RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 CAMSAP1Q5T5Y3 1602 aa6.39□□□□□ -1.39
SPG11-211ENST00000558561 SLC35F4A4IF30 521 aa6.39□□□□□ -1.39
SPG11-211ENST00000558561 EML1O00423 815 aa6.39□□□□□ -1.39
SPG11-211ENST00000558561 TXLNAP40222 546 aa6.39□□□□□ -1.39
SPG11-211ENST00000558561 FKBP5Q13451 457 aaPredicted RBP6.39□□□□□ -1.39
SPG11-211ENST00000558561 PHLDB3Q6NSJ2 640 aa6.39□□□□□ -1.39
SPG11-211ENST00000558561 CAPN12Q6ZSI9 719 aa6.39□□□□□ -1.39
SPG11-211ENST00000558561 GAS2L1Q99501 681 aaPredicted RBP6.39□□□□□ -1.39
SPG11-211ENST00000558561 CXXC1Q9P0U4 656 aaPredicted RBP6.39□□□□□ -1.39
SPG11-211ENST00000558561 ZNF335Q9H4Z2 1342 aaPredicted RBP6.39□□□□□ -1.39
SPG11-211ENST00000558561 NPATQ14207 1427 aa6.39□□□□□ -1.39
SPG11-211ENST00000558561 RRBP1Q9P2E9 1410 aaKnown RBP6.39□□□□□ -1.39
SPG11-211ENST00000558561 SHANK2Q9UPX8 1470 aa6.39□□□□□ -1.39
SPG11-211ENST00000558561 RNF17Q9BXT8 1623 aaKnown RBP6.39□□□□□ -1.39
SPG11-211ENST00000558561 SSFA2P28290 1259 aa6.38□□□□□ -1.39
SPG11-211ENST00000558561 MSX1P28360 303 aa6.38□□□□□ -1.39
SPG11-211ENST00000558561 CCDC155Q8N6L0 562 aa6.38□□□□□ -1.39
SPG11-211ENST00000558561 GPAMQ9HCL2 828 aa6.38□□□□□ -1.39
SPG11-211ENST00000558561 DYRK1BQ9Y463 629 aa6.38□□□□□ -1.39
SPG11-211ENST00000558561 NUP155O75694 1391 aa6.38□□□□□ -1.39
SPG11-211ENST00000558561 PZPP20742 1482 aa6.38□□□□□ -1.39
SPG11-211ENST00000558561 KDM5DQ9BY66 1539 aa6.38□□□□□ -1.39
SPG11-211ENST00000558561 MYO3AQ8NEV4 1616 aa6.37□□□□□ -1.39
SPG11-211ENST00000558561 VWDEQ8N2E2 1590 aa6.37□□□□□ -1.39
SPG11-211ENST00000558561 PRDM15P57071 1507 aaPredicted RBP6.37□□□□□ -1.39
SPG11-211ENST00000558561 ERVK-7P63135 1459 aa6.37□□□□□ -1.39
SPG11-211ENST00000558561 ERBINQ96RT1 1412 aa6.37□□□□□ -1.39
SPG11-211ENST00000558561 VEGFBP49765 207 aa6.37□□□□□ -1.39
SPG11-211ENST00000558561 POTEAQ6S8J7 498 aa6.37□□□□□ -1.39
SPG11-211ENST00000558561 TXNDC2Q86VQ3 553 aa6.37□□□□□ -1.39
SPG11-211ENST00000558561 THEMISQ8N1K5 641 aaPredicted RBP6.37□□□□□ -1.39
SPG11-211ENST00000558561 STAG2Q8N3U4 1231 aa6.37□□□□□ -1.39
SPG11-211ENST00000558561 NGLY1Q96IV0 654 aa6.37□□□□□ -1.39
SPG11-211ENST00000558561 MKNK1Q9BUB5 465 aa6.37□□□□□ -1.39
SPG11-211ENST00000558561 CHMP3Q9Y3E7 222 aa6.37□□□□□ -1.39
SPG11-211ENST00000558561 MYO5BQ9ULV0 1848 aa6.36□□□□□ -1.39
SPG11-211ENST00000558561 DEPDC5O75140 1603 aa6.36□□□□□ -1.39
SPG11-211ENST00000558561 EIF2AK4Q9P2K8 1649 aaKnown RBP6.36□□□□□ -1.39
SPG11-211ENST00000558561 UGGT1Q9NYU2 1555 aa6.36□□□□□ -1.39
SPG11-211ENST00000558561 CEP170BQ9Y4F5 1589 aaPredicted RBP6.36□□□□□ -1.39
SPG11-211ENST00000558561 A2ML1A8K2U0 1454 aa6.36□□□□□ -1.39
SPG11-211ENST00000558561 NAIPQ13075 1403 aa6.36□□□□□ -1.39
SPG11-211ENST00000558561 A0A1B0GTH6 734 aa6.36□□□□□ -1.39
SPG11-211ENST00000558561 FOXO3O43524 673 aa6.36□□□□□ -1.39
SPG11-211ENST00000558561 PPFIA3O75145 1194 aa6.36□□□□□ -1.39
SPG11-211ENST00000558561 F11P03951 625 aa6.36□□□□□ -1.39
SPG11-211ENST00000558561 ATP4AP20648 1035 aa6.36□□□□□ -1.39
SPG11-211ENST00000558561 PDE4CQ08493 712 aa6.36□□□□□ -1.39
SPG11-211ENST00000558561 RIPOR1Q6ZS17 1223 aa6.36□□□□□ -1.39
SPG11-211ENST00000558561 C7orf43Q8WVR3 580 aa6.36□□□□□ -1.39
