 593 aa5.79□□□□□ -1.48
SEC28YIL076W MTC2P34246 357 aa5.78□□□□□ -1.48
SEC28YIL076W NUP82P40368 713 aa5.78□□□□□ -1.48
SEC28YIL076W YIR042CP40586 236 aa5.78□□□□□ -1.48
SEC28YIL076W GIS1Q03833 894 aa5.78□□□□□ -1.48
SEC28YIL076W MCD4P36051 919 aa5.77□□□□□ -1.49
SEC28YIL076W DAS1P47005 663 aa5.77□□□□□ -1.49
SEC28YIL076W HBT1Q07653 1046 aaKnown RBP5.77□□□□□ -1.49
SEC28YIL076W IRC13Q08630 104 aa5.77□□□□□ -1.49
SEC28YIL076W YHL017WP38745 532 aa5.76□□□□□ -1.49
SEC28YIL076W GND2P53319 492 aa5.76□□□□□ -1.49
SEC28YIL076W MDM12Q92328 271 aa5.76□□□□□ -1.49
SEC28YIL076W CDC9P04819 755 aa5.75□□□□□ -1.49
SEC28YIL076W LAT1P12695 482 aaKnown RBP5.75□□□□□ -1.49
SEC28YIL076W YLR125WQ12138 136 aa5.75□□□□□ -1.49
SEC28YIL076W PHO8P11491 566 aa5.74□□□□□ -1.49
SEC28YIL076W MEF1P25039 761 aa5.74□□□□□ -1.49
SEC28YIL076W STO1P34160 861 aaKnown RBP5.74□□□□□ -1.49
SEC28YIL076W MTH1P35198 433 aa5.74□□□□□ -1.49
SEC28YIL076W YBR259WP38338 688 aa5.74□□□□□ -1.49
SEC28YIL076W DSS1P39112 969 aa5.74□□□□□ -1.49
SEC28YIL076W SDS3P40505 327 aa5.74□□□□□ -1.49
SEC28YIL076W IRC10Q08118 586 aa5.74□□□□□ -1.49
SEC28YIL076W YLR149CQ99296 730 aa5.74□□□□□ -1.49
SEC28YIL076W SPC42P36094 363 aa5.73□□□□□ -1.49
SEC28YIL076W HOS4P40480 1083 aa5.73□□□□□ -1.49
SEC28YIL076W YFL052WP43551 465 aa5.73□□□□□ -1.49
SEC28YIL076W STU2P46675 888 aa5.73□□□□□ -1.49
SEC28YIL076W YBP2P53169 641 aa5.73□□□□□ -1.49
SEC28YIL076W TEX1P53851 422 aaKnown RBP5.73□□□□□ -1.49
SEC28YIL076W GAD1Q04792 585 aa5.73□□□□□ -1.49
SEC28YIL076W Q0142Q9ZZW4 58 aa5.73□□□□□ -1.49
SEC28YIL076W GSY1P23337 708 aa5.72□□□□□ -1.49
SEC28YIL076W VBA3P25594 458 aa5.72□□□□□ -1.49
SEC28YIL076W HIS7P33734 552 aaKnown RBP5.72□□□□□ -1.49
SEC28YIL076W BCD1P38772 366 aa5.72□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 46.9 ms