RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	GCN2	P15442	1659 aa		4.2	□□□□□ -1.74
CMD1	YBR109C	NUP159	P40477	1460 aa		4.2	□□□□□ -1.74
CMD1	YBR109C	CDC9	P04819	755 aa		4.2	□□□□□ -1.74
CMD1	YBR109C	MPH2	P0CD99	609 aa		4.2	□□□□□ -1.74
CMD1	YBR109C	GSY1	P23337	708 aa		4.2	□□□□□ -1.74
CMD1	YBR109C	VBA3	P25594	458 aa		4.2	□□□□□ -1.74
CMD1	YBR109C	SFP1	P32432	683 aa		4.2	□□□□□ -1.74
CMD1	YBR109C	FOL2	P51601	243 aa	Known RBP	4.2	□□□□□ -1.74
CMD1	YBR109C	DAM1	P53267	343 aa		4.2	□□□□□ -1.74
CMD1	YBR109C	ATP25	Q03153	612 aa		4.2	□□□□□ -1.74
CMD1	YBR109C	MSC2	Q03455	724 aa		4.2	□□□□□ -1.74
CMD1	YBR109C	RSM24	Q03976	319 aa		4.2	□□□□□ -1.74
CMD1	YBR109C	MET7	Q08645	548 aa		4.2	□□□□□ -1.74
CMD1	YBR109C	TY1B-BR	Q12193	1756 aa		4.19	□□□□□ -1.74
CMD1	YBR109C	TY1B-GR3	Q12316	1755 aa		4.19	□□□□□ -1.74
CMD1	YBR109C	TY1B-OR	Q92393	1755 aa		4.19	□□□□□ -1.74
CMD1	YBR109C	NOT3	P06102	836 aa	Known RBP	4.19	□□□□□ -1.74
CMD1	YBR109C	MTC2	P34246	357 aa		4.19	□□□□□ -1.74
CMD1	YBR109C	NIT3	P49954	291 aa		4.19	□□□□□ -1.74
CMD1	YBR109C	ZDS1	P50111	915 aa	Known RBP	4.19	□□□□□ -1.74
CMD1	YBR109C	YGL081W	P53156	320 aa		4.19	□□□□□ -1.74
CMD1	YBR109C	ENV11	P53246	860 aa		4.19	□□□□□ -1.74
CMD1	YBR109C	YNL193W	P53870	558 aa		4.19	□□□□□ -1.74
CMD1	YBR109C	YLR001C	Q07895	862 aa		4.19	□□□□□ -1.74
CMD1	YBR109C	DNF1	P32660	1571 aa		4.19	□□□□□ -1.74
CMD1	YBR109C	SRD1	P09007	221 aa		4.18	□□□□□ -1.74
CMD1	YBR109C	CMP2	P14747	604 aa		4.18	□□□□□ -1.74
CMD1	YBR109C	TSR4	P25040	408 aa		4.18	□□□□□ -1.74
CMD1	YBR109C	SRP101	P32916	621 aa		4.18	□□□□□ -1.74
CMD1	YBR109C	CRP1	P38845	465 aa	Known RBP	4.18	□□□□□ -1.74
CMD1	YBR109C	UBP12	P39538	1254 aa		4.18	□□□□□ -1.74
CMD1	YBR109C	SNM1	P40993	198 aa		4.18	□□□□□ -1.74
CMD1	YBR109C	IOC4	Q04213	475 aa		4.18	□□□□□ -1.74
CMD1	YBR109C	RSC3	Q06639	885 aa		4.18	□□□□□ -1.74
CMD1	YBR109C	CDA1	Q06702	301 aa		4.18	□□□□□ -1.74
CMD1	YBR109C	BUD21	Q08492	214 aa	Predicted RBP	4.18	□□□□□ -1.74
CMD1	YBR109C	YBT1	P32386	1661 aa		4.18	□□□□□ -1.74
CMD1	YBR109C	TY3B-G	Q99315	1547 aa		4.17	□□□□□ -1.74
CMD1	YBR109C	NTE1	Q04958	1679 aa		4.17	□□□□□ -1.74
CMD1	YBR109C	CYC1	P00044	109 aa	Predicted RBP	4.17	□□□□□ -1.74
CMD1	YBR109C	GAL10	P04397	699 aa		4.17	□□□□□ -1.74
CMD1	YBR109C	RFA1	P22336	621 aa	Known RBP	4.17	□□□□□ -1.74
CMD1	YBR109C	PER1	P25625	357 aa		4.17	□□□□□ -1.74
CMD1	YBR109C	URA1	P28272	314 aa	Predicted RBP	4.17	□□□□□ -1.74
CMD1	YBR109C	GRX4	P32642	244 aa		4.17	□□□□□ -1.74
CMD1	YBR109C	RAI1	P53063	387 aa	Known RBP	4.17	□□□□□ -1.74
CMD1	YBR109C	YNR029C	P53729	429 aa	Known RBP	4.17	□□□□□ -1.74
CMD1	YBR109C	YDR514C	Q04408	483 aa		4.17	□□□□□ -1.74
CMD1	YBR109C	REH1	Q06709	432 aa		4.17	□□□□□ -1.74
CMD1	YBR109C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
