RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 TM4SF1P30408 202 aa7.5□□□□□ -1.21
HERC1-213ENST00000561359 CYP4F22Q6NT55 531 aa7.5□□□□□ -1.21
HERC1-213ENST00000561359 TIAM2Q8IVF5 1701 aa7.49□□□□□ -1.21
HERC1-213ENST00000561359 A0A1W2PP64 1363 aa7.49□□□□□ -1.21
HERC1-213ENST00000561359 RGPD2P0DJD1 1756 aa7.49□□□□□ -1.21
HERC1-213ENST00000561359 RCCD1A6NED2 376 aa7.49□□□□□ -1.21
HERC1-213ENST00000561359 CRKLP46109 303 aaKnown RBP7.49□□□□□ -1.21
HERC1-213ENST00000561359 KCNC4Q03721 635 aa7.49□□□□□ -1.21
HERC1-213ENST00000561359 HSP90AB2PQ58FF8 381 aa7.49□□□□□ -1.21
HERC1-213ENST00000561359 ZNF622Q969S3 477 aaKnown RBP eCLIP7.49□□□□□ -1.21
HERC1-213ENST00000561359 GCC1Q96CN9 775 aa7.49□□□□□ -1.21
HERC1-213ENST00000561359 TAOK3Q9H2K8 898 aa7.49□□□□□ -1.21
HERC1-213ENST00000561359 HACL1Q9UJ83 578 aa7.49□□□□□ -1.21
HERC1-213ENST00000561359 ITGB4P16144 1822 aa7.49□□□□□ -1.21
HERC1-213ENST00000561359 KDRP35968 1356 aa7.48□□□□□ -1.21
HERC1-213ENST00000561359 AOC2O75106 756 aa7.48□□□□□ -1.21
HERC1-213ENST00000561359 EPHX2P34913 555 aa7.48□□□□□ -1.21
HERC1-213ENST00000561359 MAP2K2P36507 400 aa7.48□□□□□ -1.21
HERC1-213ENST00000561359 USPL1Q5W0Q7 1092 aa7.48□□□□□ -1.21
HERC1-213ENST00000561359 PNMA8AQ86V59 439 aaPredicted RBP7.48□□□□□ -1.21
HERC1-213ENST00000561359 IFNL2Q8IZJ0 200 aa7.48□□□□□ -1.21
HERC1-213ENST00000561359 DDX21Q9NR30 783 aaKnown RBP eCLIP7.48□□□□□ -1.21
HERC1-213ENST00000561359 A0A0C4DFX4 3053 aa7.47□□□□□ -1.21
HERC1-213ENST00000561359 PTCD1O75127 700 aaKnown RBP7.47□□□□□ -1.21
HERC1-213ENST00000561359 SERPINB2P05120 415 aa7.47□□□□□ -1.21
HERC1-213ENST00000561359 PHKG2P15735 406 aa7.47□□□□□ -1.21
HERC1-213ENST00000561359 FECHP22830 423 aa7.47□□□□□ -1.21
HERC1-213ENST00000561359 NFIXQ14938 502 aa7.47□□□□□ -1.21
HERC1-213ENST00000561359 TMEM134Q9H6X4 195 aa7.47□□□□□ -1.21
HERC1-213ENST00000561359 ROCK2O75116 1388 aaKnown RBP7.46□□□□□ -1.21
HERC1-213ENST00000561359 INSRP06213 1382 aa7.46□□□□□ -1.21
HERC1-213ENST00000561359 CASP8AP2Q9UKL3 1982 aa7.46□□□□□ -1.21
HERC1-213ENST00000561359 HABP4Q5JVS0 413 aaKnown RBP7.46□□□□□ -1.22
HERC1-213ENST00000561359 NBPF15Q8N660 670 aa7.46□□□□□ -1.22
HERC1-213ENST00000561359 PXYLP1Q8TE99 480 aa7.46□□□□□ -1.22
HERC1-213ENST00000561359 CCDC88AQ3V6T2 1871 aa7.46□□□□□ -1.22
HERC1-213ENST00000561359 LTBP3Q9NS15 1303 aa7.46□□□□□ -1.22
HERC1-213ENST00000561359 ERVV-2B6SEH9 535 aa7.45□□□□□ -1.22
HERC1-213ENST00000561359 GPR37O15354 613 aa7.45□□□□□ -1.22
HERC1-213ENST00000561359 FMR1Q06787 632 aaKnown RBP eCLIP7.45□□□□□ -1.22
HERC1-213ENST00000561359 METTL3Q86U44 580 aaKnown RBP7.45□□□□□ -1.22
HERC1-213ENST00000561359 PRR14Q9BWN1 585 aa7.45□□□□□ -1.22
HERC1-213ENST00000561359 RNF123Q5XPI4 1314 aa7.45□□□□□ -1.22
HERC1-213ENST00000561359 FLT4P35916 1363 aa7.45□□□□□ -1.22
HERC1-213ENST00000561359 BRPF1P55201 1214 aaPredicted RBP7.44□□□□□ -1.22
HERC1-213ENST00000561359 CABP4P57796 275 aa7.44□□□□□ -1.22
HERC1-213ENST00000561359 SOGA3Q5TF21 947 aa7.44□□□□□ -1.22
HERC1-213ENST00000561359 CIAPIN1Q6FI81 312 aa7.44□□□□□ -1.22
HERC1-213ENST00000561359 BICDL1Q6ZP65 573 aa7.44□□□□□ -1.22
HERC1-213ENST00000561359 MTRQ99707 1265 aa7.44□□□□□ -1.22
HERC1-213ENST00000561359 GGNBP2Q9H3C7 697 aa7.44□□□□□ -1.22
HERC1-213ENST00000561359 PDZRN3Q9UPQ7 1066 aa7.44□□□□□ -1.22
HERC1-213ENST00000561359 TLL2Q9Y6L7 1015 aa7.44□□□□□ -1.22
HERC1-213ENST00000561359 ZNF541Q9H0D2 1346 aa7.44□□□□□ -1.22
HERC1-213ENST00000561359 DLL1O00548 723 aa7.43□□□□□ -1.22
HERC1-213ENST00000561359 PPM1GO15355 546 aaPredicted RBP7.43□□□□□ -1.22
HERC1-213ENST00000561359 PDE6BP35913 854 aa7.43□□□□□ -1.22
HERC1-213ENST00000561359 CST9Q5W186 159 aa7.43□□□□□ -1.22
HERC1-213ENST00000561359 INTS5Q6P9B9 1019 aaKnown RBP7.43□□□□□ -1.22
HERC1-213ENST00000561359 CNKSR1Q969H4 720 aa7.43□□□□□ -1.22
HERC1-213ENST00000561359 IL21Q9HBE4 155 aa7.43□□□□□ -1.22
HERC1-213ENST00000561359 CARMIL3Q8ND23 1372 aa7.43□□□□□ -1.22
HERC1-213ENST00000561359 MYH14Q7Z406 1995 aaKnown RBP7.42□□□□□ -1.22
HERC1-213ENST00000561359 TRAF5O00463 557 aa7.42□□□□□ -1.22
HERC1-213ENST00000561359 NPHP1O15259 732 aa7.42□□□□□ -1.22
HERC1-213ENST00000561359 HSP90AB1P08238 724 aaKnown RBP7.42□□□□□ -1.22
HERC1-213ENST00000561359 COPS2P61201 443 aa7.42□□□□□ -1.22
HERC1-213ENST00000561359 KMT5BQ4FZB7 885 aa7.42□□□□□ -1.22
HERC1-213ENST00000561359 TJAP1Q5JTD0 557 aa7.42□□□□□ -1.22
HERC1-213ENST00000561359 PRPF40BQ6NWY9 871 aaKnown RBP7.42□□□□□ -1.22
HERC1-213ENST00000561359 CCDC24Q8N4L8 307 aa7.42□□□□□ -1.22
HERC1-213ENST00000561359 L3MBTL2Q969R5 705 aa7.42□□□□□ -1.22
HERC1-213ENST00000561359 BRIP1Q9BX63 1249 aa7.42□□□□□ -1.22
HERC1-213ENST00000561359 ZNF277Q9NRM2 450 aaPredicted RBP7.42□□□□□ -1.22
HERC1-213ENST00000561359 NARFQ9UHQ1 456 aa7.42□□□□□ -1.22
HERC1-213ENST00000561359 SCN4AP35499 1836 aa7.42□□□□□ -1.22
HERC1-213ENST00000561359 THSD7BQ9C0I4 1608 aa7.41□□□□□ -1.22
HERC1-213ENST00000561359 LTBP1Q14766 1721 aa7.41□□□□□ -1.22
HERC1-213ENST00000561359 CUL9Q8IWT3 2517 aa7.41□□□□□ -1.22
HERC1-213ENST00000561359 FYB1O15117 783 aa7.41□□□□□ -1.22
HERC1-213ENST00000561359 CELF2O95319 508 aaKnown RBP7.41□□□□□ -1.22
HERC1-213ENST00000561359 CFHP08603 1231 aa7.41□□□□□ -1.22
HERC1-213ENST00000561359 LMOD1P29536 600 aaPredicted RBP7.41□□□□□ -1.22
HERC1-213ENST00000561359 SAPCD2Q86UD0 394 aa7.41□□□□□ -1.22
HERC1-213ENST00000561359 PCDHB3Q9Y5E6 796 aa7.41□□□□□ -1.22
HERC1-213ENST00000561359 EMILIN1Q9Y6C2 1016 aa7.41□□□□□ -1.22
HERC1-213ENST00000561359 SOS1Q07889 1333 aaPredicted RBP7.41□□□□□ -1.22
HERC1-213ENST00000561359 TONSLQ96HA7 1378 aa7.41□□□□□ -1.22
HERC1-213ENST00000561359 DICER1Q9UPY3 1922 aaKnown RBP7.4□□□□□ -1.22
HERC1-213ENST00000561359 FXR1P51114 621 aaKnown RBP eCLIP7.4□□□□□ -1.22
HERC1-213ENST00000561359 CCDC93Q567U6 631 aa7.4□□□□□ -1.22
HERC1-213ENST00000561359 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.4□□□□□ -1.22
HERC1-213ENST00000561359 DNAJC10Q8IXB1 793 aa7.4□□□□□ -1.22
HERC1-213ENST00000561359 GPC2Q8N158 579 aa7.4□□□□□ -1.22
HERC1-213ENST00000561359 RDH13Q8NBN7 331 aa7.4□□□□□ -1.22
HERC1-213ENST00000561359 NLRP7Q8WX94 980 aa7.4□□□□□ -1.22
HERC1-213ENST00000561359 GJA3Q9Y6H8 435 aa7.4□□□□□ -1.22
HERC1-213ENST00000561359 KIF24Q5T7B8 1368 aa7.4□□□□□ -1.22
HERC1-213ENST00000561359 MKI67P46013 3256 aaKnown RBP7.39□□□□□ -1.23
HERC1-213ENST00000561359 COL5A3P25940 1745 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms