RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 CNKSR2Q8WXI2 1034 aa9.85□□□□□ -0.83
TPM4-210ENST00000588507 C1QTNF1Q9BXJ1 281 aa9.85□□□□□ -0.83
TPM4-210ENST00000588507 VPS33BQ9H267 617 aa9.85□□□□□ -0.83
TPM4-210ENST00000588507 SLC12A5Q9H2X9 1139 aa9.85□□□□□ -0.83
TPM4-210ENST00000588507 PTCH2Q9Y6C5 1203 aa9.85□□□□□ -0.83
TPM4-210ENST00000588507 EIF5P55010 431 aaKnown RBP9.84□□□□□ -0.83
TPM4-210ENST00000588507 ARHGEF6Q15052 776 aa9.84□□□□□ -0.83
TPM4-210ENST00000588507 AOC3Q16853 763 aa9.84□□□□□ -0.83
TPM4-210ENST00000588507 TDHQ8IZJ6 230 aa9.84□□□□□ -0.83
TPM4-210ENST00000588507 FAM161BQ96MY7 647 aa9.84□□□□□ -0.83
TPM4-210ENST00000588507 FLT4P35916 1363 aa9.84□□□□□ -0.83
TPM4-210ENST00000588507 NCOR1O75376 2440 aa9.84□□□□□ -0.83
TPM4-210ENST00000588507 MUC6Q6W4X9 2439 aa9.83□□□□□ -0.84
TPM4-210ENST00000588507 UBE2Q2LH0YL09 131 aa9.83□□□□□ -0.84
TPM4-210ENST00000588507 TBC1D10BQ4KMP7 808 aaPredicted RBP9.83□□□□□ -0.84
TPM4-210ENST00000588507 NBPF5PQ86XG9 351 aaPredicted RBP9.83□□□□□ -0.84
TPM4-210ENST00000588507 RAD17O75943 681 aa9.82□□□□□ -0.84
TPM4-210ENST00000588507 INHBEP58166 350 aa9.82□□□□□ -0.84
TPM4-210ENST00000588507 SP3Q02447 781 aa9.82□□□□□ -0.84
TPM4-210ENST00000588507 MOB2Q70IA6 237 aa9.82□□□□□ -0.84
TPM4-210ENST00000588507 SH3TC2Q8TF17 1288 aa9.82□□□□□ -0.84
TPM4-210ENST00000588507 TBC1D2BQ9UPU7 963 aa9.82□□□□□ -0.84
TPM4-210ENST00000588507 KIF24Q5T7B8 1368 aa9.82□□□□□ -0.84
TPM4-210ENST00000588507 CACNA1GO43497 2377 aa9.81□□□□□ -0.84
TPM4-210ENST00000588507 RBM26Q5T8P6 1007 aaKnown RBP9.81□□□□□ -0.84
TPM4-210ENST00000588507 IFNL1Q8IU54 200 aa9.81□□□□□ -0.84
TPM4-210ENST00000588507 DPF2Q92785 391 aa9.81□□□□□ -0.84
TPM4-210ENST00000588507 EYA1Q99502 592 aa9.81□□□□□ -0.84
TPM4-210ENST00000588507 CDX2Q99626 313 aaPredicted RBP9.81□□□□□ -0.84
TPM4-210ENST00000588507 ST20-MTHFSA0A0A6YYL1 179 aa9.8□□□□□ -0.84
TPM4-210ENST00000588507 PRAMEF22A3QJZ6 481 aa9.8□□□□□ -0.84
TPM4-210ENST00000588507 GJA8P48165 433 aa9.8□□□□□ -0.84
TPM4-210ENST00000588507 MTHFSP49914 203 aa9.8□□□□□ -0.84
TPM4-210ENST00000588507 MRE11P49959 708 aa9.8□□□□□ -0.84
TPM4-210ENST00000588507 CAP1Q01518 475 aa9.8□□□□□ -0.84
TPM4-210ENST00000588507 TCIRG1Q13488 830 aa9.8□□□□□ -0.84
TPM4-210ENST00000588507 KDM3BQ7LBC6 1761 aa9.8□□□□□ -0.84
TPM4-210ENST00000588507 FARP2O94887 1054 aaPredicted RBP9.79□□□□□ -0.84
TPM4-210ENST00000588507 EGFRP00533 1210 aa9.79□□□□□ -0.84
TPM4-210ENST00000588507 ZNF697Q5TEC3 545 aa9.79□□□□□ -0.84
TPM4-210ENST00000588507 TPTE2Q6XPS3 522 aa9.79□□□□□ -0.84
TPM4-210ENST00000588507 GGA3Q9NZ52 723 aa9.79□□□□□ -0.84
TPM4-210ENST00000588507 LAMA2P24043 3122 aaKnown RBP9.79□□□□□ -0.84
TPM4-210ENST00000588507 MANSC4A6NHS7 340 aaPredicted RBP9.78□□□□□ -0.84
TPM4-210ENST00000588507 MTFR1Q15390 333 aa9.78□□□□□ -0.84
TPM4-210ENST00000588507 ZNF330Q9Y3S2 320 aaPredicted RBP9.78□□□□□ -0.84
TPM4-210ENST00000588507 SCN7AQ01118 1682 aa9.77□□□□□ -0.84
TPM4-210ENST00000588507 PKD1L2Q7Z442 2459 aa9.77□□□□□ -0.85
TPM4-210ENST00000588507 STARD3NLO95772 234 aa9.77□□□□□ -0.85
TPM4-210ENST00000588507 GJB1P08034 283 aa9.77□□□□□ -0.85
TPM4-210ENST00000588507 FOXK2Q01167 660 aa9.77□□□□□ -0.85