CMD1	YBR109C	IRC20	Q06554	1556 aa		4.17	□□□□□ -1.74
CMD1	YBR109C	TY1B-JR2	P47100	1755 aa	Known RBP	4.17	□□□□□ -1.74
CMD1	YBR109C	TY1B-ER2	Q03619	1755 aa		4.17	□□□□□ -1.74
CMD1	YBR109C	TY1B-MR1	Q04214	1755 aa		4.17	□□□□□ -1.74
CMD1	YBR109C	TY1B-MR2	Q04670	1755 aa	Known RBP	4.17	□□□□□ -1.74
CMD1	YBR109C	TY1B-LR1	Q12088	1755 aa	Known RBP	4.17	□□□□□ -1.74
CMD1	YBR109C	TY1B-NL1	Q12112	1755 aa		4.17	□□□□□ -1.74
CMD1	YBR109C	TY1B-GR1	Q12141	1755 aa		4.17	□□□□□ -1.74
CMD1	YBR109C	TY1B-BL	Q12490	1755 aa		4.17	□□□□□ -1.74
CMD1	YBR109C	MHP1	P43638	1398 aa		4.16	□□□□□ -1.74
CMD1	YBR109C	RAD18	P10862	487 aa		4.16	□□□□□ -1.74
CMD1	YBR109C	HSF1	P10961	833 aa		4.16	□□□□□ -1.74
CMD1	YBR109C	DAL7	P21826	554 aa		4.16	□□□□□ -1.74
CMD1	YBR109C	STE13	P33894	931 aa		4.16	□□□□□ -1.74
CMD1	YBR109C	STO1	P34160	861 aa	Known RBP	4.16	□□□□□ -1.74
CMD1	YBR109C	MCD4	P36051	919 aa		4.16	□□□□□ -1.74
CMD1	YBR109C	ZRG8	P40021	1076 aa		4.16	□□□□□ -1.74
CMD1	YBR109C	CAF16	P43569	289 aa		4.16	□□□□□ -1.74
CMD1	YBR109C	HLJ1	P48353	224 aa		4.16	□□□□□ -1.74
CMD1	YBR109C	TAD1	P53065	400 aa		4.16	□□□□□ -1.74
CMD1	YBR109C	YGR012W	P53206	393 aa		4.16	□□□□□ -1.74
CMD1	YBR109C	NOG2	P53742	486 aa	Known RBP	4.16	□□□□□ -1.74
CMD1	YBR109C	HDA1	P53973	706 aa		4.16	□□□□□ -1.74
CMD1	YBR109C	LRS4	Q04087	347 aa	Known RBP	4.16	□□□□□ -1.74
CMD1	YBR109C	IQG1	Q12280	1495 aa		4.16	□□□□□ -1.74
CMD1	YBR109C	SPT7	P35177	1332 aa		4.16	□□□□□ -1.74
CMD1	YBR109C	PDR5	P33302	1511 aa	Known RBP	4.16	□□□□□ -1.74
CMD1	YBR109C	RPO21	P04050	1733 aa	Known RBP	4.15	□□□□□ -1.74
CMD1	YBR109C	ENA1	P13587	1091 aa		4.15	□□□□□ -1.75
CMD1	YBR109C	YCL002C	P25565	263 aa		4.15	□□□□□ -1.75
CMD1	YBR109C	PCL2	P25693	308 aa		4.15	□□□□□ -1.75
CMD1	YBR109C	YEL1	P34225	687 aa		4.15	□□□□□ -1.75
CMD1	YBR109C	MND2	P40577	368 aa		4.15	□□□□□ -1.75
CMD1	YBR109C	CEP3	P40969	608 aa		4.15	□□□□□ -1.75
CMD1	YBR109C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
CMD1	YBR109C	HXT16	P47185	567 aa		4.15	□□□□□ -1.75
CMD1	YBR109C	ENA2	Q01896	1091 aa		4.15	□□□□□ -1.75
CMD1	YBR109C	YKR011C	Q02209	353 aa		4.15	□□□□□ -1.75
CMD1	YBR109C	YDR132C	Q03900	495 aa		4.15	□□□□□ -1.75
CMD1	YBR109C	ENA5	Q12691	1091 aa		4.15	□□□□□ -1.75
CMD1	YBR109C	RPD3	P32561	433 aa		4.14	□□□□□ -1.75
CMD1	YBR109C	TYE7	P33122	291 aa	Predicted RBP	4.14	□□□□□ -1.75
CMD1	YBR109C	YEN1	P40028	759 aa		4.14	□□□□□ -1.75
CMD1	YBR109C	MGS1	P40151	587 aa		4.14	□□□□□ -1.75
CMD1	YBR109C	MET13	P53128	600 aa		4.14	□□□□□ -1.75
CMD1	YBR109C	SNP1	Q00916	300 aa	Predicted RBP	4.14	□□□□□ -1.75
CMD1	YBR109C	CTF4	Q01454	927 aa		4.14	□□□□□ -1.75
CMD1	YBR109C	VPS30	Q02948	557 aa		4.14	□□□□□ -1.75
CMD1	YBR109C	PLB2	Q03674	706 aa		4.14	□□□□□ -1.75
CMD1	YBR109C	THI73	Q07904	523 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 94 ms