SPG11-211ENST00000558561 KLRG1Q96E93 195 aa6.36□□□□□ -1.39
SPG11-211ENST00000558561 CUEDC1Q9NWM3 386 aaPredicted RBP6.36□□□□□ -1.39
SPG11-211ENST00000558561 ROCK1Q13464 1354 aa6.35□□□□□ -1.39
SPG11-211ENST00000558561 HIRAP54198 1017 aaPredicted RBP6.35□□□□□ -1.39
SPG11-211ENST00000558561 NAA30Q147X3 362 aaPredicted RBP6.35□□□□□ -1.39
SPG11-211ENST00000558561 NBPF1Q3BBV0 1214 aa6.35□□□□□ -1.39
SPG11-211ENST00000558561 ANKLE2Q86XL3 938 aa6.35□□□□□ -1.39
SPG11-211ENST00000558561 ALDH16A1Q8IZ83 802 aa6.35□□□□□ -1.39
SPG11-211ENST00000558561 VTI1AQ96AJ9 217 aa6.35□□□□□ -1.39
SPG11-211ENST00000558561 SLC26A8Q96RN1 970 aa6.35□□□□□ -1.39
SPG11-211ENST00000558561 PHACTR1Q9C0D0 580 aa6.35□□□□□ -1.39
SPG11-211ENST00000558561 RUBCNLQ9H714 662 aa6.35□□□□□ -1.39
SPG11-211ENST00000558561 SEPT3Q9UH03 358 aa6.35□□□□□ -1.39
SPG11-211ENST00000558561 SYNMO15061 1565 aa6.35□□□□□ -1.39
SPG11-211ENST00000558561 SPATA31D1Q6ZQQ2 1576 aa6.35□□□□□ -1.39
SPG11-211ENST00000558561 NOS1P29475 1434 aa6.34□□□□□ -1.39
SPG11-211ENST00000558561 ARHGAP31Q2M1Z3 1444 aa6.34□□□□□ -1.39
SPG11-211ENST00000558561 KANK1Q14678 1352 aa6.34□□□□□ -1.39
SPG11-211ENST00000558561 E9PCH4 1651 aa6.34□□□□□ -1.39
SPG11-211ENST00000558561 TATP17735 454 aaPredicted RBP6.34□□□□□ -1.39
SPG11-211ENST00000558561 ITGA6P23229 1130 aa6.34□□□□□ -1.39
SPG11-211ENST00000558561 DBN1Q16643 649 aa6.34□□□□□ -1.39
SPG11-211ENST00000558561 ARSJQ5FYB0 599 aaPredicted RBP6.34□□□□□ -1.39
SPG11-211ENST00000558561 ZIC5Q96T25 663 aa6.34□□□□□ -1.39
SPG11-211ENST00000558561 TRAIPQ9BWF2 469 aa6.34□□□□□ -1.39
SPG11-211ENST00000558561 SAP130Q9H0E3 1048 aa6.34□□□□□ -1.39
SPG11-211ENST00000558561 ZDHHC3Q9NYG2 299 aa6.34□□□□□ -1.39
SPG11-211ENST00000558561 NXF1Q9UBU9 619 aaKnown RBP6.34□□□□□ -1.39
SPG11-211ENST00000558561 PIK3C2BO00750 1634 aa6.34□□□□□ -1.39
SPG11-211ENST00000558561 LTBP4Q8N2S1 1624 aa6.34□□□□□ -1.39
SPG11-211ENST00000558561 NEURL4Q96JN8 1562 aa6.34□□□□□ -1.39
SPG11-211ENST00000558561 STRCP1A6NGW2 1772 aa6.34□□□□□ -1.4
SPG11-211ENST00000558561 PTPRTO14522 1441 aa6.33□□□□□ -1.4
SPG11-211ENST00000558561 UBR1Q8IWV7 1749 aa6.33□□□□□ -1.4
SPG11-211ENST00000558561 THBS1P07996 1170 aa6.33□□□□□ -1.4
SPG11-211ENST00000558561 PDIA4P13667 645 aaKnown RBP6.33□□□□□ -1.4
SPG11-211ENST00000558561 C1orf53Q5VUE5 145 aa6.33□□□□□ -1.4
SPG11-211ENST00000558561 BICDL1Q6ZP65 573 aa6.33□□□□□ -1.4
SPG11-211ENST00000558561 HOMEZQ8IX15 550 aa6.33□□□□□ -1.4
SPG11-211ENST00000558561 C1orf216Q8TAB5 229 aa6.33□□□□□ -1.4
SPG11-211ENST00000558561 QTRT2Q9H974 415 aaKnown RBP6.33□□□□□ -1.4
SPG11-211ENST00000558561 LMTK2Q8IWU2 1503 aa6.33□□□□□ -1.4
SPG11-211ENST00000558561 PLA2R1Q13018 1463 aa6.33□□□□□ -1.4
SPG11-211ENST00000558561 ZNF142P52746 1687 aaPredicted RBP6.33□□□□□ -1.4
SPG11-211ENST00000558561 A0A1W2PNR3 127 aa6.32□□□□□ -1.4
SPG11-211ENST00000558561 COX20Q5RI15 118 aa6.32□□□□□ -1.4
SPG11-211ENST00000558561 PGBD3Q8N328 593 aa6.32□□□□□ -1.4
SPG11-211ENST00000558561 VWA5B2Q8N398 1253 aa6.32□□□□□ -1.4
SPG11-211ENST00000558561 RHPN1Q8TCX5 695 aa6.32□□□□□ -1.4
SPG11-211ENST00000558561 FBXO41Q8TF61 875 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms