RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W MCD4P36051 919 aa4.33□□□□□ -1.72
SEC4YFL005W PMT3P47190 753 aa4.33□□□□□ -1.72
SEC4YFL005W SNP1Q00916 300 aaPredicted RBP4.33□□□□□ -1.72
SEC4YFL005W TPO1Q07824 586 aa4.33□□□□□ -1.72
SEC4YFL005W RPP2AP05319 106 aaKnown RBP4.32□□□□□ -1.72
SEC4YFL005W RAD18P10862 487 aa4.32□□□□□ -1.72
SEC4YFL005W EMC1P25574 760 aa4.32□□□□□ -1.72
SEC4YFL005W PCL2P25693 308 aa4.32□□□□□ -1.72
SEC4YFL005W ATG19P35193 415 aa4.32□□□□□ -1.72
SEC4YFL005W RPN10P38886 268 aaKnown RBP4.32□□□□□ -1.72
SEC4YFL005W MGS1P40151 587 aa4.32□□□□□ -1.72
SEC4YFL005W RLP7P40693 322 aaKnown RBP4.32□□□□□ -1.72
SEC4YFL005W HXT16P47185 567 aa4.32□□□□□ -1.72
SEC4YFL005W SDA1P53313 767 aaKnown RBP4.32□□□□□ -1.72
SEC4YFL005W YAP6Q03935 383 aa4.32□□□□□ -1.72
SEC4YFL005W WHI4Q07655 649 aaKnown RBP4.32□□□□□ -1.72
SEC4YFL005W HMI1Q12039 706 aa4.32□□□□□ -1.72
SEC4YFL005W SPE1P08432 466 aa4.31□□□□□ -1.72
SEC4YFL005W FBP1P09201 348 aa4.31□□□□□ -1.72
SEC4YFL005W SFL1P20134 766 aa4.31□□□□□ -1.72
SEC4YFL005W YCL002CP25565 263 aa4.31□□□□□ -1.72
SEC4YFL005W HOG1P32485 435 aa4.31□□□□□ -1.72
SEC4YFL005W RPD3P32561 433 aa4.31□□□□□ -1.72
SEC4YFL005W DEF1P35732 738 aaKnown RBP4.31□□□□□ -1.72
SEC4YFL005W SAP190P36123 1033 aa4.31□□□□□ -1.72
SEC4YFL005W POA1P38218 177 aa4.31□□□□□ -1.72
SEC4YFL005W YIL108WP40483 696 aaKnown RBP4.31□□□□□ -1.72
SEC4YFL005W ALY2P47029 1046 aa4.31□□□□□ -1.72
SEC4YFL005W VPS62P53285 467 aa4.31□□□□□ -1.72
SEC4YFL005W LRS4Q04087 347 aaKnown RBP4.31□□□□□ -1.72
SEC4YFL005W YLR224WQ05947 369 aa4.31□□□□□ -1.72
SEC4YFL005W ADY3Q07732 790 aa4.31□□□□□ -1.72
SEC4YFL005W THI73Q07904 523 aa4.31□□□□□ -1.72
SEC4YFL005W YBR182C-AQ8TGU6 64 aa4.31□□□□□ -1.72
SEC4YFL005W DIF1O13577 133 aa4.3□□□□□ -1.72
SEC4YFL005W PCM1P38628 557 aaKnown RBP4.3□□□□□ -1.72
SEC4YFL005W SET5P38890 526 aaKnown RBP4.3□□□□□ -1.72
SEC4YFL005W YEN1P40028 759 aa4.3□□□□□ -1.72
SEC4YFL005W MET12P46151 657 aa4.3□□□□□ -1.72
SEC4YFL005W MET13P53128 600 aa4.3□□□□□ -1.72
SEC4YFL005W PUS2P53167 370 aa4.3□□□□□ -1.72
SEC4YFL005W NHX1Q04121 633 aa4.3□□□□□ -1.72
SEC4YFL005W SSL1Q04673 461 aaPredicted RBP4.3□□□□□ -1.72
SEC4YFL005W PRC1P00729 532 aa4.29□□□□□ -1.72
SEC4YFL005W SSB1P11484 613 aaKnown RBP4.29□□□□□ -1.72
SEC4YFL005W SSB2P40150 613 aaKnown RBP4.29□□□□□ -1.72
SEC4YFL005W URM1P40554 99 aaPredicted RBP4.29□□□□□ -1.72
SEC4YFL005W SHR5P41912 237 aa4.29□□□□□ -1.72
SEC4YFL005W YGR237CP50089 785 aa4.29□□□□□ -1.72
SEC4YFL005W KIN4Q01919 800 aa4.29□□□□□ -1.72
SEC4YFL005W UME1Q03010 460 aa4.29□□□□□ -1.72
SEC4YFL005W IOC4Q04213 475 aa4.29□□□□□ -1.72
SEC4YFL005W ATG33Q06485 197 aa4.29□□□□□ -1.72
SEC4YFL005W THI21Q08975 551 aa4.29□□□□□ -1.72
SEC4YFL005W YOR022CQ12204 715 aa4.29□□□□□ -1.72
SEC4YFL005W GIN4Q12263 1142 aa4.29□□□□□ -1.72
SEC4YFL005W NUP145P49687 1317 aa4.28□□□□□ -1.72
SEC4YFL005W HIS5P07172 385 aa4.28□□□□□ -1.72
SEC4YFL005W HSL7P38274 827 aa4.28□□□□□ -1.72
SEC4YFL005W MSS4P38994 779 aa4.28□□□□□ -1.72
SEC4YFL005W CHA4P43634 648 aa4.28□□□□□ -1.72
SEC4YFL005W GUD1Q07729 489 aa4.28□□□□□ -1.72
SEC4YFL005W GUP2Q08929 609 aa4.28□□□□□ -1.72
SEC4YFL005W HAL9Q12180 1030 aa4.28□□□□□ -1.72
SEC4YFL005W SSD1P24276 1250 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
SEC4YFL005W TYS1P36421 394 aaKnown RBP4.27□□□□□ -1.73
SEC4YFL005W CTF8P38877 133 aa4.27□□□□□ -1.73
SEC4YFL005W SDP1P40479 209 aa4.27□□□□□ -1.73
SEC4YFL005W AIM14P53109 570 aa4.27□□□□□ -1.73
SEC4YFL005W DUS1P53759 423 aaKnown RBP4.27□□□□□ -1.73
SEC4YFL005W UPC2Q12151 913 aa4.27□□□□□ -1.73
SEC4YFL005W HMG1P12683 1054 aa4.26□□□□□ -1.73
SEC4YFL005W SED4P25365 1065 aa4.26□□□□□ -1.73
SEC4YFL005W TOM20P35180 183 aa4.26□□□□□ -1.73
SEC4YFL005W DOT6P40059 670 aaKnown RBP4.26□□□□□ -1.73
SEC4YFL005W ZIP2P53061 704 aa4.26□□□□□ -1.73
SEC4YFL005W GPG1P53130 126 aa4.26□□□□□ -1.73
SEC4YFL005W NPY1P53164 384 aa4.26□□□□□ -1.73
SEC4YFL005W HFD1Q04458 532 aa4.26□□□□□ -1.73
SEC4YFL005W YDR338CQ05497 695 aa4.26□□□□□ -1.73
SEC4YFL005W CRR1Q05790 422 aa4.26□□□□□ -1.73
SEC4YFL005W NOP12Q08208 459 aaKnown RBP4.26□□□□□ -1.73
SEC4YFL005W FAP7Q12055 197 aaPredicted RBP4.26□□□□□ -1.73
SEC4YFL005W MIH1P23748 554 aa4.25□□□□□ -1.73
SEC4YFL005W STE14P32584 239 aa4.25□□□□□ -1.73
SEC4YFL005W OAR1P35731 278 aa4.25□□□□□ -1.73
SEC4YFL005W YHR078WP38799 552 aa4.25□□□□□ -1.73
SEC4YFL005W CKB2P38930 258 aa4.25□□□□□ -1.73
SEC4YFL005W PLB1P39105 664 aa4.25□□□□□ -1.73
SEC4YFL005W YFL052WP43551 465 aa4.25□□□□□ -1.73
SEC4YFL005W BNA2P47125 453 aa4.25□□□□□ -1.73
SEC4YFL005W YJR096WP47137 282 aa4.25□□□□□ -1.73
SEC4YFL005W NCS6P53088 359 aa4.25□□□□□ -1.73
SEC4YFL005W MTQ2Q03920 221 aaPredicted RBP4.25□□□□□ -1.73
SEC4YFL005W MRC1P25588 1096 aa4.24□□□□□ -1.73
SEC4YFL005W CCR4P31384 837 aaKnown RBP4.24□□□□□ -1.73
SEC4YFL005W PRP19P32523 503 aaKnown RBP4.24□□□□□ -1.73
SEC4YFL005W PAF1P38351 445 aa4.24□□□□□ -1.73
SEC4YFL005W GPP1P41277 250 aaKnown RBP4.24□□□□□ -1.73
SEC4YFL005W SSY5P47002 699 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms