RNA–Protein interactions for RNA: ENST00000639489.1

KCNMA1-262, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,302 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-262ENST00000639489 CNNM3Q8NE01 707 aa17.29■□□□□ 0.36
KCNMA1-262ENST00000639489 NLRP3Q96P20 1036 aa17.29■□□□□ 0.36
KCNMA1-262ENST00000639489 SETDB2Q96T68 719 aa17.29■□□□□ 0.36
KCNMA1-262ENST00000639489 ZNF165P49910 485 aa17.28■□□□□ 0.36
KCNMA1-262ENST00000639489 CCDC96Q2M329 555 aa17.28■□□□□ 0.36
KCNMA1-262ENST00000639489 ODF2Q5BJF6 829 aa17.28■□□□□ 0.36
KCNMA1-262ENST00000639489 DDX19AQ9NUU7 478 aaKnown RBP17.28■□□□□ 0.36
KCNMA1-262ENST00000639489 CCP110O43303 1012 aa17.28■□□□□ 0.36
KCNMA1-262ENST00000639489 TMEM132AQ24JP5 1023 aa17.28■□□□□ 0.36
KCNMA1-262ENST00000639489 ZNF496Q96IT1 587 aaPredicted RBP17.28■□□□□ 0.36
KCNMA1-262ENST00000639489 CCDC194A0A1B0GVG4 234 aa17.28■□□□□ 0.36
KCNMA1-262ENST00000639489 SFPQP23246 707 aaKnown RBP eCLIP17.28■□□□□ 0.36
KCNMA1-262ENST00000639489 UGGT1Q9NYU2 1555 aa17.28■□□□□ 0.36
KCNMA1-262ENST00000639489 DTNBO60941 627 aa17.28■□□□□ 0.36
KCNMA1-262ENST00000639489 NOM1Q5C9Z4 860 aaKnown RBP17.28■□□□□ 0.36
KCNMA1-262ENST00000639489 TEX35Q5T0J7 233 aa17.28■□□□□ 0.36
KCNMA1-262ENST00000639489 DNM1Q05193 864 aaKnown RBP17.27■□□□□ 0.36
KCNMA1-262ENST00000639489 BLMP54132 1417 aaPredicted RBP17.27■□□□□ 0.36
KCNMA1-262ENST00000639489 GCC2Q8IWJ2 1684 aa17.27■□□□□ 0.35
KCNMA1-262ENST00000639489 EIF5P55010 431 aaKnown RBP17.27■□□□□ 0.35
KCNMA1-262ENST00000639489 ZSCAN23Q3MJ62 389 aa17.27■□□□□ 0.35
KCNMA1-262ENST00000639489 KCNQ3O43525 872 aa17.26■□□□□ 0.35
KCNMA1-262ENST00000639489 SLC4A4Q9Y6R1 1079 aa17.26■□□□□ 0.35
KCNMA1-262ENST00000639489 ABCA8O94911 1581 aa17.26■□□□□ 0.35
KCNMA1-262ENST00000639489 ZBTB43O43298 467 aa17.26■□□□□ 0.35
KCNMA1-262ENST00000639489 CREB3L3Q68CJ9 461 aa17.26■□□□□ 0.35
KCNMA1-262ENST00000639489 IL17REQ8NFR9 667 aa17.26■□□□□ 0.35
KCNMA1-262ENST00000639489 USP48Q86UV5 1035 aa17.26■□□□□ 0.35
KCNMA1-262ENST00000639489 UQCRHLA0A096LP55 91 aa17.25■□□□□ 0.35
KCNMA1-262ENST00000639489 UQCRHP07919 91 aa17.25■□□□□ 0.35
KCNMA1-262ENST00000639489 METP08581 1390 aa17.25■□□□□ 0.35
KCNMA1-262ENST00000639489 SBNO2Q9Y2G9 1366 aa17.25■□□□□ 0.35
KCNMA1-262ENST00000639489 WTAPQ15007 396 aa17.25■□□□□ 0.35
KCNMA1-262ENST00000639489 DBNDD2Q9BQY9 259 aa17.25■□□□□ 0.35
KCNMA1-262ENST00000639489 NDUFB9Q9Y6M9 179 aa17.25■□□□□ 0.35
KCNMA1-262ENST00000639489 ARHGEF5Q12774 1597 aa17.25■□□□□ 0.35
KCNMA1-262ENST00000639489 BAG3O95817 575 aa17.25■□□□□ 0.35
KCNMA1-262ENST00000639489 LDHCP07864 332 aa17.25■□□□□ 0.35
KCNMA1-262ENST00000639489 PDE4BQ07343 736 aa17.25■□□□□ 0.35
KCNMA1-262ENST00000639489 ZNF622Q969S3 477 aaKnown RBP eCLIP17.25■□□□□ 0.35
KCNMA1-262ENST00000639489 UTP14AQ9BVJ6 771 aaKnown RBP17.25■□□□□ 0.35
KCNMA1-262ENST00000639489 MIGA1Q8NAN2 632 aa17.25■□□□□ 0.35
KCNMA1-262ENST00000639489 NEO1Q92859 1461 aa17.24■□□□□ 0.35
KCNMA1-262ENST00000639489 CLIP2Q9UDT6 1046 aa17.24■□□□□ 0.35
KCNMA1-262ENST00000639489 PCDH11XQ9BZA7 1347 aa17.24■□□□□ 0.35
KCNMA1-262ENST00000639489 PCDH11YQ9BZA8 1340 aa17.24■□□□□ 0.35
KCNMA1-262ENST00000639489 ZNF594Q96JF6 807 aaPredicted RBP17.24■□□□□ 0.35
KCNMA1-262ENST00000639489 JAG2Q9Y219 1238 aa17.24■□□□□ 0.35
KCNMA1-262ENST00000639489 CTAGE5O15320 804 aa17.23■□□□□ 0.35
KCNMA1-262ENST00000639489 ADCY5O95622 1261 aa17.23■□□□□ 0.35
KCNMA1-262ENST00000639489 SAMD9LQ8IVG5 1584 aa17.23■□□□□ 0.35
KCNMA1-262ENST00000639489 F8W031 263 aaPredicted RBP17.23■□□□□ 0.35
KCNMA1-262ENST00000639489 PRC1O43663 620 aa17.23■□□□□ 0.35
KCNMA1-262ENST00000639489 EIF4A1P60842 406 aaKnown RBP17.23■□□□□ 0.35
KCNMA1-262ENST00000639489 ALG1Q9BT22 464 aa17.23■□□□□ 0.35
KCNMA1-262ENST00000639489 METTL22Q9BUU2 404 aaPredicted RBP17.23■□□□□ 0.35
KCNMA1-262ENST00000639489 NAA16Q6N069 864 aaPredicted RBP17.23■□□□□ 0.35
KCNMA1-262ENST00000639489 SMARCC1Q92922 1105 aaPredicted RBP17.23■□□□□ 0.35
KCNMA1-262ENST00000639489 PDCL3Q9H2J4 239 aa17.23■□□□□ 0.35
KCNMA1-262ENST00000639489 KAT14Q9H8E8 782 aa17.23■□□□□ 0.35
KCNMA1-262ENST00000639489 SLC52A2Q9HAB3 445 aa17.23■□□□□ 0.35
KCNMA1-262ENST00000639489 DACT1Q9NYF0 836 aa17.23■□□□□ 0.35
KCNMA1-262ENST00000639489 HOXB7P09629 217 aa17.22■□□□□ 0.35
KCNMA1-262ENST00000639489 APOBRQ0VD83 1088 aa17.22■□□□□ 0.35
KCNMA1-262ENST00000639489 SYCP1Q15431 976 aa17.22■□□□□ 0.35
KCNMA1-262ENST00000639489 CCDC129Q6ZRS4 1044 aa17.22■□□□□ 0.35
KCNMA1-262ENST00000639489 CPLX3Q8WVH0 158 aa17.22■□□□□ 0.35
KCNMA1-262ENST00000639489 ACBD3Q9H3P7 528 aa17.22■□□□□ 0.35
KCNMA1-262ENST00000639489 ZSCAN16Q9H4T2 348 aaPredicted RBP17.22■□□□□ 0.35
KCNMA1-262ENST00000639489 A0A1B0GUL7 405 aa17.22■□□□□ 0.35
KCNMA1-262ENST00000639489 F13A1P00488 732 aa17.22■□□□□ 0.35
KCNMA1-262ENST00000639489 XRCC6P12956 609 aaKnown RBP eCLIP17.22■□□□□ 0.35
KCNMA1-262ENST00000639489 SKIDA1Q1XH10 827 aa17.22■□□□□ 0.35
KCNMA1-262ENST00000639489 ARHGAP29Q52LW3 1261 aa17.22■□□□□ 0.35
KCNMA1-262ENST00000639489 TRMT1LQ7Z2T5 733 aaKnown RBP17.22■□□□□ 0.35
KCNMA1-262ENST00000639489 SUCLG2Q96I99 432 aa17.22■□□□□ 0.35
KCNMA1-262ENST00000639489 CRNKL1Q9BZJ0 848 aaKnown RBP17.22■□□□□ 0.35
KCNMA1-262ENST00000639489 TRMT1Q9NXH9 659 aaKnown RBP17.22■□□□□ 0.35
KCNMA1-262ENST00000639489 NSFL1CQ9UNZ2 370 aaKnown RBP17.22■□□□□ 0.35
KCNMA1-262ENST00000639489 EPB41L2O43491 1005 aaKnown RBP17.22■□□□□ 0.35
KCNMA1-262ENST00000639489 CCDC171Q6TFL3 1326 aa17.21■□□□□ 0.35
KCNMA1-262ENST00000639489 RNF113AO15541 343 aaKnown RBP17.21■□□□□ 0.35
KCNMA1-262ENST00000639489 BABAM1Q9NWV8 329 aa17.21■□□□□ 0.35
KCNMA1-262ENST00000639489 RXRAP19793 462 aa17.21■□□□□ 0.35
KCNMA1-262ENST00000639489 RAB3GAP1Q15042 981 aa17.21■□□□□ 0.35
KCNMA1-262ENST00000639489 SLF2Q8IX21 1173 aa17.21■□□□□ 0.35
KCNMA1-262ENST00000639489 PLBD2Q8NHP8 589 aa17.21■□□□□ 0.35
KCNMA1-262ENST00000639489 ESR2Q92731 530 aa17.21■□□□□ 0.35
KCNMA1-262ENST00000639489 MAP7D2Q96T17 732 aa17.21■□□□□ 0.35
KCNMA1-262ENST00000639489 ERVK-7P63135 1459 aa17.21■□□□□ 0.35
KCNMA1-262ENST00000639489 KIF5BP33176 963 aa17.21■□□□□ 0.35
KCNMA1-262ENST00000639489 MTERF4Q7Z6M4 381 aaKnown RBP17.21■□□□□ 0.35
KCNMA1-262ENST00000639489 DNAJC10Q8IXB1 793 aa17.21■□□□□ 0.35
KCNMA1-262ENST00000639489 FAM227BQ96M60 508 aa17.21■□□□□ 0.35
KCNMA1-262ENST00000639489 TOP1P11387 765 aaKnown RBP17.2■□□□□ 0.34
KCNMA1-262ENST00000639489 MARCKSP29966 332 aaPredicted RBP17.2■□□□□ 0.34
KCNMA1-262ENST00000639489 RBM25P49756 843 aaKnown RBP17.2■□□□□ 0.34
KCNMA1-262ENST00000639489 EYA2O00167 538 aa17.2■□□□□ 0.34
KCNMA1-262ENST00000639489 IDEP14735 1019 aa17.2■□□□□ 0.34
KCNMA1-262ENST00000639489 USP44Q9H0E7 712 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms