RNA–Protein interactions for RNA: YDR489W

SLD5, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene SLD5, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLD5	YDR489W	PBP1	P53297	722 aa	Known RBP	4.11	□□□□□ -1.75
SLD5	YDR489W	YNR029C	P53729	429 aa	Known RBP	4.11	□□□□□ -1.75
SLD5	YDR489W	ENA2	Q01896	1091 aa		4.11	□□□□□ -1.75
SLD5	YDR489W	WHI4	Q07655	649 aa	Known RBP	4.11	□□□□□ -1.75
SLD5	YDR489W	NTO1	Q12311	748 aa		4.11	□□□□□ -1.75
SLD5	YDR489W	ENA5	Q12691	1091 aa		4.11	□□□□□ -1.75
SLD5	YDR489W	HIS5	P07172	385 aa		4.1	□□□□□ -1.75
SLD5	YDR489W	EMC1	P25574	760 aa		4.1	□□□□□ -1.75
SLD5	YDR489W	CYS3	P31373	394 aa	Known RBP	4.1	□□□□□ -1.75
SLD5	YDR489W	HOG1	P32485	435 aa		4.1	□□□□□ -1.75
SLD5	YDR489W	LST4	P34239	828 aa		4.1	□□□□□ -1.75
SLD5	YDR489W	ATG19	P35193	415 aa		4.1	□□□□□ -1.75
SLD5	YDR489W	PCM1	P38628	557 aa	Known RBP	4.1	□□□□□ -1.75
SLD5	YDR489W	RLP7	P40693	322 aa	Known RBP	4.1	□□□□□ -1.75
SLD5	YDR489W	NCS6	P53088	359 aa		4.1	□□□□□ -1.75
SLD5	YDR489W	MET13	P53128	600 aa		4.1	□□□□□ -1.75
SLD5	YDR489W	GPB1	Q08886	897 aa		4.1	□□□□□ -1.75
SLD5	YDR489W	HAL9	Q12180	1030 aa		4.1	□□□□□ -1.75
SLD5	YDR489W	RAD18	P10862	487 aa		4.09	□□□□□ -1.75
SLD5	YDR489W	HMG1	P12683	1054 aa		4.09	□□□□□ -1.75
SLD5	YDR489W	STE11	P23561	717 aa		4.09	□□□□□ -1.75
SLD5	YDR489W	PMI40	P29952	429 aa	Known RBP	4.09	□□□□□ -1.75
SLD5	YDR489W	CRP1	P38845	465 aa	Known RBP	4.09	□□□□□ -1.75
SLD5	YDR489W	SET5	P38890	526 aa	Known RBP	4.09	□□□□□ -1.75
SLD5	YDR489W	YIL108W	P40483	696 aa	Known RBP	4.09	□□□□□ -1.75
SLD5	YDR489W	AIM21	P40563	679 aa		4.09	□□□□□ -1.75
SLD5	YDR489W	CEP3	P40969	608 aa		4.09	□□□□□ -1.75
SLD5	YDR489W	ALY2	P47029	1046 aa		4.09	□□□□□ -1.75
SLD5	YDR489W	GCV2	P49095	1034 aa		4.09	□□□□□ -1.75
SLD5	YDR489W	GPG1	P53130	126 aa		4.09	□□□□□ -1.75
SLD5	YDR489W	DUS1	P53759	423 aa	Known RBP	4.09	□□□□□ -1.75
SLD5	YDR489W	SLU7	Q02775	382 aa	Known RBP	4.09	□□□□□ -1.75
SLD5	YDR489W	VPS30	Q02948	557 aa		4.09	□□□□□ -1.75
SLD5	YDR489W	YAP6	Q03935	383 aa		4.09	□□□□□ -1.75
SLD5	YDR489W	TMA10	Q06177	86 aa		4.09	□□□□□ -1.75
SLD5	YDR489W	RXT3	Q07458	294 aa		4.09	□□□□□ -1.75
SLD5	YDR489W	ACK1	Q07622	623 aa	Predicted RBP	4.09	□□□□□ -1.75
SLD5	YDR489W	NOP12	Q08208	459 aa	Known RBP	4.09	□□□□□ -1.75
SLD5	YDR489W	YOR022C	Q12204	715 aa		4.09	□□□□□ -1.75
SLD5	YDR489W	GPR1	Q12361	961 aa		4.09	□□□□□ -1.75
SLD5	YDR489W	RPS9A	O13516	197 aa	Known RBP	4.08	□□□□□ -1.76
SLD5	YDR489W	RPP2A	P05319	106 aa	Known RBP	4.08	□□□□□ -1.76
SLD5	YDR489W	SFL1	P20134	766 aa		4.08	□□□□□ -1.76
SLD5	YDR489W	SFP1	P32432	683 aa		4.08	□□□□□ -1.76
SLD5	YDR489W	ATG33	Q06485	197 aa		4.08	□□□□□ -1.76
SLD5	YDR489W	URN1	Q06525	465 aa	Known RBP	4.08	□□□□□ -1.76
SLD5	YDR489W	DIF1	O13577	133 aa		4.07	□□□□□ -1.76
SLD5	YDR489W	PHO23	P50947	330 aa		4.07	□□□□□ -1.76
SLD5	YDR489W	ZIP2	P53061	704 aa		4.07	□□□□□ -1.76
SLD5	YDR489W	GUP2	Q08929	609 aa		4.07	□□□□□ -1.76
SLD5	YDR489W	KCS1	Q12494	1050 aa		4.07	□□□□□ -1.76
SLD5	YDR489W	YLR149C	Q99296	730 aa		4.07	□□□□□ -1.76
SLD5	YDR489W	PRC1	P00729	532 aa		4.06	□□□□□ -1.76
SLD5	YDR489W	TUB3	P09734	445 aa	Known RBP	4.06	□□□□□ -1.76
SLD5	YDR489W	PRP4	P20053	465 aa	Known RBP	4.06	□□□□□ -1.76
SLD5	YDR489W	CCR4	P31384	837 aa	Known RBP	4.06	□□□□□ -1.76
SLD5	YDR489W	YHR078W	P38799	552 aa		4.06	□□□□□ -1.76
SLD5	YDR489W	CHS7	P38843	316 aa		4.06	□□□□□ -1.76
SLD5	YDR489W	BNA2	P47125	453 aa		4.06	□□□□□ -1.76
SLD5	YDR489W	PMT3	P47190	753 aa		4.06	□□□□□ -1.76
SLD5	YDR489W	SDA1	P53313	767 aa	Known RBP	4.06	□□□□□ -1.76
SLD5	YDR489W	ASI2	P53895	289 aa		4.06	□□□□□ -1.76
SLD5	YDR489W	NHX1	Q04121	633 aa		4.06	□□□□□ -1.76
SLD5	YDR489W	YLR224W	Q05947	369 aa		4.06	□□□□□ -1.76
SLD5	YDR489W	THI73	Q07904	523 aa		4.06	□□□□□ -1.76
SLD5	YDR489W	TSR4	P25040	408 aa		4.05	□□□□□ -1.76
SLD5	YDR489W	SEC21	P32074	935 aa	Known RBP	4.05	□□□□□ -1.76
SLD5	YDR489W	YJR096W	P47137	282 aa		4.05	□□□□□ -1.76
SLD5	YDR489W	HLJ1	P48353	224 aa		4.05	□□□□□ -1.76
SLD5	YDR489W	EXG2	P52911	562 aa		4.05	□□□□□ -1.76
SLD5	YDR489W	AIM14	P53109	570 aa		4.05	□□□□□ -1.76
SLD5	YDR489W	PUS2	P53167	370 aa		4.05	□□□□□ -1.76
SLD5	YDR489W	UME1	Q03010	460 aa		4.05	□□□□□ -1.76
SLD5	YDR489W	NPC2	Q12408	173 aa		4.05	□□□□□ -1.76
SLD5	YDR489W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
SLD5	YDR489W	YKR051W	P36142	418 aa		4.04	□□□□□ -1.76
SLD5	YDR489W	HSL7	P38274	827 aa		4.04	□□□□□ -1.76
SLD5	YDR489W	PAF1	P38351	445 aa		4.04	□□□□□ -1.76
SLD5	YDR489W	RPN10	P38886	268 aa	Known RBP	4.04	□□□□□ -1.76
SLD5	YDR489W	YEN1	P40028	759 aa		4.04	□□□□□ -1.76
SLD5	YDR489W	MTQ2	Q03920	221 aa	Predicted RBP	4.04	□□□□□ -1.76
SLD5	YDR489W	IOC4	Q04213	475 aa		4.04	□□□□□ -1.76
SLD5	YDR489W	ASM4	Q05166	528 aa		4.04	□□□□□ -1.76
SLD5	YDR489W	GIN4	Q12263	1142 aa		4.04	□□□□□ -1.76
SLD5	YDR489W	LAS17	Q12446	633 aa		4.04	□□□□□ -1.76
SLD5	YDR489W	NUP145	P49687	1317 aa		4.03	□□□□□ -1.76
SLD5	YDR489W	SED4	P25365	1065 aa		4.03	□□□□□ -1.76
SLD5	YDR489W	YKR018C	P36114	725 aa		4.03	□□□□□ -1.76
SLD5	YDR489W	SAP190	P36123	1033 aa		4.03	□□□□□ -1.76
SLD5	YDR489W	PLB1	P39105	664 aa		4.03	□□□□□ -1.76
SLD5	YDR489W	GPP1	P41277	250 aa	Known RBP	4.03	□□□□□ -1.76
SLD5	YDR489W	SHR5	P41912	237 aa		4.03	□□□□□ -1.76
SLD5	YDR489W	SSY5	P47002	699 aa		4.03	□□□□□ -1.76
SLD5	YDR489W	YGR237C	P50089	785 aa		4.03	□□□□□ -1.76
SLD5	YDR489W	UBC9	P50623	157 aa	Predicted RBP	4.03	□□□□□ -1.76
SLD5	YDR489W	ERG5	P54781	538 aa		4.03	□□□□□ -1.76
SLD5	YDR489W	GUD1	Q07729	489 aa		4.03	□□□□□ -1.76
SLD5	YDR489W	Q0142	Q9ZZW4	58 aa		4.03	□□□□□ -1.76
SLD5	YDR489W	PMA1	P05030	918 aa	Known RBP	4.02	□□□□□ -1.77
SLD5	YDR489W	SSB1	P11484	613 aa	Known RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 40 ms