RNA–Protein interactions for RNA: ENST00000579324.5

NUP85-211, Transcript of nucleoporin 85, humanhuman

TSL 2 BASIC

Gene NUP85, Length 2,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-211ENST00000579324 JARID2Q92833 1246 aaPredicted RBP13.18□□□□□ -0.3
NUP85-211ENST00000579324 BRD1O95696 1058 aa13.17□□□□□ -0.3
NUP85-211ENST00000579324 A1BGP04217 495 aa13.17□□□□□ -0.3
NUP85-211ENST00000579324 TNNI3KQ59H18 835 aa13.17□□□□□ -0.3
NUP85-211ENST00000579324 TM6SF1Q9BZW5 370 aa13.17□□□□□ -0.3
NUP85-211ENST00000579324 LMBRD1Q9NUN5 540 aa13.17□□□□□ -0.3
NUP85-211ENST00000579324 FPGT-TNNI3KV9GXZ4 949 aa13.17□□□□□ -0.3
NUP85-211ENST00000579324 CCDC171Q6TFL3 1326 aa13.17□□□□□ -0.3
NUP85-211ENST00000579324 RFX7Q2KHR2 1363 aa13.17□□□□□ -0.3
NUP85-211ENST00000579324 MED23Q9ULK4 1368 aa13.17□□□□□ -0.3
NUP85-211ENST00000579324 XRCC6P12956 609 aaKnown RBP eCLIP13.17□□□□□ -0.3
NUP85-211ENST00000579324 ATP5JP18859 108 aa13.17□□□□□ -0.3
NUP85-211ENST00000579324 NECTIN1Q15223 517 aa13.17□□□□□ -0.3
NUP85-211ENST00000579324 DDX54Q8TDD1 881 aaKnown RBP13.17□□□□□ -0.3
NUP85-211ENST00000579324 CWC25Q9NXE8 425 aaPredicted RBP13.17□□□□□ -0.3
NUP85-211ENST00000579324 TFCP2Q12800 502 aa13.16□□□□□ -0.3
NUP85-211ENST00000579324 NMIQ13287 307 aaPredicted RBP13.16□□□□□ -0.3
NUP85-211ENST00000579324 DBNLQ9UJU6 430 aaKnown RBP13.16□□□□□ -0.3
NUP85-211ENST00000579324 BRWD3Q6RI45 1802 aa13.16□□□□□ -0.3
NUP85-211ENST00000579324 A0A0U1RQG5 324 aaPredicted RBP13.15□□□□□ -0.3
NUP85-211ENST00000579324 CCDC191Q8NCU4 936 aa13.15□□□□□ -0.3
NUP85-211ENST00000579324 MAP4K1Q92918 833 aa13.15□□□□□ -0.3
NUP85-211ENST00000579324 FAM227BQ96M60 508 aa13.15□□□□□ -0.3
NUP85-211ENST00000579324 MCTP1Q6DN14 999 aa13.15□□□□□ -0.3
NUP85-211ENST00000579324 LMBR1LQ6UX01 489 aa13.15□□□□□ -0.3
NUP85-211ENST00000579324 VSIG10Q8N0Z9 540 aa13.15□□□□□ -0.3
NUP85-211ENST00000579324 ISCA1Q9BUE6 129 aa13.15□□□□□ -0.3
NUP85-211ENST00000579324 BOLA2Q9H3K6 86 aa13.15□□□□□ -0.3
NUP85-211ENST00000579324 ZSWIM6Q9HCJ5 1215 aa13.15□□□□□ -0.3
NUP85-211ENST00000579324 ITGB4P16144 1822 aa13.14□□□□□ -0.31
NUP85-211ENST00000579324 WNK3Q9BYP7 1800 aa13.14□□□□□ -0.31
NUP85-211ENST00000579324 RPAP1Q9BWH6 1393 aaPredicted RBP13.14□□□□□ -0.31
NUP85-211ENST00000579324 A0A0D9SFI3 127 aa13.14□□□□□ -0.31
NUP85-211ENST00000579324 MRE11P49959 708 aa13.14□□□□□ -0.31
NUP85-211ENST00000579324 BARGINQ6ZT62 677 aa13.14□□□□□ -0.31
NUP85-211ENST00000579324 RUFY3Q7L099 469 aa13.14□□□□□ -0.31
NUP85-211ENST00000579324 ATG9AQ7Z3C6 839 aa13.14□□□□□ -0.31
NUP85-211ENST00000579324 DHX37Q8IY37 1157 aaKnown RBP13.14□□□□□ -0.31
NUP85-211ENST00000579324 GPR108Q9NPR9 543 aa13.14□□□□□ -0.31
NUP85-211ENST00000579324 TMOD3Q9NYL9 352 aa13.14□□□□□ -0.31
NUP85-211ENST00000579324 AK2P54819 239 aa13.13□□□□□ -0.31
NUP85-211ENST00000579324 THRAP3Q9Y2W1 955 aaKnown RBP13.13□□□□□ -0.31
NUP85-211ENST00000579324 TRIM28Q13263 835 aaKnown RBP13.13□□□□□ -0.31
NUP85-211ENST00000579324 VPS53Q5VIR6 699 aa13.13□□□□□ -0.31
NUP85-211ENST00000579324 NOL8Q76FK4 1167 aaKnown RBP13.13□□□□□ -0.31
NUP85-211ENST00000579324 FSD1Q9BTV5 496 aa13.13□□□□□ -0.31
NUP85-211ENST00000579324 ATG3Q9NT62 314 aa13.13□□□□□ -0.31
NUP85-211ENST00000579324 LIMCH1Q9UPQ0 1083 aa13.13□□□□□ -0.31
NUP85-211ENST00000579324 RBM8AQ9Y5S9 174 aaKnown RBP13.13□□□□□ -0.31
NUP85-211ENST00000579324 ADCK5Q3MIX3 580 aa13.12□□□□□ -0.31
NUP85-211ENST00000579324 CREB3L3Q68CJ9 461 aa13.12□□□□□ -0.31
NUP85-211ENST00000579324 PRPF40BQ6NWY9 871 aaKnown RBP13.12□□□□□ -0.31
NUP85-211ENST00000579324 GAS2L3Q86XJ1 694 aa13.12□□□□□ -0.31
NUP85-211ENST00000579324 PIGBQ92521 554 aa13.12□□□□□ -0.31
NUP85-211ENST00000579324 HAUS7Q99871 368 aa13.12□□□□□ -0.31
NUP85-211ENST00000579324 TEX13AQ9BXU3 409 aaPredicted RBP13.12□□□□□ -0.31
NUP85-211ENST00000579324 ZBTB3Q9H5J0 574 aa13.12□□□□□ -0.31
NUP85-211ENST00000579324 DDX49Q9Y6V7 483 aaKnown RBP13.12□□□□□ -0.31
NUP85-211ENST00000579324 CASTP20810 708 aaKnown RBP13.12□□□□□ -0.31
NUP85-211ENST00000579324 DBNDD2Q9BQY9 259 aa13.12□□□□□ -0.31
NUP85-211ENST00000579324 GRPEL1Q9HAV7 217 aa13.12□□□□□ -0.31
NUP85-211ENST00000579324 BCL9O00512 1426 aa13.11□□□□□ -0.31
NUP85-211ENST00000579324 ZNF609O15014 1411 aa13.11□□□□□ -0.31
NUP85-211ENST00000579324 SLC27A2O14975 620 aa13.11□□□□□ -0.31
NUP85-211ENST00000579324 CIAO1O76071 339 aa13.11□□□□□ -0.31
NUP85-211ENST00000579324 TCIRG1Q13488 830 aa13.11□□□□□ -0.31
NUP85-211ENST00000579324 TSGA10IPQ3SY00 556 aa13.11□□□□□ -0.31
NUP85-211ENST00000579324 TICAM2Q86XR7 235 aa13.11□□□□□ -0.31
NUP85-211ENST00000579324 JAKMIP1Q96N16 626 aaKnown RBP13.11□□□□□ -0.31
NUP85-211ENST00000579324 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.11□□□□□ -0.31
NUP85-211ENST00000579324 ASAP1Q9ULH1 1129 aa13.11□□□□□ -0.31
NUP85-211ENST00000579324 IL15P40933 162 aaPredicted RBP13.1□□□□□ -0.31
NUP85-211ENST00000579324 ZNF445P59923 1031 aa13.1□□□□□ -0.31
NUP85-211ENST00000579324 DDB1Q16531 1140 aa13.1□□□□□ -0.31
NUP85-211ENST00000579324 TPRNQ4KMQ1 711 aa13.1□□□□□ -0.31
NUP85-211ENST00000579324 USPL1Q5W0Q7 1092 aa13.1□□□□□ -0.31
NUP85-211ENST00000579324 DNAJC10Q8IXB1 793 aa13.1□□□□□ -0.31
NUP85-211ENST00000579324 EDC3Q96F86 508 aaKnown RBP13.1□□□□□ -0.31
NUP85-211ENST00000579324 BCCIPQ9P287 314 aaKnown RBP eCLIP13.1□□□□□ -0.31
NUP85-211ENST00000579324 TAF5LO75529 589 aa13.1□□□□□ -0.31
NUP85-211ENST00000579324 CPA1P15085 419 aa13.1□□□□□ -0.31
NUP85-211ENST00000579324 ZNF589Q86UQ0 364 aaPredicted RBP13.1□□□□□ -0.31
NUP85-211ENST00000579324 GPT2Q8TD30 523 aa13.1□□□□□ -0.31
NUP85-211ENST00000579324 PLA2G12BQ9BX93 195 aa13.1□□□□□ -0.31
NUP85-211ENST00000579324 PANK2Q9BZ23 570 aa13.1□□□□□ -0.31
NUP85-211ENST00000579324 ALDH8A1Q9H2A2 487 aaPredicted RBP13.1□□□□□ -0.31
NUP85-211ENST00000579324 PDRG1Q9NUG6 133 aa13.1□□□□□ -0.31
NUP85-211ENST00000579324 CYP46A1Q9Y6A2 500 aa13.1□□□□□ -0.31
NUP85-211ENST00000579324 PALLDQ8WX93 1383 aa13.1□□□□□ -0.31
NUP85-211ENST00000579324 THSD7AQ9UPZ6 1657 aa13.09□□□□□ -0.31
NUP85-211ENST00000579324 WDR33Q9C0J8 1336 aaKnown RBP13.09□□□□□ -0.31
NUP85-211ENST00000579324 SPEF2Q9C093 1822 aa13.09□□□□□ -0.31
NUP85-211ENST00000579324 EYA2O00167 538 aa13.09□□□□□ -0.31
NUP85-211ENST00000579324 ZKSCAN1P17029 563 aaPredicted RBP13.09□□□□□ -0.31
NUP85-211ENST00000579324 ZSCAN31Q96LW9 406 aaPredicted RBP13.09□□□□□ -0.31
NUP85-211ENST00000579324 PRPF40AO75400 957 aaKnown RBP13.08□□□□□ -0.31
NUP85-211ENST00000579324 LARGE1O95461 756 aa13.08□□□□□ -0.31
NUP85-211ENST00000579324 HSP90B1P14625 803 aaKnown RBP13.08□□□□□ -0.31
NUP85-211ENST00000579324 KCNA4P22459 653 aa13.08□□□□□ -0.31
NUP85-211ENST00000579324 SF3B2Q13435 895 aaKnown RBP13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms