RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeast

Gene SLX1, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX1	YBR228W	URA1	P28272	314 aa	Predicted RBP	6.27	□□□□□ -1.41
SLX1	YBR228W	SEC21	P32074	935 aa	Known RBP	6.27	□□□□□ -1.41
SLX1	YBR228W	KTR4	P38131	464 aa		6.27	□□□□□ -1.41
SLX1	YBR228W	PUS2	P53167	370 aa		6.27	□□□□□ -1.41
SLX1	YBR228W	YKR011C	Q02209	353 aa		6.27	□□□□□ -1.41
SLX1	YBR228W	NAN1	Q02931	896 aa	Known RBP	6.27	□□□□□ -1.41
SLX1	YBR228W	SPO75	Q07798	868 aa		6.27	□□□□□ -1.41
SLX1	YBR228W	MLP2	P40457	1679 aa		6.26	□□□□□ -1.41
SLX1	YBR228W	NTE1	Q04958	1679 aa		6.26	□□□□□ -1.41
SLX1	YBR228W	TRP4	P07285	380 aa	Predicted RBP	6.26	□□□□□ -1.41
SLX1	YBR228W	SDP1	P40479	209 aa		6.26	□□□□□ -1.41
SLX1	YBR228W	ERP6	P53198	216 aa		6.26	□□□□□ -1.41
SLX1	YBR228W	BUL2	Q03758	920 aa	Known RBP	6.26	□□□□□ -1.41
SLX1	YBR228W	ARE1	P25628	610 aa		6.25	□□□□□ -1.41
SLX1	YBR228W	RNT1	Q02555	471 aa		6.25	□□□□□ -1.41
SLX1	YBR228W	SLU7	Q02775	382 aa	Known RBP	6.25	□□□□□ -1.41
SLX1	YBR228W	SWM1	Q12379	170 aa		6.25	□□□□□ -1.41
SLX1	YBR228W	RPO21	P04050	1733 aa	Known RBP	6.25	□□□□□ -1.41
SLX1	YBR228W	TSC11	P40061	1430 aa		6.25	□□□□□ -1.41
SLX1	YBR228W	RPL8B	P29453	256 aa	Known RBP	6.24	□□□□□ -1.41
SLX1	YBR228W	OSH2	Q12451	1283 aa		6.24	□□□□□ -1.41
SLX1	YBR228W	TRM732	Q03496	1420 aa		6.24	□□□□□ -1.41
SLX1	YBR228W	MSD1	P15179	658 aa	Known RBP	6.23	□□□□□ -1.41
SLX1	YBR228W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	6.23	□□□□□ -1.41	not detected
SLX1	YBR228W	UTP8	P53276	713 aa	Known RBP	6.23	□□□□□ -1.41
SLX1	YBR228W	HDA1	P53973	706 aa		6.23	□□□□□ -1.41
SLX1	YBR228W	TRM13	Q12383	476 aa		6.23	□□□□□ -1.41
SLX1	YBR228W	SNQ2	P32568	1501 aa	Known RBP	6.23	□□□□□ -1.41
SLX1	YBR228W	FBP1	P09201	348 aa		6.22	□□□□□ -1.41
SLX1	YBR228W	MPH2	P0CD99	609 aa		6.22	□□□□□ -1.41
SLX1	YBR228W	RAD4	P14736	754 aa		6.22	□□□□□ -1.41
SLX1	YBR228W	SCT1	P32784	759 aa		6.22	□□□□□ -1.41
SLX1	YBR228W	CTF8	P38877	133 aa		6.22	□□□□□ -1.41
SLX1	YBR228W	MCH5	Q08777	521 aa		6.22	□□□□□ -1.41
SLX1	YBR228W	HBN1	Q96VH4	193 aa		6.22	□□□□□ -1.41
SLX1	YBR228W	ULS1	Q08562	1619 aa		6.21	□□□□□ -1.41
SLX1	YBR228W	YRF1-1	P0CX20	1796 aa		6.21	□□□□□ -1.41
SLX1	YBR228W	YRF1-5	P0CX21	1796 aa		6.21	□□□□□ -1.41
SLX1	YBR228W	YRF1-8	P0CX22	1796 aa		6.21	□□□□□ -1.41
SLX1	YBR228W	PET10	P36139	283 aa		6.21	□□□□□ -1.42
SLX1	YBR228W	YHR078W	P38799	552 aa		6.21	□□□□□ -1.42
SLX1	YBR228W	OMS1	Q06668	471 aa		6.21	□□□□□ -1.42
SLX1	YBR228W	MET5	P47169	1442 aa		6.21	□□□□□ -1.42
SLX1	YBR228W	ALG7	P07286	448 aa		6.2	□□□□□ -1.42
SLX1	YBR228W	NIT3	P49954	291 aa		6.2	□□□□□ -1.42
SLX1	YBR228W	STB4	P50104	949 aa		6.2	□□□□□ -1.42
SLX1	YBR228W	TRM11	Q12463	433 aa		6.2	□□□□□ -1.42
SLX1	YBR228W	MET3	P08536	511 aa		6.19	□□□□□ -1.42
SLX1	YBR228W	TUB3	P09734	445 aa	Known RBP	6.19	□□□□□ -1.42
SLX1	YBR228W	HSP60	P19882	572 aa	Known RBP	6.19	□□□□□ -1.42
SLX1	YBR228W	CTF13	P35203	478 aa		6.19	□□□□□ -1.42
SLX1	YBR228W	TIM54	P47045	478 aa		6.19	□□□□□ -1.42
SLX1	YBR228W	TIM44	Q01852	431 aa		6.19	□□□□□ -1.42
SLX1	YBR228W	ENV7	Q12003	364 aa		6.19	□□□□□ -1.42
SLX1	YBR228W	ACF2	Q12168	779 aa		6.19	□□□□□ -1.42
SLX1	YBR228W	NUP159	P40477	1460 aa		6.18	□□□□□ -1.42
SLX1	YBR228W	PPR1	P07272	904 aa	Predicted RBP	6.18	□□□□□ -1.42
SLX1	YBR228W	TOP3	P13099	656 aa		6.18	□□□□□ -1.42
SLX1	YBR228W	YGR125W	P53273	1036 aa		6.18	□□□□□ -1.42
SLX1	YBR228W	PDR15	Q04182	1529 aa	Known RBP	6.18	□□□□□ -1.42
SLX1	YBR228W	STH1	P32597	1359 aa		6.18	□□□□□ -1.42
SLX1	YBR228W	CYS3	P31373	394 aa	Known RBP	6.17	□□□□□ -1.42
SLX1	YBR228W	RPP1	P38786	293 aa		6.17	□□□□□ -1.42
SLX1	YBR228W	VHR1	P40522	640 aa		6.17	□□□□□ -1.42
SLX1	YBR228W	ERG5	P54781	538 aa		6.17	□□□□□ -1.42
SLX1	YBR228W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	6.17	□□□□□ -1.42	not detected
SLX1	YBR228W	MUK1	Q02866	612 aa		6.17	□□□□□ -1.42
SLX1	YBR228W	DLT1	Q04216	342 aa		6.17	□□□□□ -1.42
SLX1	YBR228W	YDL124W	Q07551	312 aa	Known RBP	6.17	□□□□□ -1.42
SLX1	YBR228W	HAL9	Q12180	1030 aa		6.17	□□□□□ -1.42
SLX1	YBR228W	SNT2	P53127	1403 aa		6.16	□□□□□ -1.42
SLX1	YBR228W	ELO3	P40319	345 aa		6.16	□□□□□ -1.42
SLX1	YBR228W	FKH2	P41813	862 aa		6.16	□□□□□ -1.42
SLX1	YBR228W	DUS1	P53759	423 aa	Known RBP	6.16	□□□□□ -1.42
SLX1	YBR228W	FRE5	Q08908	694 aa		6.16	□□□□□ -1.42
SLX1	YBR228W	YOR022C	Q12204	715 aa		6.16	□□□□□ -1.42
SLX1	YBR228W	PRC1	P00729	532 aa		6.15	□□□□□ -1.42
SLX1	YBR228W	TOM70	P07213	617 aa	Known RBP	6.15	□□□□□ -1.42
SLX1	YBR228W	DAL7	P21826	554 aa		6.15	□□□□□ -1.42
SLX1	YBR228W	SAP190	P36123	1033 aa		6.15	□□□□□ -1.42
SLX1	YBR228W	NOP7	P53261	605 aa	Known RBP	6.15	□□□□□ -1.42
SLX1	YBR228W	NOG2	P53742	486 aa	Known RBP	6.15	□□□□□ -1.42
SLX1	YBR228W	PKH1	Q03407	766 aa		6.15	□□□□□ -1.42
SLX1	YBR228W	TMN2	Q04562	672 aa		6.15	□□□□□ -1.42
SLX1	YBR228W	CIT1	P00890	479 aa		6.14	□□□□□ -1.43
SLX1	YBR228W	CAF20	P12962	161 aa	Known RBP	6.14	□□□□□ -1.43
SLX1	YBR228W	HUL4	P40985	892 aa		6.14	□□□□□ -1.43
SLX1	YBR228W	STU2	P46675	888 aa		6.14	□□□□□ -1.43
SLX1	YBR228W	TAD1	P53065	400 aa		6.14	□□□□□ -1.43
SLX1	YBR228W	PZF1	P39933	429 aa		6.13	□□□□□ -1.43
SLX1	YBR228W	UBP6	P43593	499 aa	Known RBP	6.13	□□□□□ -1.43
SLX1	YBR228W	MRPS35	P53292	345 aa		6.13	□□□□□ -1.43
SLX1	YBR228W	PRP4	P20053	465 aa	Known RBP	6.12	□□□□□ -1.43
SLX1	YBR228W	CRR1	Q05790	422 aa		6.12	□□□□□ -1.43
SLX1	YBR228W	SPO14	P36126	1683 aa		6.11	□□□□□ -1.43
SLX1	YBR228W	GEA2	P39993	1459 aa	Known RBP	6.11	□□□□□ -1.43
SLX1	YBR228W	PPS1	P38148	807 aa		6.11	□□□□□ -1.43
SLX1	YBR228W	SAK1	P38990	1142 aa		6.11	□□□□□ -1.43
SLX1	YBR228W	MUP1	P50276	574 aa		6.11	□□□□□ -1.43
SLX1	YBR228W	ASI2	P53895	289 aa		6.11	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms