RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W YOR022CQ12204 715 aa5.38□□□□□ -1.55
VPS29YHR012W PKH2Q12236 1081 aaKnown RBP5.38□□□□□ -1.55
VPS29YHR012W TUF1P02992 437 aaKnown RBP5.37□□□□□ -1.55
VPS29YHR012W HMG2P12684 1045 aa5.37□□□□□ -1.55
VPS29YHR012W ALG1P16661 449 aa5.37□□□□□ -1.55
VPS29YHR012W RAD27P26793 382 aa5.37□□□□□ -1.55
VPS29YHR012W RPT1P33299 467 aaKnown RBP5.37□□□□□ -1.55
VPS29YHR012W MNR2P35724 969 aa5.37□□□□□ -1.55
VPS29YHR012W RGD1P38339 666 aa5.37□□□□□ -1.55
VPS29YHR012W SIP3P38717 1229 aa5.37□□□□□ -1.55
VPS29YHR012W SNF7P39929 240 aaKnown RBP5.37□□□□□ -1.55
VPS29YHR012W CUL3P53202 744 aa5.37□□□□□ -1.55
VPS29YHR012W CAF130P53280 1122 aaPredicted RBP5.37□□□□□ -1.55
VPS29YHR012W TPO2P53283 614 aa5.37□□□□□ -1.55
VPS29YHR012W BIO5P53744 561 aaKnown RBP5.37□□□□□ -1.55
VPS29YHR012W YNL146WP53906 100 aa5.37□□□□□ -1.55
VPS29YHR012W IRC10Q08118 586 aa5.37□□□□□ -1.55
VPS29YHR012W RRD2Q12461 358 aa5.37□□□□□ -1.55
VPS29YHR012W FOB1O13329 566 aa5.36□□□□□ -1.55
VPS29YHR012W HXK1P04806 485 aaKnown RBP5.36□□□□□ -1.55
VPS29YHR012W PGI1P12709 554 aaKnown RBP5.36□□□□□ -1.55
VPS29YHR012W APE1P14904 514 aa5.36□□□□□ -1.55
VPS29YHR012W VPS1P21576 704 aaKnown RBP5.36□□□□□ -1.55
VPS29YHR012W LSB6P42951 607 aa5.36□□□□□ -1.55
VPS29YHR012W MNP1P53163 194 aaPredicted RBP5.36□□□□□ -1.55
VPS29YHR012W PIL1P53252 339 aaKnown RBP5.36□□□□□ -1.55
VPS29YHR012W TUB4P53378 473 aa5.36□□□□□ -1.55
VPS29YHR012W ALG11P53954 548 aaKnown RBP5.36□□□□□ -1.55
VPS29YHR012W CUR1Q06469 252 aa5.36□□□□□ -1.55
VPS29YHR012W ADE4P04046 510 aaKnown RBP5.35□□□□□ -1.55
VPS29YHR012W RPL19AP0CX82 189 aaKnown RBP5.35□□□□□ -1.55
VPS29YHR012W RPL19BP0CX83 189 aaPredicted RBP5.35□□□□□ -1.55
VPS29YHR012W PUP3P25451 205 aaKnown RBP5.35□□□□□ -1.55
VPS29YHR012W NAM7P30771 971 aaKnown RBP5.35□□□□□ -1.55
VPS29YHR012W CYS3P31373 394 aaKnown RBP5.35□□□□□ -1.55
VPS29YHR012W HMT1P38074 348 aa5.35□□□□□ -1.55
VPS29YHR012W RFC5P38251 354 aa5.35□□□□□ -1.55
VPS29YHR012W MMS4P38257 691 aa5.35□□□□□ -1.55
VPS29YHR012W VID24P38263 362 aa5.35□□□□□ -1.55
VPS29YHR012W HXT5P38695 592 aa5.35□□□□□ -1.55
VPS29YHR012W RIM4P38741 713 aa5.35□□□□□ -1.55
VPS29YHR012W ULP2P40537 1034 aaPredicted RBP5.35□□□□□ -1.55
VPS29YHR012W YIR016WP40572 265 aa5.35□□□□□ -1.55
VPS29YHR012W MAF1P41910 395 aa5.35□□□□□ -1.55
VPS29YHR012W SCD6P45978 349 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55 RIP-Chip
VPS29YHR012W AVT1P47082 602 aa5.35□□□□□ -1.55
VPS29YHR012W CTF18P49956 741 aa5.35□□□□□ -1.55
VPS29YHR012W NUT1P53114 1132 aa5.35□□□□□ -1.55
VPS29YHR012W CWC21Q03375 135 aaKnown RBP5.35□□□□□ -1.55
VPS29YHR012W RCR2Q03446 210 aaKnown RBP5.35□□□□□ -1.55
VPS29YHR012W AGE1Q04412 482 aa5.35□□□□□ -1.55
VPS29YHR012W ELG1Q12050 791 aa5.35□□□□□ -1.55
VPS29YHR012W DCS2Q12123 353 aa5.35□□□□□ -1.55
VPS29YHR012W REC8Q12188 680 aa5.35□□□□□ -1.55
VPS29YHR012W TOR1P35169 2470 aa5.35□□□□□ -1.55
VPS29YHR012W TOM70P07213 617 aaKnown RBP5.34□□□□□ -1.55
VPS29YHR012W MAS1P10507 462 aa5.34□□□□□ -1.55
VPS29YHR012W PCK1P10963 549 aa5.34□□□□□ -1.55
VPS29YHR012W SSB1P11484 613 aaKnown RBP5.34□□□□□ -1.55
VPS29YHR012W PFK1P16861 987 aaKnown RBP5.34□□□□□ -1.55
VPS29YHR012W VPS3P23643 1011 aa5.34□□□□□ -1.55
VPS29YHR012W HEL1P36113 551 aa5.34□□□□□ -1.55
VPS29YHR012W PIH1P38768 344 aa5.34□□□□□ -1.55
VPS29YHR012W YER186CP40101 306 aa5.34□□□□□ -1.55
VPS29YHR012W SSB2P40150 613 aaKnown RBP5.34□□□□□ -1.55
VPS29YHR012W ENT3P47160 408 aa5.34□□□□□ -1.55
VPS29YHR012W VTC3Q02725 835 aa5.34□□□□□ -1.55
VPS29YHR012W SYH1Q02875 849 aaKnown RBP5.34□□□□□ -1.55
VPS29YHR012W OPT2Q06593 877 aa5.34□□□□□ -1.55
VPS29YHR012W PLP2Q12017 286 aa5.34□□□□□ -1.55
VPS29YHR012W PUS1Q12211 544 aaKnown RBP5.34□□□□□ -1.55
VPS29YHR012W OSH2Q12451 1283 aa5.34□□□□□ -1.55
VPS29YHR012W CCH1P50077 2039 aa5.33□□□□□ -1.56
VPS29YHR012W SPE1P08432 466 aa5.33□□□□□ -1.56
VPS29YHR012W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
VPS29YHR012W MCM3P24279 971 aaKnown RBP5.33□□□□□ -1.56
VPS29YHR012W PGS1P25578 521 aa5.33□□□□□ -1.56
VPS29YHR012W YSC83P32792 385 aa5.33□□□□□ -1.56
VPS29YHR012W TRM2P33753 639 aa5.33□□□□□ -1.56
VPS29YHR012W GCS1P35197 352 aa5.33□□□□□ -1.56
VPS29YHR012W SIP5P40210 489 aaKnown RBP5.33□□□□□ -1.56
VPS29YHR012W THI6P41835 540 aa5.33□□□□□ -1.56
VPS29YHR012W DAK2P43550 591 aa5.33□□□□□ -1.56
VPS29YHR012W YGR153WP48238 217 aa5.33□□□□□ -1.56
VPS29YHR012W UBA2P52488 636 aa5.33□□□□□ -1.56
VPS29YHR012W KXD1P53158 218 aa5.33□□□□□ -1.56
VPS29YHR012W LEE1Q02799 301 aaKnown RBP5.33□□□□□ -1.56
VPS29YHR012W TRS130Q03660 1102 aa5.33□□□□□ -1.56
VPS29YHR012W NSE5Q03718 556 aa5.33□□□□□ -1.56
VPS29YHR012W ADY4Q05955 493 aa5.33□□□□□ -1.56
VPS29YHR012W SGO1Q08490 590 aa5.33□□□□□ -1.56
VPS29YHR012W SGT2Q12118 346 aaKnown RBP5.33□□□□□ -1.56
VPS29YHR012W YPL150WQ12152 901 aa5.33□□□□□ -1.56
VPS29YHR012W COX4P04037 155 aa5.32□□□□□ -1.56
VPS29YHR012W YEL076C-AP0CX16 216 aa5.32□□□□□ -1.56
VPS29YHR012W YLR464WP0CX17 216 aa5.32□□□□□ -1.56
VPS29YHR012W PRR1P28708 518 aa5.32□□□□□ -1.56
VPS29YHR012W MNN4P36044 1178 aa5.32□□□□□ -1.56
VPS29YHR012W PET10P36139 283 aa5.32□□□□□ -1.56
VPS29YHR012W PGM2P37012 569 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms