RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 IBTKQ9P2D0 1353 aaPredicted RBP11.45□□□□□ -0.58
CHD8-210ENST00000555962 F6X3S4 739 aa11.45□□□□□ -0.58
CHD8-210ENST00000555962 PARP10Q53GL7 1025 aa11.45□□□□□ -0.58
CHD8-210ENST00000555962 NUTM1Q86Y26 1132 aa11.45□□□□□ -0.58
CHD8-210ENST00000555962 SMC4Q9NTJ3 1288 aa11.45□□□□□ -0.58
CHD8-210ENST00000555962 IGKV5-2P06315 115 aa11.44□□□□□ -0.58
CHD8-210ENST00000555962 DPEP1P16444 411 aa11.44□□□□□ -0.58
CHD8-210ENST00000555962 CHRNA5P30532 468 aa11.44□□□□□ -0.58
CHD8-210ENST00000555962 TRIM28Q13263 835 aaKnown RBP11.44□□□□□ -0.58
CHD8-210ENST00000555962 ERFEQ4G0M1 354 aa11.44□□□□□ -0.58
CHD8-210ENST00000555962 CHRDL2Q6WN34 429 aa11.44□□□□□ -0.58
CHD8-210ENST00000555962 TPTE2Q6XPS3 522 aa11.44□□□□□ -0.58
CHD8-210ENST00000555962 SYNE4Q8N205 404 aa11.44□□□□□ -0.58
CHD8-210ENST00000555962 DNAAF4Q8WXU2 420 aa11.44□□□□□ -0.58
CHD8-210ENST00000555962 SLX4Q8IY92 1834 aa11.44□□□□□ -0.58
CHD8-210ENST00000555962 A0A0G2JLW4 131 aa11.43□□□□□ -0.58
CHD8-210ENST00000555962 KCNA3P22001 575 aa11.43□□□□□ -0.58
CHD8-210ENST00000555962 BRPF1P55201 1214 aaPredicted RBP11.43□□□□□ -0.58
CHD8-210ENST00000555962 ST5P78524 1137 aa11.43□□□□□ -0.58
CHD8-210ENST00000555962 CWF19L2Q2TBE0 894 aaKnown RBP11.43□□□□□ -0.58
CHD8-210ENST00000555962 PPP1R42Q7Z4L9 355 aa11.43□□□□□ -0.58
CHD8-210ENST00000555962 MS4A4AQ96JQ5 239 aa11.43□□□□□ -0.58
CHD8-210ENST00000555962 UTP14AQ9BVJ6 771 aaKnown RBP11.43□□□□□ -0.58
CHD8-210ENST00000555962 BRIP1Q9BX63 1249 aa11.43□□□□□ -0.58
CHD8-210ENST00000555962 NYXQ9GZU5 481 aa11.43□□□□□ -0.58
CHD8-210ENST00000555962 NEURL1BA8MQ27 555 aa11.42□□□□□ -0.58
CHD8-210ENST00000555962 NPHP1O15259 732 aa11.42□□□□□ -0.58
CHD8-210ENST00000555962 BCAR3O75815 825 aa11.42□□□□□ -0.58
CHD8-210ENST00000555962 GTF2E1P29083 439 aaPredicted RBP11.42□□□□□ -0.58
CHD8-210ENST00000555962 TGFB2P61812 414 aa11.42□□□□□ -0.58
CHD8-210ENST00000555962 TRMT112Q9UI30 125 aaKnown RBP11.42□□□□□ -0.58
CHD8-210ENST00000555962 WWC3Q9ULE0 1092 aa11.42□□□□□ -0.58
CHD8-210ENST00000555962 CCDC88AQ3V6T2 1871 aa11.42□□□□□ -0.58
CHD8-210ENST00000555962 RIC1Q4ADV7 1423 aa11.42□□□□□ -0.58
CHD8-210ENST00000555962 PTPRCP08575 1304 aa11.41□□□□□ -0.58
CHD8-210ENST00000555962 NEXNQ0ZGT2 675 aa11.41□□□□□ -0.58
CHD8-210ENST00000555962 RTL5Q5HYW3 569 aaPredicted RBP11.41□□□□□ -0.58
CHD8-210ENST00000555962 SLC10A5Q5PT55 438 aa11.41□□□□□ -0.58
CHD8-210ENST00000555962 BEND3Q5T5X7 828 aa11.41□□□□□ -0.58
CHD8-210ENST00000555962 C3orf67Q6ZVT6 689 aa11.41□□□□□ -0.58
CHD8-210ENST00000555962 C2CD5Q86YS7 1000 aa11.41□□□□□ -0.58
CHD8-210ENST00000555962 CCDC191Q8NCU4 936 aa11.41□□□□□ -0.58
CHD8-210ENST00000555962 JARID2Q92833 1246 aaPredicted RBP11.41□□□□□ -0.58
CHD8-210ENST00000555962 FAM89AQ96GI7 184 aa11.41□□□□□ -0.58
CHD8-210ENST00000555962 PHF12Q96QT6 1004 aa11.41□□□□□ -0.58
CHD8-210ENST00000555962 CWC25Q9NXE8 425 aaPredicted RBP11.41□□□□□ -0.58
CHD8-210ENST00000555962 NOB1Q9ULX3 412 aaKnown RBP11.41□□□□□ -0.58
CHD8-210ENST00000555962 UTRNP46939 3433 aa11.41□□□□□ -0.58
CHD8-210ENST00000555962 CHD4Q14839 1912 aa11.41□□□□□ -0.58
CHD8-210ENST00000555962 RNF123Q5XPI4 1314 aa11.4□□□□□ -0.58
CHD8-210ENST00000555962 SH3TC1Q8TE82 1336 aa11.4□□□□□ -0.58
CHD8-210ENST00000555962 COL4A1P02462 1669 aa11.4□□□□□ -0.58
CHD8-210ENST00000555962 SPEF2Q9C093 1822 aa11.4□□□□□ -0.58
CHD8-210ENST00000555962 KLRG2A4D1S0 409 aaPredicted RBP11.4□□□□□ -0.58
CHD8-210ENST00000555962 HCLS1P14317 486 aaPredicted RBP11.4□□□□□ -0.58
CHD8-210ENST00000555962 CD44P16070 742 aaKnown RBP11.4□□□□□ -0.58
CHD8-210ENST00000555962 PDE6BP35913 854 aa11.4□□□□□ -0.58
CHD8-210ENST00000555962 MFSD10Q14728 455 aa11.4□□□□□ -0.58
CHD8-210ENST00000555962 SMYD5Q6GMV2 418 aa11.4□□□□□ -0.58
CHD8-210ENST00000555962 LINS1Q8NG48 757 aa11.4□□□□□ -0.58
CHD8-210ENST00000555962 TNNQ9UQP3 1299 aa11.4□□□□□ -0.58
CHD8-210ENST00000555962 H0YIN7 160 aa11.39□□□□□ -0.59
CHD8-210ENST00000555962 SBF1O95248 1867 aa11.39□□□□□ -0.59
CHD8-210ENST00000555962 PCCAP05165 728 aaPredicted RBP11.39□□□□□ -0.59
CHD8-210ENST00000555962 SRGNP10124 158 aa11.39□□□□□ -0.59
CHD8-210ENST00000555962 YBX3P16989 372 aaKnown RBP eCLIP11.39□□□□□ -0.592e-6■□□□□ 10.4
CHD8-210ENST00000555962 GCKRQ14397 625 aa11.39□□□□□ -0.59
CHD8-210ENST00000555962 FER1L6Q2WGJ9 1857 aa11.39□□□□□ -0.59
CHD8-210ENST00000555962 SLC4A10Q6U841 1118 aa11.39□□□□□ -0.59
CHD8-210ENST00000555962 ZBTB38Q8NAP3 1195 aaPredicted RBP11.39□□□□□ -0.59
CHD8-210ENST00000555962 CRISPLD2Q9H0B8 497 aa11.39□□□□□ -0.59
CHD8-210ENST00000555962 KIF16BQ96L93 1317 aa11.38□□□□□ -0.59
CHD8-210ENST00000555962 CRY2Q49AN0 593 aa11.38□□□□□ -0.59
CHD8-210ENST00000555962 PELP1Q8IZL8 1130 aaKnown RBP11.38□□□□□ -0.59
CHD8-210ENST00000555962 DDX27Q96GQ7 796 aaKnown RBP11.38□□□□□ -0.59
CHD8-210ENST00000555962 TMEM106CQ9BVX2 250 aa11.38□□□□□ -0.59
CHD8-210ENST00000555962 PIM2Q9P1W9 311 aa11.38□□□□□ -0.59
CHD8-210ENST00000555962 CDHR2Q9BYE9 1310 aa11.37□□□□□ -0.59
CHD8-210ENST00000555962 H7C1W4 665 aa11.37□□□□□ -0.59
CHD8-210ENST00000555962 IRS4O14654 1257 aaPredicted RBP11.37□□□□□ -0.59
CHD8-210ENST00000555962 CASP7P55210 303 aa11.37□□□□□ -0.59
CHD8-210ENST00000555962 UBE3BQ7Z3V4 1068 aa11.37□□□□□ -0.59
CHD8-210ENST00000555962 ARHGAP45Q92619 1136 aa11.37□□□□□ -0.59
CHD8-210ENST00000555962 FRAT1Q92837 279 aaPredicted RBP11.37□□□□□ -0.59
CHD8-210ENST00000555962 ZNF622Q969S3 477 aaKnown RBP eCLIP11.37□□□□□ -0.597e-7■■■□□ 15.8
CHD8-210ENST00000555962 NLRP3Q96P20 1036 aa11.37□□□□□ -0.59
CHD8-210ENST00000555962 API5Q9BZZ5 524 aaKnown RBP11.37□□□□□ -0.59
CHD8-210ENST00000555962 SRCIN1Q9C0H9 1055 aa11.37□□□□□ -0.59
CHD8-210ENST00000555962 SLC24A3Q9HC58 644 aa11.37□□□□□ -0.59
CHD8-210ENST00000555962 PDZRN3Q9UPQ7 1066 aa11.37□□□□□ -0.59
CHD8-210ENST00000555962 ALDH1L1O75891 902 aa11.36□□□□□ -0.59
CHD8-210ENST00000555962 TRIM27P14373 513 aa11.36□□□□□ -0.59
CHD8-210ENST00000555962 NPR1P16066 1061 aa11.36□□□□□ -0.59
CHD8-210ENST00000555962 GPR162Q16538 588 aa11.36□□□□□ -0.59
CHD8-210ENST00000555962 STYK1Q6J9G0 422 aa11.36□□□□□ -0.59
CHD8-210ENST00000555962 ATF7IPQ6VMQ6 1270 aa11.36□□□□□ -0.59
CHD8-210ENST00000555962 TTLL6Q8N841 843 aa11.36□□□□□ -0.59
CHD8-210ENST00000555962 MASTLQ96GX5 879 aa11.36□□□□□ -0.59
CHD8-210ENST00000555962 RCAN3Q9UKA8 241 aa11.36□□□□□ -0.59
CHD8-210ENST00000555962 BCS1LQ9Y276 419 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms