RNA–Protein interactions for RNA: YHL035C

VMR1, Transcript of Vacuolar membrane protein, yeastyeast

Gene VMR1, Length 4,779 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMR1YHL035C PHR1P05066 565 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
VMR1YHL035C BEM4P39011 633 aa2.48□□□□□ -2.01
VMR1YHL035C GPP1P41277 250 aaKnown RBP2.48□□□□□ -2.01
VMR1YHL035C NIT2P47016 307 aa2.48□□□□□ -2.01
VMR1YHL035C TAD1P53065 400 aa2.48□□□□□ -2.01
VMR1YHL035C SFB2P53953 876 aa2.48□□□□□ -2.01
VMR1YHL035C RXT3Q07458 294 aa2.48□□□□□ -2.01
VMR1YHL035C ACO1P19414 778 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
VMR1YHL035C PRE10P21242 288 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
VMR1YHL035C YPT7P32939 208 aa2.48□□□□□ -2.01
VMR1YHL035C POA1P38218 177 aa2.48□□□□□ -2.01
VMR1YHL035C DSS1P39112 969 aa2.48□□□□□ -2.01
VMR1YHL035C SDA1P53313 767 aaKnown RBP2.48□□□□□ -2.01
VMR1YHL035C GUD1Q07729 489 aa2.48□□□□□ -2.01
VMR1YHL035C TRM11Q12463 433 aa2.48□□□□□ -2.01
VMR1YHL035C ADR1P07248 1323 aa2.48□□□□□ -2.01
VMR1YHL035C GAL10P04397 699 aa2.48□□□□□ -2.01
VMR1YHL035C MEF2P39677 819 aa2.48□□□□□ -2.01
VMR1YHL035C PCL10P53124 433 aa2.48□□□□□ -2.01
VMR1YHL035C DUS1P53759 423 aaKnown RBP2.48□□□□□ -2.01
VMR1YHL035C MCA1Q08601 432 aa2.48□□□□□ -2.01
VMR1YHL035C TRE2Q08693 809 aa2.48□□□□□ -2.01
VMR1YHL035C CDC20P26309 610 aa2.47□□□□□ -2.01
VMR1YHL035C PRP45P28004 379 aaPredicted RBP2.47□□□□□ -2.01
VMR1YHL035C YBR259WP38338 688 aa2.47□□□□□ -2.01
VMR1YHL035C PRP43P53131 767 aaKnown RBP2.47□□□□□ -2.01
VMR1YHL035C NSE5Q03718 556 aa2.47□□□□□ -2.01
VMR1YHL035C YDR338CQ05497 695 aa2.47□□□□□ -2.01
VMR1YHL035C ACK1Q07622 623 aaPredicted RBP2.47□□□□□ -2.01
VMR1YHL035C GPB1Q08886 897 aa2.47□□□□□ -2.01
VMR1YHL035C MRPL22P53881 309 aa2.47□□□□□ -2.01
VMR1YHL035C HLR1Q04429 423 aa2.47□□□□□ -2.01
VMR1YHL035C CDA2Q06703 312 aa2.47□□□□□ -2.01
VMR1YHL035C SWI6P09959 803 aa2.47□□□□□ -2.01
VMR1YHL035C APL2P36000 726 aaPredicted RBP2.47□□□□□ -2.01
VMR1YHL035C YHR078WP38799 552 aa2.47□□□□□ -2.01
VMR1YHL035C DAL7P21826 554 aa2.46□□□□□ -2.01
VMR1YHL035C SSZ1P38788 538 aaKnown RBP2.46□□□□□ -2.01
VMR1YHL035C ALY2P47029 1046 aa2.46□□□□□ -2.01
VMR1YHL035C COG6P53959 839 aa2.46□□□□□ -2.01
VMR1YHL035C ERG5P54781 538 aa2.46□□□□□ -2.01
VMR1YHL035C YPR196WQ06595 470 aa2.46□□□□□ -2.01
VMR1YHL035C CLF1Q12309 687 aaPredicted RBP2.46□□□□□ -2.01
VMR1YHL035C CYC1P00044 109 aaPredicted RBP2.46□□□□□ -2.02
VMR1YHL035C HMG1P12683 1054 aa2.46□□□□□ -2.02
VMR1YHL035C TSR4P25040 408 aa2.46□□□□□ -2.02
VMR1YHL035C RRP8P38961 392 aaKnown RBP2.46□□□□□ -2.02
VMR1YHL035C OAF1P39720 1047 aaPredicted RBP2.46□□□□□ -2.02