TPM4-210ENST00000588507 TTLL12Q14166 644 aaPredicted RBP9.77□□□□□ -0.85
TPM4-210ENST00000588507 PLEKHO1Q53GL0 409 aaPredicted RBP9.77□□□□□ -0.85
TPM4-210ENST00000588507 SPRYD7Q5W111 196 aa9.77□□□□□ -0.85
TPM4-210ENST00000588507 ZNF530Q6P9A1 599 aaPredicted RBP9.77□□□□□ -0.85
TPM4-210ENST00000588507 SUPT20HQ8NEM7 779 aa9.77□□□□□ -0.85
TPM4-210ENST00000588507 LRFN3Q9BTN0 628 aa9.77□□□□□ -0.85
TPM4-210ENST00000588507 UBE2OQ9C0C9 1292 aaKnown RBP9.77□□□□□ -0.85
TPM4-210ENST00000588507 TMX4Q9H1E5 349 aaPredicted RBP9.77□□□□□ -0.85
TPM4-210ENST00000588507 BDP1A6H8Y1 2624 aa9.76□□□□□ -0.85
TPM4-210ENST00000588507 CAMTA2O94983 1202 aa9.76□□□□□ -0.85
TPM4-210ENST00000588507 CRHR2Q13324 411 aa9.76□□□□□ -0.85
TPM4-210ENST00000588507 KIF4BQ2VIQ3 1234 aa9.76□□□□□ -0.85
TPM4-210ENST00000588507 OTUD7BQ6GQQ9 843 aa9.76□□□□□ -0.85
TPM4-210ENST00000588507 NPM2Q86SE8 214 aaKnown RBP9.76□□□□□ -0.85
TPM4-210ENST00000588507 VSIG10Q8N0Z9 540 aa9.76□□□□□ -0.85
TPM4-210ENST00000588507 RAB3GAP2Q9H2M9 1393 aa9.75□□□□□ -0.85
TPM4-210ENST00000588507 IGF2BP3O00425 579 aaKnown RBP eCLIP9.75□□□□□ -0.85
TPM4-210ENST00000588507 TCERG1O14776 1098 aaKnown RBP9.75□□□□□ -0.85
TPM4-210ENST00000588507 ECM2O94769 699 aaPredicted RBP9.75□□□□□ -0.85
TPM4-210ENST00000588507 MAGEA10P43363 369 aaPredicted RBP9.75□□□□□ -0.85
TPM4-210ENST00000588507 PPARGC1BQ86YN6 1023 aaKnown RBP9.75□□□□□ -0.85
TPM4-210ENST00000588507 ADAMTS19Q8TE59 1207 aa9.75□□□□□ -0.85
TPM4-210ENST00000588507 UHRF1Q96T88 793 aaPredicted RBP9.75□□□□□ -0.85
TPM4-210ENST00000588507 ZMYND8Q9ULU4 1186 aaPredicted RBP9.75□□□□□ -0.85
TPM4-210ENST00000588507 ZNF646O15015 1829 aaPredicted RBP9.75□□□□□ -0.85
TPM4-210ENST00000588507 KIAA2012Q0VF49 1180 aa9.74□□□□□ -0.85
TPM4-210ENST00000588507 CRY2Q49AN0 593 aa9.74□□□□□ -0.85
TPM4-210ENST00000588507 C1orf141Q5JVX7 400 aa9.74□□□□□ -0.85
TPM4-210ENST00000588507 MYLIPQ8WY64 445 aa9.74□□□□□ -0.85
TPM4-210ENST00000588507 GGNBP2Q9H3C7 697 aa9.74□□□□□ -0.85
TPM4-210ENST00000588507 PRUNE2Q8WUY3 3088 aa9.74□□□□□ -0.85
TPM4-210ENST00000588507 ASTN2O75129 1339 aaPredicted RBP9.74□□□□□ -0.85
TPM4-210ENST00000588507 YDJCA8MPS7 323 aa9.73□□□□□ -0.85
TPM4-210ENST00000588507 FOSL2P15408 326 aa9.73□□□□□ -0.85
TPM4-210ENST00000588507 RPS12P25398 132 aaKnown RBP9.73□□□□□ -0.85
TPM4-210ENST00000588507 GTF2E1P29083 439 aaPredicted RBP9.73□□□□□ -0.85
TPM4-210ENST00000588507 IL6STP40189 918 aaPredicted RBP9.73□□□□□ -0.85
TPM4-210ENST00000588507 PTPN12Q05209 780 aaKnown RBP9.73□□□□□ -0.85
TPM4-210ENST00000588507 SLC39A6Q13433 755 aa9.73□□□□□ -0.85
TPM4-210ENST00000588507 AMOTQ4VCS5 1084 aa9.73□□□□□ -0.85
TPM4-210ENST00000588507 ANGEL2Q5VTE6 544 aaKnown RBP9.73□□□□□ -0.85
TPM4-210ENST00000588507 RPGRQ92834 1020 aaKnown RBP9.73□□□□□ -0.85
TPM4-210ENST00000588507 RTFDC1Q9BY42 306 aaPredicted RBP9.73□□□□□ -0.85
TPM4-210ENST00000588507 SEMA6BQ9H3T3 888 aa9.73□□□□□ -0.85
TPM4-210ENST00000588507 EMILIN1Q9Y6C2 1016 aa9.73□□□□□ -0.85
TPM4-210ENST00000588507 PSMD14O00487 310 aa9.72□□□□□ -0.85
TPM4-210ENST00000588507 FYB1O15117 783 aa9.72□□□□□ -0.85
TPM4-210ENST00000588507 PPM1GO15355 546 aaPredicted RBP9.72□□□□□ -0.85
TPM4-210ENST00000588507 CCL5P13501 91 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms