RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	SRT1	Q03175	343 aa		6.55	□□□□□ -1.36
SNF11	YDR073W	BLS1	Q06071	122 aa		6.55	□□□□□ -1.36
SNF11	YDR073W	HIM1	Q06674	414 aa		6.55	□□□□□ -1.36
SNF11	YDR073W	APM4	Q99186	491 aa		6.55	□□□□□ -1.36
SNF11	YDR073W	RPS9A	O13516	197 aa	Known RBP	6.54	□□□□□ -1.36
SNF11	YDR073W	COQ4	O13525	335 aa		6.54	□□□□□ -1.36
SNF11	YDR073W	SEC18	P18759	758 aa	Known RBP	6.54	□□□□□ -1.36
SNF11	YDR073W	MSH1	P25846	959 aa		6.54	□□□□□ -1.36
SNF11	YDR073W	NAM7	P30771	971 aa	Known RBP	6.54	□□□□□ -1.36
SNF11	YDR073W	FUN30	P31380	1131 aa		6.54	□□□□□ -1.36
SNF11	YDR073W	YSC84	P32793	468 aa		6.54	□□□□□ -1.36
SNF11	YDR073W	BEM3	P32873	1128 aa		6.54	□□□□□ -1.36
SNF11	YDR073W	OAF3	P36023	863 aa		6.54	□□□□□ -1.36
SNF11	YDR073W	ERR3	P42222	437 aa		6.54	□□□□□ -1.36
SNF11	YDR073W	SFB2	P53953	876 aa		6.54	□□□□□ -1.36
SNF11	YDR073W	LRS4	Q04087	347 aa	Known RBP	6.54	□□□□□ -1.36
SNF11	YDR073W	CRR1	Q05790	422 aa		6.54	□□□□□ -1.36
SNF11	YDR073W	RPN7	Q06103	429 aa	Known RBP	6.54	□□□□□ -1.36
SNF11	YDR073W	YPL277C	Q08989	487 aa		6.54	□□□□□ -1.36
SNF11	YDR073W	RPS21B	Q3E754	87 aa	Known RBP	6.54	□□□□□ -1.36
SNF11	YDR073W	TY4B-P	A0A0B7P3V8	1104 aa		6.53	□□□□□ -1.36
SNF11	YDR073W	YCL002C	P25565	263 aa		6.53	□□□□□ -1.36
SNF11	YDR073W	URA1	P28272	314 aa	Predicted RBP	6.53	□□□□□ -1.36
SNF11	YDR073W	SEC65	P29478	273 aa		6.53	□□□□□ -1.36
SNF11	YDR073W	NFU1	P32860	256 aa		6.53	□□□□□ -1.36
SNF11	YDR073W	ALG14	P38242	237 aa		6.53	□□□□□ -1.36
SNF11	YDR073W	NPP2	P39997	493 aa		6.53	□□□□□ -1.36
SNF11	YDR073W	ASK10	P48361	1146 aa		6.53	□□□□□ -1.36
SNF11	YDR073W	TRS130	Q03660	1102 aa		6.53	□□□□□ -1.36
SNF11	YDR073W	TPP1	Q03796	238 aa		6.53	□□□□□ -1.36
SNF11	YDR073W	TY4A-H	Q6Q5P6	413 aa		6.53	□□□□□ -1.36
SNF11	YDR073W	FOB1	O13329	566 aa		6.52	□□□□□ -1.37
SNF11	YDR073W	SNF5	P18480	905 aa		6.52	□□□□□ -1.37
SNF11	YDR073W	CYS3	P31373	394 aa	Known RBP	6.52	□□□□□ -1.37
SNF11	YDR073W	PET309	P32522	965 aa	Predicted RBP	6.52	□□□□□ -1.37
SNF11	YDR073W	BLI1	P35727	113 aa		6.52	□□□□□ -1.37
SNF11	YDR073W	APL2	P36000	726 aa	Predicted RBP	6.52	□□□□□ -1.37
SNF11	YDR073W	YKR051W	P36142	418 aa		6.52	□□□□□ -1.37
SNF11	YDR073W	MAL31	P38156	614 aa		6.52	□□□□□ -1.37
SNF11	YDR073W	PSY4	P38193	441 aa		6.52	□□□□□ -1.37
SNF11	YDR073W	SET5	P38890	526 aa	Known RBP	6.52	□□□□□ -1.37
SNF11	YDR073W	SAW1	P39735	261 aa		6.52	□□□□□ -1.37
SNF11	YDR073W	ENV11	P53246	860 aa		6.52	□□□□□ -1.37
SNF11	YDR073W	DSE4	P53753	1117 aa		6.52	□□□□□ -1.37
SNF11	YDR073W	TEP1	P53916	434 aa		6.52	□□□□□ -1.37
SNF11	YDR073W	YDR056C	Q12025	205 aa		6.52	□□□□□ -1.37
SNF11	YDR073W	NUR1	Q12066	484 aa		6.52	□□□□□ -1.37
SNF11	YDR073W	YBR182C-A	Q8TGU6	64 aa		6.52	□□□□□ -1.37
SNF11	YDR073W	CDC31	P06704	161 aa	Known RBP	6.51	□□□□□ -1.37
SNF11	YDR073W	PDC5	P16467	563 aa	Known RBP	6.51	□□□□□ -1.37
SNF11	YDR073W	RER1	P25560	188 aa		6.51	□□□□□ -1.37
SNF11	YDR073W	RPC82	P32349	654 aa		6.51	□□□□□ -1.37
SNF11	YDR073W	CCZ1	P38273	704 aa		6.51	□□□□□ -1.37
SNF11	YDR073W	RRT14	P40470	206 aa		6.51	□□□□□ -1.37
SNF11	YDR073W	MTC3	P53077	123 aa		6.51	□□□□□ -1.37
SNF11	YDR073W	CEG1	Q01159	459 aa	Predicted RBP	6.51	□□□□□ -1.37
SNF11	YDR073W	SPC19	Q03954	165 aa		6.51	□□□□□ -1.37
SNF11	YDR073W	PRC1	P00729	532 aa		6.5	□□□□□ -1.37
SNF11	YDR073W	KNS1	P32350	737 aa	Predicted RBP	6.5	□□□□□ -1.37
SNF11	YDR073W	PIK1	P39104	1066 aa		6.5	□□□□□ -1.37
SNF11	YDR073W	CEP3	P40969	608 aa		6.5	□□□□□ -1.37
SNF11	YDR073W	PUS7	Q08647	676 aa	Known RBP	6.5	□□□□□ -1.37
SNF11	YDR073W	OSW2	Q12202	724 aa		6.5	□□□□□ -1.37
SNF11	YDR073W	CLF1	Q12309	687 aa	Predicted RBP	6.5	□□□□□ -1.37
SNF11	YDR073W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	6.5	□□□□□ -1.37	not detected
SNF11	YDR073W	KCS1	Q12494	1050 aa		6.5	□□□□□ -1.37
SNF11	YDR073W	HOP1	P20050	605 aa		6.49	□□□□□ -1.37
SNF11	YDR073W	GPT2	P36148	743 aa		6.49	□□□□□ -1.37
SNF11	YDR073W	YKR075C	P36155	307 aa		6.49	□□□□□ -1.37
SNF11	YDR073W	FAT1	P38225	669 aa		6.49	□□□□□ -1.37
SNF11	YDR073W	PPE1	P38796	400 aa		6.49	□□□□□ -1.37
SNF11	YDR073W	RAD26	P40352	1085 aa		6.49	□□□□□ -1.37
SNF11	YDR073W	SBE2	P42223	864 aa	Known RBP	6.49	□□□□□ -1.37
SNF11	YDR073W	OMS1	Q06668	471 aa		6.49	□□□□□ -1.37
SNF11	YDR073W	MED1	Q12321	566 aa		6.49	□□□□□ -1.37
SNF11	YDR073W	NOT3	P06102	836 aa	Known RBP	6.48	□□□□□ -1.37
SNF11	YDR073W	PHO3	P24031	467 aa		6.48	□□□□□ -1.37
SNF11	YDR073W	IMP2'	P32351	346 aa		6.48	□□□□□ -1.37
SNF11	YDR073W	TFC3	P34111	1160 aa		6.48	□□□□□ -1.37
SNF11	YDR073W	MDJ1	P35191	511 aa		6.48	□□□□□ -1.37
SNF11	YDR073W	SDS22	P36047	338 aa		6.48	□□□□□ -1.37
SNF11	YDR073W	YIL092W	P40497	633 aa		6.48	□□□□□ -1.37
SNF11	YDR073W	YIR007W	P40566	764 aa		6.48	□□□□□ -1.37
SNF11	YDR073W	PUS2	P53167	370 aa		6.48	□□□□□ -1.37
SNF11	YDR073W	MEP3	P53390	489 aa		6.48	□□□□□ -1.37
SNF11	YDR073W	HLR1	Q04429	423 aa		6.48	□□□□□ -1.37
SNF11	YDR073W	GPM1	P00950	247 aa	Known RBP	6.47	□□□□□ -1.37
SNF11	YDR073W	ACE2	P21192	770 aa		6.47	□□□□□ -1.37
SNF11	YDR073W	NGG1	P32494	702 aa		6.47	□□□□□ -1.37
SNF11	YDR073W	YKR018C	P36114	725 aa		6.47	□□□□□ -1.37
SNF11	YDR073W	ESL1	P40456	1118 aa		6.47	□□□□□ -1.37
SNF11	YDR073W	MOT3	P54785	490 aa	Known RBP	6.47	□□□□□ -1.37
SNF11	YDR073W	GPD1	Q00055	391 aa	Known RBP	6.47	□□□□□ -1.37
SNF11	YDR073W	CIA1	Q05583	330 aa		6.47	□□□□□ -1.37
SNF11	YDR073W	RSB1	Q08417	382 aa		6.47	□□□□□ -1.37
SNF11	YDR073W	CWC2	Q12046	339 aa	Predicted RBP	6.47	□□□□□ -1.37
SNF11	YDR073W	DCS2	Q12123	353 aa		6.47	□□□□□ -1.37
SNF11	YDR073W	YOR022C	Q12204	715 aa		6.47	□□□□□ -1.37
SNF11	YDR073W	ARP7	Q12406	477 aa		6.47	□□□□□ -1.37
SNF11	YDR073W	NSI1	Q12457	570 aa		6.47	□□□□□ -1.37

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