RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHC1	YBR235W	LSM12	P38828	187 aa	Known RBP	4.87	□□□□□ -1.63
VHC1	YBR235W	TIF4631	P39935	952 aa	Known RBP	4.87	□□□□□ -1.63
VHC1	YBR235W	ZRG8	P40021	1076 aa		4.87	□□□□□ -1.63
VHC1	YBR235W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
VHC1	YBR235W	IRC6	P43615	237 aa		4.87	□□□□□ -1.63
VHC1	YBR235W	SPC105	P53148	917 aa		4.87	□□□□□ -1.63
VHC1	YBR235W	MDR1	P53258	950 aa		4.87	□□□□□ -1.63
VHC1	YBR235W	MEC3	Q02574	474 aa		4.87	□□□□□ -1.63
VHC1	YBR235W	DBP9	Q06218	594 aa	Known RBP	4.87	□□□□□ -1.63
VHC1	YBR235W	SYO1	Q07395	620 aa		4.87	□□□□□ -1.63
VHC1	YBR235W	KRE5	P22023	1365 aa		4.87	□□□□□ -1.63
VHC1	YBR235W	NCP1	P16603	691 aa	Known RBP	4.87	□□□□□ -1.63
VHC1	YBR235W	ALG1	P16661	449 aa		4.87	□□□□□ -1.63
VHC1	YBR235W	DBP3	P20447	523 aa	Known RBP	4.87	□□□□□ -1.63
VHC1	YBR235W	ADE2	P21264	571 aa	Known RBP	4.87	□□□□□ -1.63
VHC1	YBR235W	KIP2	P28743	706 aa		4.87	□□□□□ -1.63
VHC1	YBR235W	SLX5	P32828	619 aa	Known RBP	4.87	□□□□□ -1.63
VHC1	YBR235W	YKL050C	P35736	922 aa		4.87	□□□□□ -1.63
VHC1	YBR235W	YJL181W	P46987	611 aa		4.87	□□□□□ -1.63
VHC1	YBR235W	NUP84	P52891	726 aa		4.87	□□□□□ -1.63
VHC1	YBR235W	HFD1	Q04458	532 aa		4.87	□□□□□ -1.63
VHC1	YBR235W	POB3	Q04636	552 aa	Known RBP	4.87	□□□□□ -1.63
VHC1	YBR235W	PEX15	Q08215	383 aa		4.87	□□□□□ -1.63
VHC1	YBR235W	ATG29	Q12092	213 aa		4.87	□□□□□ -1.63
VHC1	YBR235W	SCM3	Q12334	223 aa		4.87	□□□□□ -1.63
VHC1	YBR235W	RAD57	P25301	460 aa		4.86	□□□□□ -1.63
VHC1	YBR235W	PPH3	P32345	308 aa		4.86	□□□□□ -1.63
VHC1	YBR235W	PPX1	P38698	397 aa		4.86	□□□□□ -1.63
VHC1	YBR235W	BOI2	P39969	1040 aa		4.86	□□□□□ -1.63
VHC1	YBR235W	KAP114	P53067	1004 aa		4.86	□□□□□ -1.63
VHC1	YBR235W	YDR179W-A	Q03983	463 aa		4.86	□□□□□ -1.63
VHC1	YBR235W	DYN3	Q04949	312 aa		4.86	□□□□□ -1.63
VHC1	YBR235W	VPS38	Q05919	439 aa		4.86	□□□□□ -1.63
VHC1	YBR235W	DXO1	Q06349	442 aa		4.86	□□□□□ -1.63
VHC1	YBR235W	BRX1	Q08235	291 aa	Known RBP	4.86	□□□□□ -1.63
VHC1	YBR235W	SGT1	Q08446	395 aa		4.86	□□□□□ -1.63
VHC1	YBR235W	RSA1	Q08932	381 aa		4.86	□□□□□ -1.63
VHC1	YBR235W	DPH6	Q12429	685 aa		4.86	□□□□□ -1.63
VHC1	YBR235W	HSF1	P10961	833 aa		4.86	□□□□□ -1.63
VHC1	YBR235W	SFL1	P20134	766 aa		4.86	□□□□□ -1.63
VHC1	YBR235W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
VHC1	YBR235W	CCT2	P39076	527 aa	Known RBP	4.86	□□□□□ -1.63
VHC1	YBR235W	VPS8	P39702	1274 aa		4.86	□□□□□ -1.63
VHC1	YBR235W	PXA1	P41909	870 aa		4.86	□□□□□ -1.63
VHC1	YBR235W	ZRG17	P53735	605 aa		4.86	□□□□□ -1.63
VHC1	YBR235W	HER2	Q03557	464 aa		4.86	□□□□□ -1.63
VHC1	YBR235W	RNH1	Q04740	348 aa		4.86	□□□□□ -1.63
VHC1	YBR235W	SMC5	Q08204	1093 aa		4.86	□□□□□ -1.63
VHC1	YBR235W	MLP1	Q02455	1875 aa	Known RBP	4.86	□□□□□ -1.63
VHC1	YBR235W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
VHC1	YBR235W	MDJ1	P35191	511 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	ATP3	P38077	311 aa	Known RBP	4.85	□□□□□ -1.63
VHC1	YBR235W	MAL31	P38156	614 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	MAL33	P38157	468 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	PFF1	P38244	976 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	YHL012W	P38709	493 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	DLD3	P39976	496 aa	Known RBP	4.85	□□□□□ -1.63
VHC1	YBR235W	YER186C	P40101	306 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	YIL077C	P40508	320 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	SAP185	P40856	1058 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	NOP9	P47077	666 aa	Known RBP	4.85	□□□□□ -1.63
VHC1	YBR235W	FCP1	Q03254	732 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	VAC14	Q06708	880 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	YEH2	Q07950	538 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	TIP41	Q12199	356 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	MPH2	P0CD99	609 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	CLN2	P20438	545 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	VMA4	P22203	233 aa	Known RBP	4.85	□□□□□ -1.63
VHC1	YBR235W	PKC1	P24583	1151 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	YKL091C	P33324	310 aa	Known RBP	4.85	□□□□□ -1.63
VHC1	YBR235W	RSM22	P36056	628 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	VTC4	P47075	721 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	MAL11	P53048	616 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	FYV6	P53913	173 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	YMR010W	Q03687	405 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	YMR018W	Q04364	514 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	YPR022C	Q12139	1133 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	ATP16	Q12165	160 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	ULS1	Q08562	1619 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	TY1B-BR	Q12193	1756 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	TY1B-GR3	Q12316	1755 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	TY1B-OR	Q92393	1755 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	KAR1	P11927	433 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	NMT1	P14743	455 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	ISY1	P21374	235 aa	Predicted RBP	4.85	□□□□□ -1.63
VHC1	YBR235W	CLB2	P24869	491 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	YME1	P32795	747 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	OAF3	P36023	863 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	MRPL17	P36528	281 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	APE4	P38821	490 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	KEL1	P38853	1164 aa	Known RBP	4.85	□□□□□ -1.63
VHC1	YBR235W	MNT3	P40549	630 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	UTP8	P53276	713 aa	Known RBP	4.85	□□□□□ -1.63
VHC1	YBR235W	SLT2	Q00772	484 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	SRP1	Q02821	542 aa	Known RBP	4.85	□□□□□ -1.63
VHC1	YBR235W	BUD22	Q04347	519 aa	Known RBP	4.85	□□□□□ -1.63
VHC1	YBR235W	GIC2	Q06648	383 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	YLL007C	Q07799	665 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	SIL1	Q08199	421 aa		4.85	□□□□□ -1.63
VHC1	YBR235W	VIK1	Q12045	647 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms