RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C YGR283CP53336 341 aaPredicted RBP3.68□□□□□ -1.82
SMB1YER029C TOM70P07213 617 aaKnown RBP3.67□□□□□ -1.82
SMB1YER029C ERR1P0CX10 437 aa3.67□□□□□ -1.82
SMB1YER029C ERR2P0CX11 437 aa3.67□□□□□ -1.82
SMB1YER029C SED4P25365 1065 aa3.67□□□□□ -1.82
SMB1YER029C TMT1P32643 299 aa3.67□□□□□ -1.82
SMB1YER029C TYE7P33122 291 aaPredicted RBP3.67□□□□□ -1.82
SMB1YER029C YIL108WP40483 696 aaKnown RBP3.67□□□□□ -1.82
SMB1YER029C ERG5P54781 538 aa3.67□□□□□ -1.82
SMB1YER029C SUT2Q12286 268 aa3.67□□□□□ -1.82
SMB1YER029C YNL162W-AQ3E7A8 72 aa3.67□□□□□ -1.82
SMB1YER029C TUB3P09734 445 aaKnown RBP3.66□□□□□ -1.82
SMB1YER029C GFA1P14742 717 aaKnown RBP3.66□□□□□ -1.82
SMB1YER029C PRP4P20053 465 aaKnown RBP3.66□□□□□ -1.82
SMB1YER029C RFA1P22336 621 aaKnown RBP3.66□□□□□ -1.82
SMB1YER029C SCT1P32784 759 aa3.66□□□□□ -1.82
SMB1YER029C YHL017WP38745 532 aa3.66□□□□□ -1.82
SMB1YER029C ALG2P43636 503 aa3.66□□□□□ -1.82
SMB1YER029C DAS1P47005 663 aa3.66□□□□□ -1.82
SMB1YER029C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
SMB1YER029C HXT16P47185 567 aa3.66□□□□□ -1.82
SMB1YER029C ATP25Q03153 612 aa3.66□□□□□ -1.82
SMB1YER029C TUB1P09733 447 aaKnown RBP3.65□□□□□ -1.83
SMB1YER029C TIM23P32897 222 aa3.65□□□□□ -1.83
SMB1YER029C SPC29P33419 253 aa3.65□□□□□ -1.83
SMB1YER029C PPS1P38148 807 aa3.65□□□□□ -1.83
SMB1YER029C TDP1P38319 544 aa3.65□□□□□ -1.83
SMB1YER029C RIX1P38883 763 aaPredicted RBP3.65□□□□□ -1.83
SMB1YER029C CEP3P40969 608 aa3.65□□□□□ -1.83
SMB1YER029C TAD1P53065 400 aa3.65□□□□□ -1.83
SMB1YER029C NOG2P53742 486 aaKnown RBP3.65□□□□□ -1.83
SMB1YER029C VPS30Q02948 557 aa3.65□□□□□ -1.83
SMB1YER029C LRS4Q04087 347 aaKnown RBP3.65□□□□□ -1.83
SMB1YER029C GPR1Q12361 961 aa3.65□□□□□ -1.83
SMB1YER029C YTA7P40340 1379 aa3.64□□□□□ -1.83
SMB1YER029C DAL7P21826 554 aa3.64□□□□□ -1.83
SMB1YER029C YCL002CP25565 263 aa3.64□□□□□ -1.83
SMB1YER029C YKL091CP33324 310 aaKnown RBP3.64□□□□□ -1.83
SMB1YER029C YHR078WP38799 552 aa3.64□□□□□ -1.83
SMB1YER029C GDH3P39708 457 aa3.64□□□□□ -1.83
SMB1YER029C DUS1P53759 423 aaKnown RBP3.64□□□□□ -1.83
SMB1YER029C FRE5Q08908 694 aa3.64□□□□□ -1.83
SMB1YER029C HAL9Q12180 1030 aa3.64□□□□□ -1.83
SMB1YER029C CYS3P31373 394 aaKnown RBP3.63□□□□□ -1.83
SMB1YER029C SRP40P32583 406 aaPredicted RBP3.63□□□□□ -1.83
SMB1YER029C CHZ1P40019 153 aaPredicted RBP3.63□□□□□ -1.83
SMB1YER029C NIT3P49954 291 aa3.63□□□□□ -1.83
SMB1YER029C MRPS35P53292 345 aa3.63□□□□□ -1.83
SMB1YER029C ASI2P53895 289 aa3.63□□□□□ -1.83
SMB1YER029C MET7Q08645 548 aa3.63□□□□□ -1.83
SMB1YER029C THI21Q08975 551 aa3.63□□□□□ -1.83
SMB1YER029C YOR022CQ12204 715 aa3.63□□□□□ -1.83
SMB1YER029C RPS9AO13516 197 aaKnown RBP3.62□□□□□ -1.83
SMB1YER029C CIT2P08679 460 aa3.62□□□□□ -1.83
SMB1YER029C HCA4P20448 770 aaKnown RBP3.62□□□□□ -1.83
SMB1YER029C ILV6P25605 309 aaKnown RBP3.62□□□□□ -1.83
SMB1YER029C CTF13P35203 478 aa3.62□□□□□ -1.83
SMB1YER029C NUP82P40368 713 aa3.62□□□□□ -1.83
SMB1YER029C DAM1P53267 343 aa3.62□□□□□ -1.83
SMB1YER029C SEC5P89102 971 aa3.62□□□□□ -1.83
SMB1YER029C YDR338CQ05497 695 aa3.62□□□□□ -1.83
SMB1YER029C REH1Q06709 432 aa3.62□□□□□ -1.83
SMB1YER029C YOR131CQ12486 218 aa3.62□□□□□ -1.83
SMB1YER029C YBR182C-AQ8TGU6 64 aa3.62□□□□□ -1.83
SMB1YER029C MET3P08536 511 aa3.61□□□□□ -1.83
SMB1YER029C MEF1P25039 761 aa3.61□□□□□ -1.83
SMB1YER029C GLO1P50107 326 aa3.61□□□□□ -1.83
SMB1YER029C PEX19Q07418 342 aa3.61□□□□□ -1.83
SMB1YER029C MDM12Q92328 271 aa3.61□□□□□ -1.83
SMB1YER029C PHR1P05066 565 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
SMB1YER029C MTC2P34246 357 aa3.6□□□□□ -1.83
SMB1YER029C FLO10P36170 1169 aa3.6□□□□□ -1.83
SMB1YER029C SET5P38890 526 aaKnown RBP3.6□□□□□ -1.83
SMB1YER029C TAH11P47112 604 aa3.6□□□□□ -1.83
SMB1YER029C VPS73P53142 486 aaKnown RBP3.6□□□□□ -1.83
SMB1YER029C PUS2P53167 370 aa3.6□□□□□ -1.83
SMB1YER029C ORC1P54784 914 aaPredicted RBP3.6□□□□□ -1.83
SMB1YER029C ASM4Q05166 528 aa3.6□□□□□ -1.83
SMB1YER029C TRM11Q12463 433 aa3.6□□□□□ -1.83
SMB1YER029C PHO8P11491 566 aa3.59□□□□□ -1.83
SMB1YER029C PER1P25625 357 aa3.59□□□□□ -1.83
SMB1YER029C SIC1P38634 284 aa3.59□□□□□ -1.83
SMB1YER029C ELO3P40319 345 aa3.59□□□□□ -1.83
SMB1YER029C VHR1P40522 640 aa3.59□□□□□ -1.83
SMB1YER029C PFA3P42836 336 aa3.59□□□□□ -1.83
SMB1YER029C HSV2P50079 448 aaPredicted RBP3.59□□□□□ -1.83
SMB1YER029C ZIP2P53061 704 aa3.59□□□□□ -1.83
SMB1YER029C MUS81Q04149 632 aaPredicted RBP3.59□□□□□ -1.83
SMB1YER029C DLT1Q04216 342 aa3.59□□□□□ -1.83
SMB1YER029C YDR514CQ04408 483 aa3.59□□□□□ -1.83
SMB1YER029C ADY4Q05955 493 aa3.59□□□□□ -1.83
SMB1YER029C THI7Q05998 598 aa3.59□□□□□ -1.83
SMB1YER029C RSC3Q06639 885 aa3.59□□□□□ -1.83
SMB1YER029C PRC1P00729 532 aa3.58□□□□□ -1.84
SMB1YER029C CDC43P18898 376 aa3.58□□□□□ -1.84
SMB1YER029C MIH1P23748 554 aa3.58□□□□□ -1.84
SMB1YER029C MSH2P25847 964 aa3.58□□□□□ -1.84
SMB1YER029C MCD4P36051 919 aa3.58□□□□□ -1.84
SMB1YER029C RLP7P40693 322 aaKnown RBP3.58□□□□□ -1.84
SMB1YER029C SSY5P47002 699 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms