RNA–Protein interactions for RNA: YBR087W

RFC5, Transcript of Subunit of heteropentameric Replication factor C (RF-C), yeast

Gene RFC5, Length 1,065 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFC5	YBR087W	SPC42	P36094	363 aa		4.62	□□□□□ -1.67
RFC5	YBR087W	CAF16	P43569	289 aa		4.62	□□□□□ -1.67
RFC5	YBR087W	HXT16	P47185	567 aa		4.62	□□□□□ -1.67
RFC5	YBR087W	KCS1	Q12494	1050 aa		4.62	□□□□□ -1.67
RFC5	YBR087W	YBR182C-A	Q8TGU6	64 aa		4.62	□□□□□ -1.67
RFC5	YBR087W	RAD18	P10862	487 aa		4.61	□□□□□ -1.67
RFC5	YBR087W	STE14	P32584	239 aa		4.61	□□□□□ -1.67
RFC5	YBR087W	LST4	P34239	828 aa		4.61	□□□□□ -1.67
RFC5	YBR087W	YHR078W	P38799	552 aa		4.61	□□□□□ -1.67
RFC5	YBR087W	CTF8	P38877	133 aa		4.61	□□□□□ -1.67
RFC5	YBR087W	RPN10	P38886	268 aa	Known RBP	4.61	□□□□□ -1.67
RFC5	YBR087W	DOS2	P54858	310 aa		4.61	□□□□□ -1.67
RFC5	YBR087W	DNM1	P54861	757 aa		4.61	□□□□□ -1.67
RFC5	YBR087W	CRR1	Q05790	422 aa		4.61	□□□□□ -1.67
RFC5	YBR087W	YGR161W-C	Q3E744	92 aa		4.61	□□□□□ -1.67
RFC5	YBR087W	RPL8A	P17076	256 aa	Known RBP	4.6	□□□□□ -1.67
RFC5	YBR087W	TRM2	P33753	639 aa		4.6	□□□□□ -1.67
RFC5	YBR087W	MCM6	P53091	1017 aa	Known RBP	4.6	□□□□□ -1.67
RFC5	YBR087W	SNP1	Q00916	300 aa	Predicted RBP	4.6	□□□□□ -1.67
RFC5	YBR087W	PUS9	Q12069	462 aa		4.6	□□□□□ -1.67
RFC5	YBR087W	TAD3	Q9URQ3	322 aa		4.6	□□□□□ -1.67
RFC5	YBR087W	ADR1	P07248	1323 aa		4.6	□□□□□ -1.67
RFC5	YBR087W	STE11	P23561	717 aa		4.59	□□□□□ -1.67
RFC5	YBR087W	CAD1	P24813	409 aa	Known RBP	4.59	□□□□□ -1.67
RFC5	YBR087W	SSY5	P47002	699 aa		4.59	□□□□□ -1.67
RFC5	YBR087W	YJR142W	P47173	342 aa		4.59	□□□□□ -1.67
RFC5	YBR087W	MNN10	P50108	393 aa	Known RBP	4.59	□□□□□ -1.67
RFC5	YBR087W	YNL193W	P53870	558 aa		4.59	□□□□□ -1.67
RFC5	YBR087W	THI21	Q08975	551 aa		4.59	□□□□□ -1.67
RFC5	YBR087W	SWM1	Q12379	170 aa		4.59	□□□□□ -1.67
RFC5	YBR087W	HOG1	P32485	435 aa		4.58	□□□□□ -1.68
RFC5	YBR087W	ZIP2	P53061	704 aa		4.58	□□□□□ -1.68
RFC5	YBR087W	NHX1	Q04121	633 aa		4.58	□□□□□ -1.68
RFC5	YBR087W	HCM1	P25364	564 aa		4.57	□□□□□ -1.68
RFC5	YBR087W	KAR4	P25583	335 aa		4.57	□□□□□ -1.68
RFC5	YBR087W	SEC21	P32074	935 aa	Known RBP	4.57	□□□□□ -1.68
RFC5	YBR087W	SAK1	P38990	1142 aa		4.57	□□□□□ -1.68
RFC5	YBR087W	MSS4	P38994	779 aa		4.57	□□□□□ -1.68
RFC5	YBR087W	PZF1	P39933	429 aa		4.57	□□□□□ -1.68
RFC5	YBR087W	YFL052W	P43551	465 aa		4.57	□□□□□ -1.68
RFC5	YBR087W	HLJ1	P48353	224 aa		4.57	□□□□□ -1.68
RFC5	YBR087W	MSE1	P48525	536 aa		4.57	□□□□□ -1.68
RFC5	YBR087W	EXG2	P52911	562 aa		4.57	□□□□□ -1.68
RFC5	YBR087W	YDR338C	Q05497	695 aa		4.57	□□□□□ -1.68
RFC5	YBR087W	PEX19	Q07418	342 aa		4.57	□□□□□ -1.68
RFC5	YBR087W	YLR001C	Q07895	862 aa		4.57	□□□□□ -1.68
RFC5	YBR087W	GUP2	Q08929	609 aa		4.57	□□□□□ -1.68
RFC5	YBR087W	SFL1	P20134	766 aa		4.56	□□□□□ -1.68
RFC5	YBR087W	PCL2	P25693	308 aa		4.56	□□□□□ -1.68