VMR1YHL035C RPS9AO13516 197 aaKnown RBP2.46□□□□□ -2.02
VMR1YHL035C AEP2P22136 580 aa2.46□□□□□ -2.02
VMR1YHL035C DPB3P27344 201 aa2.46□□□□□ -2.02
VMR1YHL035C SRP101P32916 621 aa2.46□□□□□ -2.02
VMR1YHL035C CTF13P35203 478 aa2.46□□□□□ -2.02
VMR1YHL035C GPP2P40106 250 aaKnown RBP2.46□□□□□ -2.02
VMR1YHL035C BAP3P41815 604 aa2.46□□□□□ -2.02
VMR1YHL035C MAP1Q01662 387 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
VMR1YHL035C YLR415CO13578 112 aa2.46□□□□□ -2.02
VMR1YHL035C YJR096WP47137 282 aa2.46□□□□□ -2.02
VMR1YHL035C SKY1Q03656 742 aa2.46□□□□□ -2.02
VMR1YHL035C TMA7Q3E764 64 aaKnown RBP2.46□□□□□ -2.02
VMR1YHL035C NUP145P49687 1317 aa2.46□□□□□ -2.02
VMR1YHL035C TUB3P09734 445 aaKnown RBP2.45□□□□□ -2.02
VMR1YHL035C TYS1P36421 394 aaKnown RBP2.45□□□□□ -2.02
VMR1YHL035C DCS2Q12123 353 aa2.45□□□□□ -2.02
VMR1YHL035C RRP6Q12149 733 aaKnown RBP2.45□□□□□ -2.02
VMR1YHL035C YLR358CO13565 187 aa2.45□□□□□ -2.02
VMR1YHL035C SED4P25365 1065 aa2.45□□□□□ -2.02
VMR1YHL035C EUG1P32474 517 aa2.45□□□□□ -2.02
VMR1YHL035C YEN1P40028 759 aa2.45□□□□□ -2.02
VMR1YHL035C LSB3P43603 459 aaKnown RBP2.45□□□□□ -2.02
VMR1YHL035C PEX8P53248 589 aa2.45□□□□□ -2.02
VMR1YHL035C ARG5,6Q01217 863 aa2.45□□□□□ -2.02
VMR1YHL035C REC102Q02721 264 aa2.45□□□□□ -2.02
VMR1YHL035C PLB2Q03674 706 aa2.45□□□□□ -2.02
VMR1YHL035C PWP2P25635 923 aaKnown RBP2.45□□□□□ -2.02
VMR1YHL035C OAF3P36023 863 aa2.45□□□□□ -2.02
VMR1YHL035C ERT1P38140 529 aa2.45□□□□□ -2.02
VMR1YHL035C HXT6P39003 570 aaKnown RBP2.45□□□□□ -2.02
VMR1YHL035C HXT7P39004 570 aa2.45□□□□□ -2.02
VMR1YHL035C RAD26P40352 1085 aa2.45□□□□□ -2.02
VMR1YHL035C IES1P43579 692 aa2.45□□□□□ -2.02
VMR1YHL035C PUS2P53167 370 aa2.45□□□□□ -2.02
VMR1YHL035C CNM67P53865 581 aaKnown RBP2.45□□□□□ -2.02
VMR1YHL035C ECM9Q02202 377 aa2.45□□□□□ -2.02
VMR1YHL035C PEX15Q08215 383 aa2.45□□□□□ -2.02
VMR1YHL035C HAL9Q12180 1030 aa2.45□□□□□ -2.02
VMR1YHL035C YLR149CQ99296 730 aa2.45□□□□□ -2.02
VMR1YHL035C TRP4P07285 380 aaPredicted RBP2.45□□□□□ -2.02
VMR1YHL035C FLR1P38124 548 aa2.45□□□□□ -2.02
VMR1YHL035C TPM2P40414 161 aa2.45□□□□□ -2.02
VMR1YHL035C AMA1P50082 593 aa2.45□□□□□ -2.02
VMR1YHL035C CEF1Q03654 590 aaPredicted RBP2.45□□□□□ -2.02
VMR1YHL035C LRS4Q04087 347 aaKnown RBP2.45□□□□□ -2.02
VMR1YHL035C SLX4Q12098 748 aa2.45□□□□□ -2.02
VMR1YHL035C PMA1P05030 918 aaKnown RBP2.44□□□□□ -2.02
VMR1YHL035C CMP2P14747 604 aa2.44□□□□□ -2.02
VMR1YHL035C PET127P32606 800 aa2.44□□□□□ -2.02
VMR1YHL035C SEC6P32844 805 aa2.44□□□□□ -2.02
VMR1YHL035C THI80P35202 319 aa2.44□□□□□ -2.02
VMR1YHL035C MNN10P50108 393 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms