RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 CCDC82Q8N4S0 544 aa6.83□□□□□ -1.32
CDC27-213ENST00000571643 DNAJB12Q9NXW2 375 aaKnown RBP6.83□□□□□ -1.32
CDC27-213ENST00000571643 FRRS1LQ9P0K9 344 aa6.83□□□□□ -1.32
CDC27-213ENST00000571643 STARD13Q9Y3M8 1113 aa6.83□□□□□ -1.32
CDC27-213ENST00000571643 CHRNA4P43681 627 aa6.82□□□□□ -1.32
CDC27-213ENST00000571643 GPLD1P80108 840 aa6.82□□□□□ -1.32
CDC27-213ENST00000571643 C20orf204Q6ZNR8 217 aa6.82□□□□□ -1.32
CDC27-213ENST00000571643 DHX32Q7L7V1 743 aaKnown RBP6.82□□□□□ -1.32
CDC27-213ENST00000571643 IGFLR1Q9H665 355 aa6.82□□□□□ -1.32
CDC27-213ENST00000571643 JPH1Q9HDC5 661 aaPredicted RBP6.82□□□□□ -1.32
CDC27-213ENST00000571643 RTCBQ9Y3I0 505 aaKnown RBP6.82□□□□□ -1.32
CDC27-213ENST00000571643 XYLBO75191 536 aa6.81□□□□□ -1.32
CDC27-213ENST00000571643 APBA3O96018 575 aa6.81□□□□□ -1.32
CDC27-213ENST00000571643 FURINP09958 794 aa6.81□□□□□ -1.32
CDC27-213ENST00000571643 NID1P14543 1247 aa6.81□□□□□ -1.32
CDC27-213ENST00000571643 ATP2B4P23634 1241 aa6.81□□□□□ -1.32
CDC27-213ENST00000571643 NRLP54845 237 aa6.81□□□□□ -1.32
CDC27-213ENST00000571643 TRIM28Q13263 835 aaKnown RBP6.81□□□□□ -1.32
CDC27-213ENST00000571643 RGL4Q8IZJ4 473 aa6.81□□□□□ -1.32
CDC27-213ENST00000571643 TRPM4Q8TD43 1214 aa6.81□□□□□ -1.32
CDC27-213ENST00000571643 MKNK1Q9BUB5 465 aa6.81□□□□□ -1.32
CDC27-213ENST00000571643 KRTAP4-8Q9BYQ9 185 aa6.81□□□□□ -1.32
CDC27-213ENST00000571643 OPLAHO14841 1288 aa6.8□□□□□ -1.32
CDC27-213ENST00000571643 RGS9O75916 674 aaPredicted RBP6.8□□□□□ -1.32
CDC27-213ENST00000571643 ITGB7P26010 798 aa6.8□□□□□ -1.32
CDC27-213ENST00000571643 GRNP28799 593 aaKnown RBP6.8□□□□□ -1.32
CDC27-213ENST00000571643 RAC1P63000 192 aa6.8□□□□□ -1.32
CDC27-213ENST00000571643 PSAPL1Q6NUJ1 521 aa6.8□□□□□ -1.32
CDC27-213ENST00000571643 KRT25Q7Z3Z0 450 aa6.8□□□□□ -1.32
CDC27-213ENST00000571643 CMTR1Q8N1G2 835 aaKnown RBP6.8□□□□□ -1.32
CDC27-213ENST00000571643 PIK3R5Q8WYR1 880 aa6.8□□□□□ -1.32
CDC27-213ENST00000571643 FNDC3AQ9Y2H6 1198 aaKnown RBP6.8□□□□□ -1.32
CDC27-213ENST00000571643 PSAPP07602 524 aa6.79□□□□□ -1.32
CDC27-213ENST00000571643 SOX18P35713 384 aa6.79□□□□□ -1.32
CDC27-213ENST00000571643 PLAURQ03405 335 aa6.79□□□□□ -1.32
CDC27-213ENST00000571643 FAM35AQ86V20 835 aa6.79□□□□□ -1.32
CDC27-213ENST00000571643 ETFBKMTQ8IXQ9 262 aa6.79□□□□□ -1.32
CDC27-213ENST00000571643 STIM2Q9P246 746 aa6.79□□□□□ -1.32
CDC27-213ENST00000571643 MTMR7Q9Y216 660 aa6.79□□□□□ -1.32
CDC27-213ENST00000571643 SASH3O75995 380 aa6.78□□□□□ -1.32
CDC27-213ENST00000571643 RPLP1P05386 114 aaKnown RBP6.78□□□□□ -1.32
CDC27-213ENST00000571643 HOXD8P13378 290 aaPredicted RBP6.78□□□□□ -1.32
CDC27-213ENST00000571643 COL9A3Q14050 684 aaPredicted RBP6.78□□□□□ -1.32
CDC27-213ENST00000571643 TRAPPC3LQ5T215 181 aa6.78□□□□□ -1.32
CDC27-213ENST00000571643 ELMSAN1Q6PJG2 1045 aa6.78□□□□□ -1.32
CDC27-213ENST00000571643 TTC9Q92623 222 aa6.78□□□□□ -1.32
CDC27-213ENST00000571643 SAP130Q9H0E3 1048 aa6.78□□□□□ -1.32
CDC27-213ENST00000571643 RBSNQ9H1K0 784 aa6.78□□□□□ -1.32
CDC27-213ENST00000571643 TLR7Q9NYK1 1049 aaKnown RBP6.78□□□□□ -1.32
CDC27-213ENST00000571643 ZFATQ9P243 1243 aa6.78□□□□□ -1.32
CDC27-213ENST00000571643 NAGPAQ9UK23 515 aa6.78□□□□□ -1.32
CDC27-213ENST00000571643 TNFRSF10BO14763 440 aa6.77□□□□□ -1.33
CDC27-213ENST00000571643 TARSP26639 723 aaKnown RBP6.77□□□□□ -1.33
CDC27-213ENST00000571643 ZAP70P43403 619 aa6.77□□□□□ -1.33
CDC27-213ENST00000571643 NLRP13Q86W25 1043 aa6.77□□□□□ -1.33
CDC27-213ENST00000571643 DTWD1Q8N5C7 304 aa6.77□□□□□ -1.33
CDC27-213ENST00000571643 NUDT8Q8WV74 236 aa6.77□□□□□ -1.33
CDC27-213ENST00000571643 KCNMB2Q9Y691 235 aa6.77□□□□□ -1.33
CDC27-213ENST00000571643 C9orf172C9J069 976 aa6.76□□□□□ -1.33
CDC27-213ENST00000571643 CPB1P15086 417 aa6.76□□□□□ -1.33
CDC27-213ENST00000571643 ELNP15502 786 aa6.76□□□□□ -1.33
CDC27-213ENST00000571643 GATA4P43694 442 aa6.76□□□□□ -1.33
CDC27-213ENST00000571643 AFF1P51825 1210 aaKnown RBP6.76□□□□□ -1.33
CDC27-213ENST00000571643 NAA30Q147X3 362 aaPredicted RBP6.76□□□□□ -1.33
CDC27-213ENST00000571643 C8orf86Q6ZUL3 223 aa6.76□□□□□ -1.33
CDC27-213ENST00000571643 HELQQ8TDG4 1101 aa6.76□□□□□ -1.33
CDC27-213ENST00000571643 DCAF11Q8TEB1 546 aa6.76□□□□□ -1.33
CDC27-213ENST00000571643 LPIN3Q9BQK8 851 aa6.76□□□□□ -1.33
CDC27-213ENST00000571643 A0A0A0MRY4 1105 aa6.75□□□□□ -1.33
CDC27-213ENST00000571643 UBAP1LF5GYI3 381 aa6.75□□□□□ -1.33
CDC27-213ENST00000571643 GHRHP01286 108 aa6.75□□□□□ -1.33
CDC27-213ENST00000571643 PCSK2P16519 638 aa6.75□□□□□ -1.33
CDC27-213ENST00000571643 EIF2AK2P19525 551 aaKnown RBP6.75□□□□□ -1.33
CDC27-213ENST00000571643 NRG1Q02297 640 aaPredicted RBP6.75□□□□□ -1.33
CDC27-213ENST00000571643 B4GALNT3Q6L9W6 998 aa6.75□□□□□ -1.33
CDC27-213ENST00000571643 CACTIN-AS1Q8N1I8 211 aa6.75□□□□□ -1.33
CDC27-213ENST00000571643 USTQ9Y2C2 406 aa6.75□□□□□ -1.33
CDC27-213ENST00000571643 PERM1Q5SV97 790 aa6.74□□□□□ -1.33
CDC27-213ENST00000571643 MSL1Q68DK7 614 aa6.74□□□□□ -1.33
CDC27-213ENST00000571643 USP20Q9Y2K6 914 aa6.74□□□□□ -1.33
CDC27-213ENST00000571643 TMEM88BA6NKF7 163 aa6.73□□□□□ -1.33
CDC27-213ENST00000571643 MMP20O60882 483 aa6.73□□□□□ -1.33
CDC27-213ENST00000571643 TRIP4Q15650 581 aaPredicted RBP6.73□□□□□ -1.33
CDC27-213ENST00000571643 PDE12Q6L8Q7 609 aaKnown RBP6.73□□□□□ -1.33
CDC27-213ENST00000571643 WFDC8Q8IUA0 241 aa6.73□□□□□ -1.33
CDC27-213ENST00000571643 FMR1NBQ8N0W7 255 aaPredicted RBP6.73□□□□□ -1.33
CDC27-213ENST00000571643 SRA1Q9HD15 236 aaKnown RBP6.73□□□□□ -1.33
CDC27-213ENST00000571643 SLAIN2Q9P270 581 aa6.73□□□□□ -1.33
CDC27-213ENST00000571643 LOC102724428A0A0B4J2F2 783 aa6.72□□□□□ -1.33
CDC27-213ENST00000571643 ZBTB42B2RXF5 422 aa6.72□□□□□ -1.33
CDC27-213ENST00000571643 FAM229AH3BQW9 127 aa6.72□□□□□ -1.33
CDC27-213ENST00000571643 SSFA2P28290 1259 aa6.72□□□□□ -1.33
CDC27-213ENST00000571643 SIK1P57059 783 aa6.72□□□□□ -1.33
CDC27-213ENST00000571643 MLLT1Q03111 559 aaPredicted RBP6.72□□□□□ -1.33
CDC27-213ENST00000571643 NKAPLQ5M9Q1 402 aa6.72□□□□□ -1.33
CDC27-213ENST00000571643 TTC39BQ5VTQ0 682 aaPredicted RBP6.72□□□□□ -1.33
CDC27-213ENST00000571643 ALKBH2Q6NS38 261 aa6.72□□□□□ -1.33
CDC27-213ENST00000571643 CAPN12Q6ZSI9 719 aa6.72□□□□□ -1.33
CDC27-213ENST00000571643 TTC16Q8NEE8 873 aa6.72□□□□□ -1.33
CDC27-213ENST00000571643 OR13H1Q8NG92 308 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms