RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 CHAF1AQ13111 956 aaPredicted RBP14.7□□□□□ -0.06
LITAF-221ENST00000622633 SYAP1Q96A49 352 aaPredicted RBP14.7□□□□□ -0.06
LITAF-221ENST00000622633 TTC41PQ6P2S7 1318 aa14.69□□□□□ -0.06
LITAF-221ENST00000622633 CASTP20810 708 aaKnown RBP14.69□□□□□ -0.06
LITAF-221ENST00000622633 MAP2K1Q02750 393 aaPredicted RBP14.69□□□□□ -0.06
LITAF-221ENST00000622633 SGSM3Q96HU1 749 aa14.69□□□□□ -0.06
LITAF-221ENST00000622633 CNPY2Q9Y2B0 182 aa14.69□□□□□ -0.06
LITAF-221ENST00000622633 GIGYF1O75420 1035 aaPredicted RBP14.69□□□□□ -0.06
LITAF-221ENST00000622633 MTX1Q13505 466 aa14.69□□□□□ -0.06
LITAF-221ENST00000622633 C1orf141Q5JVX7 400 aa14.69□□□□□ -0.06
LITAF-221ENST00000622633 KCNH5Q8NCM2 988 aa14.69□□□□□ -0.06
LITAF-221ENST00000622633 ECHDC1Q9NTX5 307 aa14.69□□□□□ -0.06
LITAF-221ENST00000622633 IFIT2P09913 472 aaKnown RBP14.68□□□□□ -0.06
LITAF-221ENST00000622633 ZSCAN22P10073 491 aaPredicted RBP14.68□□□□□ -0.06
LITAF-221ENST00000622633 SYT1P21579 422 aa14.68□□□□□ -0.06
LITAF-221ENST00000622633 KSR2Q6VAB6 950 aa14.68□□□□□ -0.06
LITAF-221ENST00000622633 C10orf67Q8IYJ2 551 aa14.68□□□□□ -0.06
LITAF-221ENST00000622633 DDX54Q8TDD1 881 aaKnown RBP14.68□□□□□ -0.06
LITAF-221ENST00000622633 NFAT5O94916 1531 aa14.68□□□□□ -0.06
LITAF-221ENST00000622633 MYO1CO00159 1063 aa14.68□□□□□ -0.06
LITAF-221ENST00000622633 LARGE1O95461 756 aa14.68□□□□□ -0.06
LITAF-221ENST00000622633 NAA30Q147X3 362 aaPredicted RBP14.68□□□□□ -0.06
LITAF-221ENST00000622633 PRPF40BQ6NWY9 871 aaKnown RBP14.68□□□□□ -0.06
LITAF-221ENST00000622633 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.68□□□□□ -0.06
LITAF-221ENST00000622633 SMC3Q9UQE7 1217 aa14.68□□□□□ -0.06
LITAF-221ENST00000622633 LTN1O94822 1766 aa14.68□□□□□ -0.06
LITAF-221ENST00000622633 MED1Q15648 1581 aaPredicted RBP14.68□□□□□ -0.06
LITAF-221ENST00000622633 CCDC189A1A4V9 331 aa14.67□□□□□ -0.06
LITAF-221ENST00000622633 STX6O43752 255 aa14.67□□□□□ -0.06
LITAF-221ENST00000622633 ALDH1L1O75891 902 aa14.67□□□□□ -0.06
LITAF-221ENST00000622633 ADCK5Q3MIX3 580 aa14.67□□□□□ -0.06
LITAF-221ENST00000622633 AMOTQ4VCS5 1084 aa14.67□□□□□ -0.06
LITAF-221ENST00000622633 LMOD2Q6P5Q4 547 aa14.67□□□□□ -0.06
LITAF-221ENST00000622633 SYT10Q6XYQ8 523 aa14.67□□□□□ -0.06
LITAF-221ENST00000622633 AACSQ86V21 672 aa14.67□□□□□ -0.06
LITAF-221ENST00000622633 RUFY2Q8WXA3 655 aa14.67□□□□□ -0.06
LITAF-221ENST00000622633 JAKMIP1Q96N16 626 aaKnown RBP14.67□□□□□ -0.06
LITAF-221ENST00000622633 RAI14Q9P0K7 980 aa14.67□□□□□ -0.06
LITAF-221ENST00000622633 USP54Q70EL1 1684 aa14.67□□□□□ -0.06
LITAF-221ENST00000622633 GCP02774 474 aa14.67□□□□□ -0.06
LITAF-221ENST00000622633 AIMP1Q12904 312 aaKnown RBP14.67□□□□□ -0.06
LITAF-221ENST00000622633 MUM1L1Q5H9M0 696 aa14.67□□□□□ -0.06
LITAF-221ENST00000622633 HYPKQ9NX55 129 aa14.67□□□□□ -0.06
LITAF-221ENST00000622633 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.67□□□□□ -0.06
LITAF-221ENST00000622633 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.67□□□□□ -0.06
LITAF-221ENST00000622633 CCDC83Q8IWF9 413 aa14.66□□□□□ -0.06
LITAF-221ENST00000622633 ATG3Q9NT62 314 aa14.66□□□□□ -0.06
LITAF-221ENST00000622633 PDRG1Q9NUG6 133 aa14.66□□□□□ -0.06
LITAF-221ENST00000622633 JRKLQ9Y4A0 524 aa14.66□□□□□ -0.06
LITAF-221ENST00000622633 GPATCH3Q96I76 525 aa14.66□□□□□ -0.06
LITAF-221ENST00000622633 SUCLG2Q96I99 432 aa14.66□□□□□ -0.06
LITAF-221ENST00000622633 CXorf56Q9H5V9 222 aa14.66□□□□□ -0.06
LITAF-221ENST00000622633 LCMT1Q9UIC8 334 aa14.66□□□□□ -0.06
LITAF-221ENST00000622633 ARHGEF25Q86VW2 580 aa14.65□□□□□ -0.06
LITAF-221ENST00000622633 TMEM87AQ8NBN3 555 aa14.65□□□□□ -0.06
LITAF-221ENST00000622633 ANKRD24Q8TF21 1146 aa14.65□□□□□ -0.06
LITAF-221ENST00000622633 DRC1Q96MC2 740 aa14.65□□□□□ -0.06
LITAF-221ENST00000622633 ORAI2Q96SN7 254 aa14.65□□□□□ -0.06
LITAF-221ENST00000622633 CCDC8Q9H0W5 538 aaPredicted RBP14.65□□□□□ -0.06
LITAF-221ENST00000622633 PXDNQ92626 1479 aa14.65□□□□□ -0.06
LITAF-221ENST00000622633 ANKLE2Q86XL3 938 aa14.65□□□□□ -0.06
LITAF-221ENST00000622633 ERC1Q8IUD2 1116 aa14.65□□□□□ -0.06
LITAF-221ENST00000622633 KIAA1524Q8TCG1 905 aa14.65□□□□□ -0.06
LITAF-221ENST00000622633 KAZALD1Q96I82 304 aa14.65□□□□□ -0.06
LITAF-221ENST00000622633 SUFUQ9UMX1 484 aa14.65□□□□□ -0.06
LITAF-221ENST00000622633 FER1L4A9Z1Z3 1794 aa14.64□□□□□ -0.07
LITAF-221ENST00000622633 KDM3BQ7LBC6 1761 aa14.64□□□□□ -0.07
LITAF-221ENST00000622633 F13A1P00488 732 aa14.64□□□□□ -0.07
LITAF-221ENST00000622633 SART3Q15020 963 aaKnown RBP14.64□□□□□ -0.07
LITAF-221ENST00000622633 ZNF592Q92610 1267 aa14.64□□□□□ -0.07
LITAF-221ENST00000622633 EVI5LQ96CN4 794 aa14.64□□□□□ -0.07
LITAF-221ENST00000622633 FAM227BQ96M60 508 aa14.64□□□□□ -0.07
LITAF-221ENST00000622633 NOL10Q9BSC4 688 aaKnown RBP14.64□□□□□ -0.07
LITAF-221ENST00000622633 BICC1Q9H694 974 aaKnown RBP14.64□□□□□ -0.07
LITAF-221ENST00000622633 RGPD2P0DJD1 1756 aa14.64□□□□□ -0.07
LITAF-221ENST00000622633 GRM8O00222 908 aa14.64□□□□□ -0.07
LITAF-221ENST00000622633 FIBPO43427 364 aa14.64□□□□□ -0.07
LITAF-221ENST00000622633 KIF1CO43896 1103 aaKnown RBP14.64□□□□□ -0.07
LITAF-221ENST00000622633 SASH1O94885 1247 aa14.64□□□□□ -0.07
LITAF-221ENST00000622633 GJB2P29033 226 aa14.64□□□□□ -0.07
LITAF-221ENST00000622633 RBM6P78332 1123 aaKnown RBP14.64□□□□□ -0.07
LITAF-221ENST00000622633 EAF2Q96CJ1 260 aaPredicted RBP14.64□□□□□ -0.07
LITAF-221ENST00000622633 ZSWIM6Q9HCJ5 1215 aa14.64□□□□□ -0.07
LITAF-221ENST00000622633 CYP46A1Q9Y6A2 500 aa14.64□□□□□ -0.07
LITAF-221ENST00000622633 G3BP1Q13283 466 aaKnown RBP eCLIP14.63□□□□□ -0.07
LITAF-221ENST00000622633 NECTIN1Q15223 517 aa14.63□□□□□ -0.07
LITAF-221ENST00000622633 CCDC183Q5T5S1 534 aa14.63□□□□□ -0.07
LITAF-221ENST00000622633 VPS53Q5VIR6 699 aa14.63□□□□□ -0.07
LITAF-221ENST00000622633 LINS1Q8NG48 757 aa14.63□□□□□ -0.07
LITAF-221ENST00000622633 MED4Q9NPJ6 270 aa14.63□□□□□ -0.07
LITAF-221ENST00000622633 AXIN2Q9Y2T1 843 aa14.63□□□□□ -0.07
LITAF-221ENST00000622633 GOLGA6L6A8MZA4 724 aa14.63□□□□□ -0.07
LITAF-221ENST00000622633 TNNT1P13805 278 aa14.63□□□□□ -0.07
LITAF-221ENST00000622633 TDO2P48775 406 aa14.63□□□□□ -0.07
LITAF-221ENST00000622633 KMT5BQ4FZB7 885 aa14.63□□□□□ -0.07
LITAF-221ENST00000622633 NECAB1Q8N987 351 aa14.63□□□□□ -0.07
LITAF-221ENST00000622633 SIL1Q9H173 461 aa14.63□□□□□ -0.07
LITAF-221ENST00000622633 TLR7Q9NYK1 1049 aaKnown RBP14.63□□□□□ -0.07
LITAF-221ENST00000622633 RBM8AQ9Y5S9 174 aaKnown RBP14.63□□□□□ -0.07
LITAF-221ENST00000622633 CLSTN1O94985 981 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms