RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeast

Gene PHO88, Length 567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PHO88	YBR106W	YBR182C-A	Q8TGU6	64 aa		4.18	□□□□□ -1.74
PHO88	YBR106W	HMG1	P12683	1054 aa		4.17	□□□□□ -1.74
PHO88	YBR106W	YEF3	P16521	1044 aa	Known RBP	4.17	□□□□□ -1.74
PHO88	YBR106W	MDJ1	P35191	511 aa		4.17	□□□□□ -1.74
PHO88	YBR106W	KAE1	P36132	386 aa		4.17	□□□□□ -1.74
PHO88	YBR106W	BIT2	P38346	545 aa		4.17	□□□□□ -1.74
PHO88	YBR106W	PTC7	P38797	343 aa		4.17	□□□□□ -1.74
PHO88	YBR106W	AKR1	P39010	764 aa		4.17	□□□□□ -1.74
PHO88	YBR106W	OYE3	P41816	400 aa	Predicted RBP	4.17	□□□□□ -1.74
PHO88	YBR106W	PIP2	P52960	996 aa		4.17	□□□□□ -1.74
PHO88	YBR106W	AIM14	P53109	570 aa		4.17	□□□□□ -1.74
PHO88	YBR106W	YGR012W	P53206	393 aa		4.17	□□□□□ -1.74
PHO88	YBR106W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
PHO88	YBR106W	RPN7	Q06103	429 aa	Known RBP	4.17	□□□□□ -1.74
PHO88	YBR106W	TDA6	Q06466	467 aa		4.17	□□□□□ -1.74
PHO88	YBR106W	MLC2	Q06580	163 aa		4.17	□□□□□ -1.74
PHO88	YBR106W	GAS5	Q08193	484 aa		4.17	□□□□□ -1.74
PHO88	YBR106W	PHM7	Q12252	991 aa		4.17	□□□□□ -1.74
PHO88	YBR106W	APM4	Q99186	491 aa		4.17	□□□□□ -1.74
PHO88	YBR106W	ECM5	Q03214	1411 aa		4.16	□□□□□ -1.74
PHO88	YBR106W	HSP78	P33416	811 aa		4.16	□□□□□ -1.74
PHO88	YBR106W	YKR018C	P36114	725 aa		4.16	□□□□□ -1.74
PHO88	YBR106W	POA1	P38218	177 aa		4.16	□□□□□ -1.74
PHO88	YBR106W	SBE2	P42223	864 aa	Known RBP	4.16	□□□□□ -1.74
PHO88	YBR106W	YFL054C	P43549	646 aa		4.16	□□□□□ -1.74
PHO88	YBR106W	ENP2	P48234	707 aa	Known RBP	4.16	□□□□□ -1.74
PHO88	YBR106W	ZIP2	P53061	704 aa		4.16	□□□□□ -1.74
PHO88	YBR106W	HOL1	P53389	586 aa		4.16	□□□□□ -1.74
PHO88	YBR106W	HDA1	P53973	706 aa		4.16	□□□□□ -1.74
PHO88	YBR106W	ORC4	P54791	529 aa		4.16	□□□□□ -1.74
PHO88	YBR106W	PEX15	Q08215	383 aa		4.16	□□□□□ -1.74
PHO88	YBR106W	MRS6	P32864	603 aa	Known RBP	4.15	□□□□□ -1.75
PHO88	YBR106W	TFC4	P33339	1025 aa		4.15	□□□□□ -1.75
PHO88	YBR106W	ERT1	P38140	529 aa		4.15	□□□□□ -1.75
PHO88	YBR106W	ZRG8	P40021	1076 aa		4.15	□□□□□ -1.75
PHO88	YBR106W	YIL108W	P40483	696 aa	Known RBP	4.15	□□□□□ -1.75
PHO88	YBR106W	GTS1	P40956	396 aa		4.15	□□□□□ -1.75
PHO88	YBR106W	RNR4	P49723	345 aa	Known RBP	4.15	□□□□□ -1.75
PHO88	YBR106W	NSG2	P53898	299 aa		4.15	□□□□□ -1.75
PHO88	YBR106W	ORC3	P54790	616 aa		4.15	□□□□□ -1.75
PHO88	YBR106W	MET14	Q02196	202 aa		4.15	□□□□□ -1.75
PHO88	YBR106W	ECM9	Q02202	377 aa		4.15	□□□□□ -1.75
PHO88	YBR106W	SSY1	Q03770	852 aa		4.15	□□□□□ -1.75
PHO88	YBR106W	PHM6	Q05637	104 aa		4.15	□□□□□ -1.75
PHO88	YBR106W	CRR1	Q05790	422 aa		4.15	□□□□□ -1.75
PHO88	YBR106W	THI21	Q08975	551 aa		4.15	□□□□□ -1.75
PHO88	YBR106W	HFI1	Q12060	488 aa		4.15	□□□□□ -1.75
PHO88	YBR106W	HSL1	P34244	1518 aa		4.15	□□□□□ -1.75
PHO88	YBR106W	SPT6	P23615	1451 aa	Known RBP	4.14	□□□□□ -1.75
PHO88	YBR106W	PGI1	P12709	554 aa	Known RBP	4.14	□□□□□ -1.75
PHO88	YBR106W	COX11	P19516	300 aa	Known RBP	4.14	□□□□□ -1.75
PHO88	YBR106W	TRX2	P22803	104 aa	Known RBP	4.14	□□□□□ -1.75
PHO88	YBR106W	HEM12	P32347	362 aa	Predicted RBP	4.14	□□□□□ -1.75
PHO88	YBR106W	SWE1	P32944	819 aa		4.14	□□□□□ -1.75
PHO88	YBR106W	FLR1	P38124	548 aa		4.14	□□□□□ -1.75
PHO88	YBR106W	PZF1	P39933	429 aa		4.14	□□□□□ -1.75
PHO88	YBR106W	NPP2	P39997	493 aa		4.14	□□□□□ -1.75
PHO88	YBR106W	ICP55	P40051	511 aa		4.14	□□□□□ -1.75
PHO88	YBR106W	YFL066C	P43538	392 aa		4.14	□□□□□ -1.75
PHO88	YBR106W	PRY1	P47032	299 aa		4.14	□□□□□ -1.75
PHO88	YBR106W	YBP2	P53169	641 aa		4.14	□□□□□ -1.75
PHO88	YBR106W	YHM2	Q04013	314 aa		4.14	□□□□□ -1.75
PHO88	YBR106W	LRS4	Q04087	347 aa	Known RBP	4.14	□□□□□ -1.75
PHO88	YBR106W	ECM16	Q04217	1267 aa	Known RBP	4.14	□□□□□ -1.75
PHO88	YBR106W	TMA64	Q04600	565 aa	Known RBP	4.14	□□□□□ -1.75
PHO88	YBR106W	YDR338C	Q05497	695 aa		4.14	□□□□□ -1.75
PHO88	YBR106W	XYL2	Q07993	356 aa		4.14	□□□□□ -1.75
PHO88	YBR106W	YPR027C	Q12079	277 aa		4.14	□□□□□ -1.75
PHO88	YBR106W	YPR053C	Q6Q5F3	151 aa		4.14	□□□□□ -1.75
PHO88	YBR106W	GAL1	P04385	528 aa		4.13	□□□□□ -1.75
PHO88	YBR106W	FBP1	P09201	348 aa		4.13	□□□□□ -1.75
PHO88	YBR106W	PHO81	P17442	1178 aa		4.13	□□□□□ -1.75
PHO88	YBR106W	KCC4	P25389	1037 aa		4.13	□□□□□ -1.75
PHO88	YBR106W	YCL002C	P25565	263 aa		4.13	□□□□□ -1.75
PHO88	YBR106W	YKU70	P32807	602 aa		4.13	□□□□□ -1.75
PHO88	YBR106W	PGM1	P33401	570 aa	Known RBP	4.13	□□□□□ -1.75
PHO88	YBR106W	SDS22	P36047	338 aa		4.13	□□□□□ -1.75
PHO88	YBR106W	TAF5	P38129	798 aa		4.13	□□□□□ -1.75
PHO88	YBR106W	PCL10	P53124	433 aa		4.13	□□□□□ -1.75
PHO88	YBR106W	TGL2	P54857	326 aa		4.13	□□□□□ -1.75
PHO88	YBR106W	YPL034W	Q03083	165 aa		4.13	□□□□□ -1.75
PHO88	YBR106W	YDR215C	Q12240	137 aa		4.13	□□□□□ -1.75
PHO88	YBR106W	NKP1	Q12493	238 aa		4.13	□□□□□ -1.75
PHO88	YBR106W	MPD2	Q99316	277 aa		4.13	□□□□□ -1.75
PHO88	YBR106W	PFK1	P16861	987 aa	Known RBP	4.12	□□□□□ -1.75
PHO88	YBR106W	MIP6	P38760	659 aa	Known RBP	4.12	□□□□□ -1.75
PHO88	YBR106W	CTF8	P38877	133 aa		4.12	□□□□□ -1.75
PHO88	YBR106W	SSP120	P39931	234 aa	Known RBP	4.12	□□□□□ -1.75
PHO88	YBR106W	VPS27	P40343	622 aa	Known RBP	4.12	□□□□□ -1.75
PHO88	YBR106W	FAF1	P40546	346 aa	Predicted RBP	4.12	□□□□□ -1.75
PHO88	YBR106W	YJR039W	P47107	1121 aa		4.12	□□□□□ -1.75
PHO88	YBR106W	MTR3	P48240	250 aa	Predicted RBP	4.12	□□□□□ -1.75
PHO88	YBR106W	UBC9	P50623	157 aa	Predicted RBP	4.12	□□□□□ -1.75
PHO88	YBR106W	DUS1	P53759	423 aa	Known RBP	4.12	□□□□□ -1.75
PHO88	YBR106W	CNM67	P53865	581 aa	Known RBP	4.12	□□□□□ -1.75
PHO88	YBR106W	CDA1	Q06702	301 aa		4.12	□□□□□ -1.75
PHO88	YBR106W	BUD21	Q08492	214 aa	Predicted RBP	4.12	□□□□□ -1.75
PHO88	YBR106W	YOR022C	Q12204	715 aa		4.12	□□□□□ -1.75
PHO88	YBR106W	SED4	P25365	1065 aa		4.11	□□□□□ -1.75
PHO88	YBR106W	SEC65	P29478	273 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 41.9 ms