RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 OS9Q13438 667 aaPredicted RBP11.65□□□□□ -0.54
TCF4-211ENST00000561992 PTPN14Q15678 1187 aa11.65□□□□□ -0.54
TCF4-211ENST00000561992 TICAM2Q86XR7 235 aa11.65□□□□□ -0.54
TCF4-211ENST00000561992 CACTINQ8WUQ7 758 aaKnown RBP11.65□□□□□ -0.54
TCF4-211ENST00000561992 LLPHQ9BRT6 129 aaKnown RBP11.65□□□□□ -0.54
TCF4-211ENST00000561992 IMPACTQ9P2X3 320 aa11.65□□□□□ -0.54
TCF4-211ENST00000561992 MTMR7Q9Y216 660 aa11.65□□□□□ -0.54
TCF4-211ENST00000561992 NWD1Q149M9 1564 aa11.65□□□□□ -0.55
TCF4-211ENST00000561992 SLIT1O75093 1534 aa11.65□□□□□ -0.55
TCF4-211ENST00000561992 KCNJ4P48050 445 aa11.64□□□□□ -0.55
TCF4-211ENST00000561992 MAPK8IP2Q13387 824 aaPredicted RBP11.64□□□□□ -0.55
TCF4-211ENST00000561992 IL17REQ8NFR9 667 aa11.64□□□□□ -0.55
TCF4-211ENST00000561992 TMEM2Q9UHN6 1383 aa11.64□□□□□ -0.55
TCF4-211ENST00000561992 MED23Q9ULK4 1368 aa11.64□□□□□ -0.55
TCF4-211ENST00000561992 SLFN14P0C7P3 912 aa11.64□□□□□ -0.55
TCF4-211ENST00000561992 FGD1P98174 961 aa11.64□□□□□ -0.55
TCF4-211ENST00000561992 PDE4CQ08493 712 aa11.64□□□□□ -0.55
TCF4-211ENST00000561992 LRMPQ12912 555 aa11.64□□□□□ -0.55
TCF4-211ENST00000561992 IQCB1Q15051 598 aa11.64□□□□□ -0.55
TCF4-211ENST00000561992 ADAMTS13Q76LX8 1427 aa11.63□□□□□ -0.55
TCF4-211ENST00000561992 PLEKHG1Q9ULL1 1385 aa11.63□□□□□ -0.55
TCF4-211ENST00000561992 CPA1P15085 419 aa11.63□□□□□ -0.55
TCF4-211ENST00000561992 RESTQ13127 1097 aa11.63□□□□□ -0.55
TCF4-211ENST00000561992 TERF2Q15554 542 aa11.63□□□□□ -0.55
TCF4-211ENST00000561992 CAMK4Q16566 473 aa11.63□□□□□ -0.55
TCF4-211ENST00000561992 NECAB1Q8N987 351 aa11.63□□□□□ -0.55
TCF4-211ENST00000561992 BICD2Q8TD16 824 aa11.63□□□□□ -0.55
TCF4-211ENST00000561992 NAT10Q9H0A0 1025 aaKnown RBP11.63□□□□□ -0.55
TCF4-211ENST00000561992 ANO10Q9NW15 660 aa11.63□□□□□ -0.55
TCF4-211ENST00000561992 NPHP4O75161 1426 aaPredicted RBP11.63□□□□□ -0.55
TCF4-211ENST00000561992 SLU7O95391 586 aaKnown RBP11.62□□□□□ -0.55
TCF4-211ENST00000561992 NBPF7P0C2Y1 421 aaPredicted RBP11.62□□□□□ -0.55
TCF4-211ENST00000561992 USPL1Q5W0Q7 1092 aa11.62□□□□□ -0.55
TCF4-211ENST00000561992 NAA16Q6N069 864 aaPredicted RBP11.62□□□□□ -0.55
TCF4-211ENST00000561992 CKAP2LQ8IYA6 745 aa11.62□□□□□ -0.55
TCF4-211ENST00000561992 OVOS2A0A0G2JMS6 1433 aa11.62□□□□□ -0.55
TCF4-211ENST00000561992 KDM3BQ7LBC6 1761 aa11.62□□□□□ -0.55
TCF4-211ENST00000561992 MRC1P22897 1456 aa11.62□□□□□ -0.55
TCF4-211ENST00000561992 GTF3C6Q969F1 213 aa11.62□□□□□ -0.55
TCF4-211ENST00000561992 LARP6Q9BRS8 491 aaKnown RBP11.62□□□□□ -0.55
TCF4-211ENST00000561992 DNAJC25Q9H1X3 360 aa11.62□□□□□ -0.55
TCF4-211ENST00000561992 NRBP1Q9UHY1 535 aa11.62□□□□□ -0.55
TCF4-211ENST00000561992 UTYO14607 1347 aa11.61□□□□□ -0.55
TCF4-211ENST00000561992 CCP110O43303 1012 aa11.61□□□□□ -0.55
TCF4-211ENST00000561992 NRDCO43847 1150 aa11.61□□□□□ -0.55
TCF4-211ENST00000561992 NR1I2O75469 434 aa11.61□□□□□ -0.55
TCF4-211ENST00000561992 EIF4A1P60842 406 aaKnown RBP11.61□□□□□ -0.55
TCF4-211ENST00000561992 LMOD2Q6P5Q4 547 aa11.61□□□□□ -0.55
TCF4-211ENST00000561992 LARP1Q6PKG0 1096 aaKnown RBP11.61□□□□□ -0.55
TCF4-211ENST00000561992 PGBD1Q96JS3 809 aa11.61□□□□□ -0.55
TCF4-211ENST00000561992 OSBPL5Q9H0X9 879 aaPredicted RBP11.61□□□□□ -0.55
TCF4-211ENST00000561992 PHAXQ9H814 394 aaKnown RBP11.61□□□□□ -0.55
TCF4-211ENST00000561992 RCOR1Q9UKL0 485 aa11.61□□□□□ -0.55
TCF4-211ENST00000561992 ANKARQ7Z5J8 1434 aa11.61□□□□□ -0.55
TCF4-211ENST00000561992 PSDA5PKW4 1024 aaPredicted RBP11.61□□□□□ -0.55
TCF4-211ENST00000561992 SKILP12757 684 aa11.61□□□□□ -0.55
TCF4-211ENST00000561992 NMIQ13287 307 aaPredicted RBP11.61□□□□□ -0.55
TCF4-211ENST00000561992 TOB2Q14106 344 aaPredicted RBP11.61□□□□□ -0.55
TCF4-211ENST00000561992 CCAR2Q8N163 923 aaKnown RBP11.61□□□□□ -0.55
TCF4-211ENST00000561992 CCDC150Q8NCX0 1101 aa11.61□□□□□ -0.55
TCF4-211ENST00000561992 BPIFA3Q9BQP9 254 aa11.61□□□□□ -0.55
TCF4-211ENST00000561992 NCAPD2Q15021 1401 aa11.6□□□□□ -0.55
TCF4-211ENST00000561992 PIK3C2AO00443 1686 aa11.6□□□□□ -0.55
TCF4-211ENST00000561992 BECN2A8MW95 431 aa11.6□□□□□ -0.55
TCF4-211ENST00000561992 HOXC9P31274 260 aa11.6□□□□□ -0.55
TCF4-211ENST00000561992 BMS1Q14692 1282 aaKnown RBP11.6□□□□□ -0.55
TCF4-211ENST00000561992 CCDC144BQ3MJ40 725 aa11.6□□□□□ -0.55
TCF4-211ENST00000561992 FERMT3Q86UX7 667 aa11.6□□□□□ -0.55
TCF4-211ENST00000561992 CCDC144CPQ8IYA2 1237 aa11.6□□□□□ -0.55
TCF4-211ENST00000561992 CEP57L1Q8IYX8 460 aa11.6□□□□□ -0.55
TCF4-211ENST00000561992 ZNF396Q96N95 335 aaPredicted RBP11.6□□□□□ -0.55
TCF4-211ENST00000561992 L2HGDHQ9H9P8 463 aa11.6□□□□□ -0.55
TCF4-211ENST00000561992 CALCOCO1Q9P1Z2 691 aa11.6□□□□□ -0.55
TCF4-211ENST00000561992 DBF4Q9UBU7 674 aaPredicted RBP11.6□□□□□ -0.55
TCF4-211ENST00000561992 ADCY9O60503 1353 aa11.6□□□□□ -0.55
TCF4-211ENST00000561992 PI4KAP2A4QPH2 592 aa11.6□□□□□ -0.55
TCF4-211ENST00000561992 CCZ1BP86790 482 aa11.6□□□□□ -0.55
TCF4-211ENST00000561992 CCZ1P86791 482 aaPredicted RBP11.6□□□□□ -0.55
TCF4-211ENST00000561992 CCDC73Q6ZRK6 1079 aa11.6□□□□□ -0.55
TCF4-211ENST00000561992 PI4KAP1Q8N8J0 262 aa11.6□□□□□ -0.55
TCF4-211ENST00000561992 SMARCC2Q8TAQ2 1214 aa11.6□□□□□ -0.55
TCF4-211ENST00000561992 TNRQ92752 1358 aa11.59□□□□□ -0.55
TCF4-211ENST00000561992 UBR1Q8IWV7 1749 aa11.59□□□□□ -0.55
TCF4-211ENST00000561992 CCDC69A6NI79 296 aa11.59□□□□□ -0.55
TCF4-211ENST00000561992 H3BQV1 296 aa11.59□□□□□ -0.55
TCF4-211ENST00000561992 KMT5BQ4FZB7 885 aa11.59□□□□□ -0.55
TCF4-211ENST00000561992 IFFO2Q5TF58 517 aa11.59□□□□□ -0.55
TCF4-211ENST00000561992 AACSQ86V21 672 aa11.59□□□□□ -0.55
TCF4-211ENST00000561992 U3KPZ7 1027 aaPredicted RBP11.59□□□□□ -0.55
TCF4-211ENST00000561992 LMTK3Q96Q04 1460 aa11.59□□□□□ -0.55
TCF4-211ENST00000561992 ATP8B1O43520 1251 aa11.58□□□□□ -0.56
TCF4-211ENST00000561992 KINO60870 393 aaKnown RBP11.58□□□□□ -0.56
TCF4-211ENST00000561992 SLC20A2Q08357 652 aa11.58□□□□□ -0.56
TCF4-211ENST00000561992 G3BP1Q13283 466 aaKnown RBP eCLIP11.58□□□□□ -0.56
TCF4-211ENST00000561992 TSPYL1Q9H0U9 437 aa11.58□□□□□ -0.56
TCF4-211ENST00000561992 TFIP11Q9UBB9 837 aaKnown RBP11.58□□□□□ -0.56
TCF4-211ENST00000561992 ZNF215Q9UL58 517 aaPredicted RBP11.58□□□□□ -0.56
TCF4-211ENST00000561992 ATF5Q9Y2D1 282 aaPredicted RBP11.58□□□□□ -0.56
TCF4-211ENST00000561992 A0A0U1RQG5 324 aaPredicted RBP11.58□□□□□ -0.56
TCF4-211ENST00000561992 TPM1P09493 284 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms