RNA–Protein interactions for RNA: YDR121W

DPB4, Transcript of Subunit of DNA pol epsilon and of ISW2 chromatin accessibility complex, yeast

Gene DPB4, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DPB4	YDR121W	RRP8	P38961	392 aa	Known RBP	4.85	□□□□□ -1.63
DPB4	YDR121W	VPS53	P47061	822 aa		4.85	□□□□□ -1.63
DPB4	YDR121W	NUT1	P53114	1132 aa		4.85	□□□□□ -1.63
DPB4	YDR121W	RPS15	Q01855	142 aa	Known RBP	4.85	□□□□□ -1.63
DPB4	YDR121W	TRM11	Q12463	433 aa		4.85	□□□□□ -1.63
DPB4	YDR121W	RTP1	Q12751	981 aa		4.85	□□□□□ -1.63
DPB4	YDR121W	NOP14	Q99207	810 aa	Known RBP	4.85	□□□□□ -1.63
DPB4	YDR121W	CIT1	P00890	479 aa		4.84	□□□□□ -1.63
DPB4	YDR121W	CAN1	P04817	590 aa		4.84	□□□□□ -1.63
DPB4	YDR121W	SBP1	P10080	294 aa	Known RBP	4.84	□□□□□ -1.63
DPB4	YDR121W	RPC31	P17890	251 aa		4.84	□□□□□ -1.63
DPB4	YDR121W	HSP60	P19882	572 aa	Known RBP	4.84	□□□□□ -1.63
DPB4	YDR121W	RIT1	P23796	513 aa		4.84	□□□□□ -1.63
DPB4	YDR121W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
DPB4	YDR121W	RAD27	P26793	382 aa		4.84	□□□□□ -1.63
DPB4	YDR121W	MCM4	P30665	933 aa	Known RBP	4.84	□□□□□ -1.63
DPB4	YDR121W	PYC2	P32327	1180 aa	Known RBP	4.84	□□□□□ -1.63
DPB4	YDR121W	IRE1	P32361	1115 aa		4.84	□□□□□ -1.63
DPB4	YDR121W	TFC4	P33339	1025 aa		4.84	□□□□□ -1.63
DPB4	YDR121W	MYO3	P36006	1272 aa		4.84	□□□□□ -1.63
DPB4	YDR121W	GPT2	P36148	743 aa		4.84	□□□□□ -1.63
DPB4	YDR121W	REG2	P38232	338 aa		4.84	□□□□□ -1.63
DPB4	YDR121W	OSH3	P38713	996 aa	Known RBP	4.84	□□□□□ -1.63
DPB4	YDR121W	RSC8	P43609	557 aa	Known RBP	4.84	□□□□□ -1.63
DPB4	YDR121W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
DPB4	YDR121W	GNP1	P48813	663 aa		4.84	□□□□□ -1.63
DPB4	YDR121W	FOL1	P53848	824 aa		4.84	□□□□□ -1.63
DPB4	YDR121W	HDA1	P53973	706 aa		4.84	□□□□□ -1.63
DPB4	YDR121W	VPS30	Q02948	557 aa		4.84	□□□□□ -1.63
DPB4	YDR121W	EMG1	Q06287	252 aa	Known RBP	4.84	□□□□□ -1.63
DPB4	YDR121W	SPO75	Q07798	868 aa		4.84	□□□□□ -1.63
DPB4	YDR121W	RKM4	Q12504	494 aa		4.84	□□□□□ -1.63
DPB4	YDR121W	TRP2	P00899	507 aa	Known RBP	4.83	□□□□□ -1.64
DPB4	YDR121W	GPM1	P00950	247 aa	Known RBP	4.83	□□□□□ -1.64
DPB4	YDR121W	MAS2	P11914	482 aa		4.83	□□□□□ -1.64
DPB4	YDR121W	SEA4	P38164	1038 aa		4.83	□□□□□ -1.64
DPB4	YDR121W	VPS45	P38932	577 aa		4.83	□□□□□ -1.64
DPB4	YDR121W	JHD1	P40034	492 aa		4.83	□□□□□ -1.64
DPB4	YDR121W	SGM1	P47166	707 aa		4.83	□□□□□ -1.64
DPB4	YDR121W	MSH6	Q03834	1242 aa		4.83	□□□□□ -1.64
DPB4	YDR121W	GUD1	Q07729	489 aa		4.83	□□□□□ -1.64
DPB4	YDR121W	ISA1	Q07821	250 aa	Predicted RBP	4.83	□□□□□ -1.64
DPB4	YDR121W	FMP25	Q08023	583 aa		4.83	□□□□□ -1.64
DPB4	YDR121W	NTG2	Q08214	380 aa		4.83	□□□□□ -1.64
DPB4	YDR121W	TMA46	Q12000	345 aa	Known RBP	4.83	□□□□□ -1.64
DPB4	YDR121W	NUC1	P08466	329 aa		4.82	□□□□□ -1.64
DPB4	YDR121W	OPI1	P21957	404 aa		4.82	□□□□□ -1.64
DPB4	YDR121W	ANP1	P32629	500 aa		4.82	□□□□□ -1.64
DPB4	YDR121W	VBA5	P36172	582 aa		4.82	□□□□□ -1.64
DPB4	YDR121W	GGA2	P38817	585 aa	Known RBP	4.82	□□□□□ -1.64
DPB4	YDR121W	PEX28	P38848	579 aa		4.82	□□□□□ -1.64
DPB4	YDR121W	PMC1	P38929	1173 aa	Predicted RBP	4.82	□□□□□ -1.64
DPB4	YDR121W	INP51	P40559	946 aa	Known RBP	4.82	□□□□□ -1.64
DPB4	YDR121W	PFD1	P46988	109 aa		4.82	□□□□□ -1.64
DPB4	YDR121W	AZR1	P50080	613 aa		4.82	□□□□□ -1.64
DPB4	YDR121W	RTA1	P53047	317 aa		4.82	□□□□□ -1.64
DPB4	YDR121W	SPO20	Q04359	397 aa		4.82	□□□□□ -1.64
DPB4	YDR121W	HDA2	Q06629	674 aa		4.82	□□□□□ -1.64
DPB4	YDR121W	BRE1	Q07457	700 aa	Known RBP	4.82	□□□□□ -1.64
DPB4	YDR121W	YDR215C	Q12240	137 aa		4.82	□□□□□ -1.64
DPB4	YDR121W	FAB1	P34756	2278 aa		4.82	□□□□□ -1.64
DPB4	YDR121W	TOR2	P32600	2474 aa	Known RBP	4.81	□□□□□ -1.64
DPB4	YDR121W	CDC16	P09798	840 aa		4.81	□□□□□ -1.64
DPB4	YDR121W	SRP54	P20424	541 aa	Known RBP	4.81	□□□□□ -1.64
DPB4	YDR121W	AGP1	P25376	633 aa		4.81	□□□□□ -1.64
DPB4	YDR121W	ARE1	P25628	610 aa		4.81	□□□□□ -1.64
DPB4	YDR121W	MRP8	P35719	219 aa		4.81	□□□□□ -1.64
DPB4	YDR121W	AHP1	P38013	176 aa	Known RBP	4.81	□□□□□ -1.64
DPB4	YDR121W	TVP23	P38962	199 aa		4.81	□□□□□ -1.64
DPB4	YDR121W	PES4	P39684	611 aa		4.81	□□□□□ -1.64
DPB4	YDR121W	RVS167	P39743	482 aa	Known RBP	4.81	□□□□□ -1.64
DPB4	YDR121W	CSM2	P40465	213 aa		4.81	□□□□□ -1.64
DPB4	YDR121W	RPS7B	P48164	190 aa	Known RBP	4.81	□□□□□ -1.64
DPB4	YDR121W	MCM6	P53091	1017 aa	Known RBP	4.81	□□□□□ -1.64
DPB4	YDR121W	ERP6	P53198	216 aa		4.81	□□□□□ -1.64
DPB4	YDR121W	PEX13	P80667	386 aa		4.81	□□□□□ -1.64
DPB4	YDR121W	CUS1	Q02554	436 aa	Predicted RBP	4.81	□□□□□ -1.64
DPB4	YDR121W	EAF1	Q06337	982 aa		4.81	□□□□□ -1.64
DPB4	YDR121W	PMT7	Q06644	662 aa		4.81	□□□□□ -1.64
DPB4	YDR121W	SNA3	P14359	133 aa		4.8	□□□□□ -1.64
DPB4	YDR121W	SEC23	P15303	768 aa	Known RBP	4.8	□□□□□ -1.64
DPB4	YDR121W	RPL8A	P17076	256 aa	Known RBP	4.8	□□□□□ -1.64
DPB4	YDR121W	MSH2	P25847	964 aa		4.8	□□□□□ -1.64
DPB4	YDR121W	SBA1	P28707	216 aa	Known RBP	4.8	□□□□□ -1.64
DPB4	YDR121W	LYP1	P32487	611 aa		4.8	□□□□□ -1.64
DPB4	YDR121W	AMN1	P38285	549 aa	Predicted RBP	4.8	□□□□□ -1.64
DPB4	YDR121W	YIL165C	P40446	119 aa		4.8	□□□□□ -1.64
DPB4	YDR121W	YGL140C	P53120	1219 aa		4.8	□□□□□ -1.64
DPB4	YDR121W	RPT6	Q01939	405 aa	Known RBP	4.8	□□□□□ -1.64
DPB4	YDR121W	MYO5	Q04439	1219 aa	Known RBP	4.8	□□□□□ -1.64
DPB4	YDR121W	DAP1	Q12091	152 aa		4.8	□□□□□ -1.64
DPB4	YDR121W	ATG11	Q12527	1178 aa		4.8	□□□□□ -1.64
DPB4	YDR121W	PDC6	P26263	563 aa	Known RBP	4.79	□□□□□ -1.64
DPB4	YDR121W	SFP1	P32432	683 aa		4.79	□□□□□ -1.64
DPB4	YDR121W	SEC6	P32844	805 aa		4.79	□□□□□ -1.64
DPB4	YDR121W	RER2	P35196	286 aa		4.79	□□□□□ -1.64
DPB4	YDR121W	POA1	P38218	177 aa		4.79	□□□□□ -1.64
DPB4	YDR121W	HXT13	P39924	564 aa		4.79	□□□□□ -1.64
DPB4	YDR121W	IRR1	P40541	1150 aa		4.79	□□□□□ -1.64
DPB4	YDR121W	FMS1	P50264	508 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 82.7 ms