RFC5	YBR087W	YEL1	P34225	687 aa		4.56	□□□□□ -1.68
RFC5	YBR087W	DOT6	P40059	670 aa	Known RBP	4.56	□□□□□ -1.68
RFC5	YBR087W	VHR1	P40522	640 aa		4.56	□□□□□ -1.68
RFC5	YBR087W	MTR3	P48240	250 aa	Predicted RBP	4.56	□□□□□ -1.68
RFC5	YBR087W	NPY1	P53164	384 aa		4.56	□□□□□ -1.68
RFC5	YBR087W	SDA1	P53313	767 aa	Known RBP	4.56	□□□□□ -1.68
RFC5	YBR087W	TUB3	P09734	445 aa	Known RBP	4.55	□□□□□ -1.68
RFC5	YBR087W	HSL7	P38274	827 aa		4.55	□□□□□ -1.68
RFC5	YBR087W	AIM14	P53109	570 aa		4.55	□□□□□ -1.68
RFC5	YBR087W	SLI1	P53304	468 aa		4.55	□□□□□ -1.68
RFC5	YBR087W	ASI2	P53895	289 aa		4.55	□□□□□ -1.68
RFC5	YBR087W	PKH1	Q03407	766 aa		4.55	□□□□□ -1.68
RFC5	YBR087W	MUS81	Q04149	632 aa	Predicted RBP	4.55	□□□□□ -1.68
RFC5	YBR087W	COG8	Q04632	607 aa		4.55	□□□□□ -1.68
RFC5	YBR087W	PFK1	P16861	987 aa	Known RBP	4.54	□□□□□ -1.68
RFC5	YBR087W	NGG1	P32494	702 aa		4.54	□□□□□ -1.68
RFC5	YBR087W	PCM1	P38628	557 aa	Known RBP	4.54	□□□□□ -1.68
RFC5	YBR087W	CRP1	P38845	465 aa	Known RBP	4.54	□□□□□ -1.68
RFC5	YBR087W	UBC9	P50623	157 aa	Predicted RBP	4.54	□□□□□ -1.68
RFC5	YBR087W	MET13	P53128	600 aa		4.54	□□□□□ -1.68
RFC5	YBR087W	SUN4	P53616	420 aa		4.54	□□□□□ -1.68
RFC5	YBR087W	SLU7	Q02775	382 aa	Known RBP	4.54	□□□□□ -1.68
RFC5	YBR087W	ATG33	Q06485	197 aa		4.54	□□□□□ -1.68
RFC5	YBR087W	ENB1	Q08299	606 aa		4.54	□□□□□ -1.68
RFC5	YBR087W	GIN4	Q12263	1142 aa		4.54	□□□□□ -1.68
RFC5	YBR087W	Q0142	Q9ZZW4	58 aa		4.54	□□□□□ -1.68
RFC5	YBR087W	HMG1	P12683	1054 aa		4.53	□□□□□ -1.68
RFC5	YBR087W	PRP4	P20053	465 aa	Known RBP	4.53	□□□□□ -1.68
RFC5	YBR087W	MIH1	P23748	554 aa		4.53	□□□□□ -1.68
RFC5	YBR087W	DCG1	P32460	244 aa		4.53	□□□□□ -1.68
RFC5	YBR087W	YKR051W	P36142	418 aa		4.53	□□□□□ -1.68
RFC5	YBR087W	PFA3	P42836	336 aa		4.53	□□□□□ -1.68
RFC5	YBR087W	BNA2	P47125	453 aa		4.53	□□□□□ -1.68
RFC5	YBR087W	PHO23	P50947	330 aa		4.53	□□□□□ -1.68
RFC5	YBR087W	RPN7	Q06103	429 aa	Known RBP	4.53	□□□□□ -1.68
RFC5	YBR087W	GUD1	Q07729	489 aa		4.53	□□□□□ -1.68
RFC5	YBR087W	NTO1	Q12311	748 aa		4.53	□□□□□ -1.68
RFC5	YBR087W	TRM11	Q12463	433 aa		4.53	□□□□□ -1.68
RFC5	YBR087W	YLR149C	Q99296	730 aa		4.53	□□□□□ -1.68
RFC5	YBR087W	PMA1	P05030	918 aa	Known RBP	4.52	□□□□□ -1.69
RFC5	YBR087W	MGS1	P40151	587 aa		4.52	□□□□□ -1.69
RFC5	YBR087W	YNR029C	P53729	429 aa	Known RBP	4.52	□□□□□ -1.69
RFC5	YBR087W	ASM4	Q05166	528 aa		4.52	□□□□□ -1.69
RFC5	YBR087W	THI73	Q07904	523 aa		4.52	□□□□□ -1.69
RFC5	YBR087W	LAS17	Q12446	633 aa		4.52	□□□□□ -1.69
RFC5	YBR087W	YLR415C	O13578	112 aa		4.51	□□□□□ -1.69
RFC5	YBR087W	PMI40	P29952	429 aa	Known RBP	4.51	□□□□□ -1.69
RFC5	YBR087W	CTF13	P35203	478 aa		4.51	□□□□□ -1.69
RFC5	YBR087W	RPP1	P38786	293 aa		4.51	□□□□□ -1.69
RFC5	YBR087W	AIM21	P40563	679 aa		4.51	□□□□□ -1.69
RFC5	YBR087W	NUP145	P49687	1317 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms