RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C YPL034WQ03083 165 aa4.51□□□□□ -1.69
PRP11YDL043C XYL2Q07993 356 aa4.51□□□□□ -1.69
PRP11YDL043C RMP1Q12530 201 aa4.51□□□□□ -1.69
PRP11YDL043C ENA5Q12691 1091 aa4.51□□□□□ -1.69
PRP11YDL043C GAL1P04385 528 aa4.5□□□□□ -1.69
PRP11YDL043C NOT3P06102 836 aaKnown RBP4.5□□□□□ -1.69
PRP11YDL043C PGI1P12709 554 aaKnown RBP4.5□□□□□ -1.69
PRP11YDL043C PTP2P29461 750 aa4.5□□□□□ -1.69
PRP11YDL043C HEM12P32347 362 aaPredicted RBP4.5□□□□□ -1.69
PRP11YDL043C DAL3P32459 195 aa4.5□□□□□ -1.69
PRP11YDL043C WHI3P34761 661 aaKnown RBP4.5□□□□□ -1.69
PRP11YDL043C BIT2P38346 545 aa4.5□□□□□ -1.69
PRP11YDL043C IES5P40060 125 aa4.5□□□□□ -1.69
PRP11YDL043C CIT3P43635 486 aa4.5□□□□□ -1.69
PRP11YDL043C ARI1P53111 347 aaKnown RBP4.5□□□□□ -1.69
PRP11YDL043C YDL121CQ07541 149 aa4.5□□□□□ -1.69
PRP11YDL043C YOR059CQ08448 450 aaKnown RBP4.5□□□□□ -1.69
PRP11YDL043C GLT1Q12680 2145 aaKnown RBP4.5□□□□□ -1.69
PRP11YDL043C RPS9AO13516 197 aaKnown RBP4.49□□□□□ -1.69
PRP11YDL043C NAM7P30771 971 aaKnown RBP4.49□□□□□ -1.69
PRP11YDL043C CBF5P33322 483 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
PRP11YDL043C STE13P33894 931 aa4.49□□□□□ -1.69
PRP11YDL043C NIC96P34077 839 aa4.49□□□□□ -1.69
PRP11YDL043C SET5P38890 526 aaKnown RBP4.49□□□□□ -1.69
PRP11YDL043C PEX7P39108 375 aa4.49□□□□□ -1.69
PRP11YDL043C EMP65P40085 556 aa4.49□□□□□ -1.69
PRP11YDL043C SHR5P41912 237 aa4.49□□□□□ -1.69
PRP11YDL043C SPC105P53148 917 aa4.49□□□□□ -1.69
PRP11YDL043C NPY1P53164 384 aa4.49□□□□□ -1.69
PRP11YDL043C RCM1P53972 490 aa4.49□□□□□ -1.69
PRP11YDL043C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
PRP11YDL043C VPS30Q02948 557 aa4.49□□□□□ -1.69
PRP11YDL043C PHM6Q05637 104 aa4.49□□□□□ -1.69
PRP11YDL043C RRP6Q12149 733 aaKnown RBP4.49□□□□□ -1.69
PRP11YDL043C KCC4P25389 1037 aa4.48□□□□□ -1.69
PRP11YDL043C YKL133CP36066 463 aa4.48□□□□□ -1.69
PRP11YDL043C SAP190P36123 1033 aa4.48□□□□□ -1.69
PRP11YDL043C RRP8P38961 392 aaKnown RBP4.48□□□□□ -1.69
PRP11YDL043C HXT6P39003 570 aaKnown RBP4.48□□□□□ -1.69
PRP11YDL043C HXT7P39004 570 aa4.48□□□□□ -1.69
PRP11YDL043C RPT2P40327 437 aaKnown RBP4.48□□□□□ -1.69
PRP11YDL043C CEP3P40969 608 aa4.48□□□□□ -1.69
PRP11YDL043C RAI1P53063 387 aaKnown RBP4.48□□□□□ -1.69
PRP11YDL043C SLD3P53135 668 aa4.48□□□□□ -1.69
PRP11YDL043C YKR011CQ02209 353 aa4.48□□□□□ -1.69
PRP11YDL043C SKY1Q03656 742 aa4.48□□□□□ -1.69
PRP11YDL043C GRX3Q03835 250 aa4.48□□□□□ -1.69
PRP11YDL043C MLC2Q06580 163 aa4.48□□□□□ -1.69
PRP11YDL043C PRC1P00729 532 aa4.47□□□□□ -1.69
PRP11YDL043C RPS21AP0C0V8 87 aaKnown RBP4.47□□□□□ -1.69
PRP11YDL043C APL1P27351 700 aa4.47□□□□□ -1.69
PRP11YDL043C TYE7P33122 291 aaPredicted RBP4.47□□□□□ -1.69
PRP11YDL043C YKR051WP36142 418 aa4.47□□□□□ -1.69
PRP11YDL043C RFC5P38251 354 aa4.47□□□□□ -1.69
PRP11YDL043C RIM4P38741 713 aa4.47□□□□□ -1.69
PRP11YDL043C AKR1P39010 764 aa4.47□□□□□ -1.69
PRP11YDL043C OYE3P41816 400 aaPredicted RBP4.47□□□□□ -1.69
PRP11YDL043C YFL052WP43551 465 aa4.47□□□□□ -1.69
PRP11YDL043C RSC8P43609 557 aaKnown RBP4.47□□□□□ -1.69
PRP11YDL043C PRY1P47032 299 aa4.47□□□□□ -1.69
PRP11YDL043C BNA2P47125 453 aa4.47□□□□□ -1.69
PRP11YDL043C INP52P50942 1183 aa4.47□□□□□ -1.69
PRP11YDL043C NNF2P53253 936 aa4.47□□□□□ -1.69
PRP11YDL043C YGR130CP53278 816 aa4.47□□□□□ -1.69
PRP11YDL043C PTA1Q01329 785 aaPredicted RBP4.47□□□□□ -1.69
PRP11YDL043C YHM2Q04013 314 aa4.47□□□□□ -1.69
PRP11YDL043C CRR1Q05790 422 aa4.47□□□□□ -1.69
PRP11YDL043C PUF3Q07807 879 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
PRP11YDL043C TRE1Q08919 783 aa4.47□□□□□ -1.69
PRP11YDL043C THI21Q08975 551 aa4.47□□□□□ -1.69
PRP11YDL043C HFI1Q12060 488 aa4.47□□□□□ -1.69
PRP11YDL043C NKP1Q12493 238 aa4.47□□□□□ -1.69
PRP11YDL043C APM4Q99186 491 aa4.47□□□□□ -1.69
PRP11YDL043C SPS1P08458 490 aa4.46□□□□□ -1.7
PRP11YDL043C KIN2P13186 1147 aaKnown RBP4.46□□□□□ -1.7
PRP11YDL043C COX11P19516 300 aaKnown RBP4.46□□□□□ -1.7
PRP11YDL043C AIM26P32858 118 aa4.46□□□□□ -1.7
PRP11YDL043C OMA1P36163 345 aa4.46□□□□□ -1.7
PRP11YDL043C ABZ1P37254 787 aaPredicted RBP4.46□□□□□ -1.7
PRP11YDL043C PAP2P53632 584 aaKnown RBP4.46□□□□□ -1.7
PRP11YDL043C RPN7Q06103 429 aaKnown RBP4.46□□□□□ -1.7
PRP11YDL043C YPR027CQ12079 277 aa4.46□□□□□ -1.7
PRP11YDL043C YOR022CQ12204 715 aa4.46□□□□□ -1.7
PRP11YDL043C RPS21BQ3E754 87 aaKnown RBP4.46□□□□□ -1.7
PRP11YDL043C YLR149CQ99296 730 aa4.46□□□□□ -1.7
PRP11YDL043C HSF1P10961 833 aa4.45□□□□□ -1.7
PRP11YDL043C SPC110P32380 944 aa4.45□□□□□ -1.7
PRP11YDL043C SRP101P32916 621 aa4.45□□□□□ -1.7
PRP11YDL043C PTH2P34222 208 aa4.45□□□□□ -1.7
PRP11YDL043C OAF3P36023 863 aa4.45□□□□□ -1.7
PRP11YDL043C YKR018CP36114 725 aa4.45□□□□□ -1.7
PRP11YDL043C MAL31P38156 614 aa4.45□□□□□ -1.7
PRP11YDL043C PTC7P38797 343 aa4.45□□□□□ -1.7
PRP11YDL043C GTS1P40956 396 aa4.45□□□□□ -1.7
PRP11YDL043C ZIP2P53061 704 aa4.45□□□□□ -1.7
PRP11YDL043C PUS2P53167 370 aa4.45□□□□□ -1.7
PRP11YDL043C MSC2Q03455 724 aa4.45□□□□□ -1.7
PRP11YDL043C CDA1Q06702 301 aa4.45□□□□□ -1.7
PRP11YDL043C BRE1Q07457 700 aaKnown RBP4.45□□□□□ -1.7
PRP11YDL043C PEX15Q08215 383 aa4.45□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms