RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 SF3B2Q13435 895 aaKnown RBP5.76□□□□□ -1.49
SCFD1-213ENST00000554776 MTMR3Q13615 1198 aa5.76□□□□□ -1.49
SCFD1-213ENST00000554776 NOM1Q5C9Z4 860 aaKnown RBP5.76□□□□□ -1.49
SCFD1-213ENST00000554776 KRT25Q7Z3Z0 450 aa5.76□□□□□ -1.49
SCFD1-213ENST00000554776 TXNDC2Q86VQ3 553 aa5.76□□□□□ -1.49
SCFD1-213ENST00000554776 ATCAYQ86WG3 371 aa5.76□□□□□ -1.49
SCFD1-213ENST00000554776 GPR152Q8TDT2 470 aa5.76□□□□□ -1.49
SCFD1-213ENST00000554776 DNAJB12Q9NXW2 375 aaKnown RBP5.76□□□□□ -1.49
SCFD1-213ENST00000554776 EGFL7Q9UHF1 273 aa5.76□□□□□ -1.49
SCFD1-213ENST00000554776 MKL2Q9ULH7 1088 aa5.76□□□□□ -1.49
SCFD1-213ENST00000554776 SLC6A14Q9UN76 642 aa5.76□□□□□ -1.49
SCFD1-213ENST00000554776 STARD13Q9Y3M8 1113 aa5.76□□□□□ -1.49
SCFD1-213ENST00000554776 IRS1P35568 1242 aa5.75□□□□□ -1.49
SCFD1-213ENST00000554776 EIF1AXP47813 144 aaKnown RBP5.75□□□□□ -1.49
SCFD1-213ENST00000554776 DHX32Q7L7V1 743 aaKnown RBP5.75□□□□□ -1.49
SCFD1-213ENST00000554776 TRPM4Q8TD43 1214 aa5.75□□□□□ -1.49
SCFD1-213ENST00000554776 ZBTB42B2RXF5 422 aa5.74□□□□□ -1.49
SCFD1-213ENST00000554776 UBAP1LF5GYI3 381 aa5.74□□□□□ -1.49
SCFD1-213ENST00000554776 GNB5O14775 395 aa5.74□□□□□ -1.49
SCFD1-213ENST00000554776 FAM13AO94988 1023 aa5.74□□□□□ -1.49
SCFD1-213ENST00000554776 ABL1P00519 1130 aa5.74□□□□□ -1.49
SCFD1-213ENST00000554776 ALBP02768 609 aa5.74□□□□□ -1.49
SCFD1-213ENST00000554776 PDIA4P13667 645 aaKnown RBP5.74□□□□□ -1.49
SCFD1-213ENST00000554776 SERPINB4P48594 390 aa5.74□□□□□ -1.49
SCFD1-213ENST00000554776 FKBP4Q02790 459 aaKnown RBP eCLIP5.74□□□□□ -1.49
SCFD1-213ENST00000554776 RASSF7Q02833 373 aa5.74□□□□□ -1.49
SCFD1-213ENST00000554776 TBC1D8BQ0IIM8 1120 aa5.74□□□□□ -1.49
SCFD1-213ENST00000554776 TRIM26Q12899 539 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-213ENST00000554776 ZNF211Q13398 564 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-213ENST00000554776 PCSK7Q16549 785 aa5.74□□□□□ -1.49
SCFD1-213ENST00000554776 ALKBH2Q6NS38 261 aa5.74□□□□□ -1.49
SCFD1-213ENST00000554776 C20orf204Q6ZNR8 217 aa5.74□□□□□ -1.49
SCFD1-213ENST00000554776 NLRP13Q86W25 1043 aa5.74□□□□□ -1.49
SCFD1-213ENST00000554776 IGFLR1Q9H665 355 aa5.74□□□□□ -1.49
SCFD1-213ENST00000554776 PRDM6Q9NQX0 595 aa5.74□□□□□ -1.49
SCFD1-213ENST00000554776 TLR7Q9NYK1 1049 aaKnown RBP5.74□□□□□ -1.49
SCFD1-213ENST00000554776 GNEQ9Y223 722 aaKnown RBP5.74□□□□□ -1.49
SCFD1-213ENST00000554776 FNDC3AQ9Y2H6 1198 aaKnown RBP5.74□□□□□ -1.49
SCFD1-213ENST00000554776 M0R082 166 aa5.73□□□□□ -1.49
SCFD1-213ENST00000554776 PIK3R2O00459 728 aa5.73□□□□□ -1.49
SCFD1-213ENST00000554776 ICMTO60725 284 aa5.73□□□□□ -1.49
SCFD1-213ENST00000554776 MMP20O60882 483 aa5.73□□□□□ -1.49
SCFD1-213ENST00000554776 PDGFAP04085 211 aa5.73□□□□□ -1.49
SCFD1-213ENST00000554776 HOXD8P13378 290 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-213ENST00000554776 SOX18P35713 384 aa5.73□□□□□ -1.49
SCFD1-213ENST00000554776 NRLP54845 237 aa5.73□□□□□ -1.49
SCFD1-213ENST00000554776 GPLD1P80108 840 aa5.73□□□□□ -1.49
SCFD1-213ENST00000554776 MICALL1Q8N3F8 863 aa5.73□□□□□ -1.49
SCFD1-213ENST00000554776 ZNF417Q8TAU3 575 aa5.73□□□□□ -1.49
SCFD1-213ENST00000554776 EDEM1Q92611 657 aa5.73□□□□□ -1.49
SCFD1-213ENST00000554776 NUDT16Q96DE0 195 aaKnown RBP5.73□□□□□ -1.49
SCFD1-213ENST00000554776 ZNF587Q96SQ5 575 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-213ENST00000554776 ANO2Q9NQ90 1003 aa5.73□□□□□ -1.49
SCFD1-213ENST00000554776 NAGPAQ9UK23 515 aa5.73□□□□□ -1.49
SCFD1-213ENST00000554776 RPLP1P05386 114 aaKnown RBP5.72□□□□□ -1.49
SCFD1-213ENST00000554776 MZF1P28698 734 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-213ENST00000554776 KCNA1Q09470 495 aa5.72□□□□□ -1.49
SCFD1-213ENST00000554776 COL9A3Q14050 684 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-213ENST00000554776 FZD6O60353 706 aa5.71□□□□□ -1.5
SCFD1-213ENST00000554776 GDF11O95390 407 aa5.71□□□□□ -1.5
SCFD1-213ENST00000554776 PSAPP07602 524 aa5.71□□□□□ -1.5
SCFD1-213ENST00000554776 PLAURQ03405 335 aa5.71□□□□□ -1.5
SCFD1-213ENST00000554776 DNM1Q05193 864 aaKnown RBP5.71□□□□□ -1.5
SCFD1-213ENST00000554776 ECM1Q16610 540 aa5.71□□□□□ -1.5
SCFD1-213ENST00000554776 PDE12Q6L8Q7 609 aaKnown RBP5.71□□□□□ -1.5
SCFD1-213ENST00000554776 XKR5Q6UX68 686 aa5.71□□□□□ -1.5
SCFD1-213ENST00000554776 C8orf86Q6ZUL3 223 aa5.71□□□□□ -1.5
SCFD1-213ENST00000554776 FAM35AQ86V20 835 aa5.71□□□□□ -1.5
SCFD1-213ENST00000554776 TMEM151AQ8N4L1 468 aa5.71□□□□□ -1.5
SCFD1-213ENST00000554776 OR13H1Q8NG92 308 aa5.71□□□□□ -1.5
SCFD1-213ENST00000554776 CCER1Q8TC90 406 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-213ENST00000554776 TRIM11Q96F44 468 aa5.71□□□□□ -1.5
SCFD1-213ENST00000554776 SUV39H2Q9H5I1 410 aa5.71□□□□□ -1.5
SCFD1-213ENST00000554776 H3BRB1 525 aa5.7□□□□□ -1.5
SCFD1-213ENST00000554776 NID1P14543 1247 aa5.7□□□□□ -1.5
SCFD1-213ENST00000554776 CPB1P15086 417 aa5.7□□□□□ -1.5
SCFD1-213ENST00000554776 PCSK2P16519 638 aa5.7□□□□□ -1.5
SCFD1-213ENST00000554776 COL8A1P27658 744 aa5.7□□□□□ -1.5
SCFD1-213ENST00000554776 MLLT1Q03111 559 aaPredicted RBP5.7□□□□□ -1.5
SCFD1-213ENST00000554776 PERM1Q5SV97 790 aa5.7□□□□□ -1.5
SCFD1-213ENST00000554776 PSAPL1Q6NUJ1 521 aa5.7□□□□□ -1.5
SCFD1-213ENST00000554776 ALYREFQ86V81 257 aaKnown RBP5.7□□□□□ -1.5
SCFD1-213ENST00000554776 LPIN3Q9BQK8 851 aa5.7□□□□□ -1.5
SCFD1-213ENST00000554776 GGNBP2Q9H3C7 697 aa5.7□□□□□ -1.5
SCFD1-213ENST00000554776 TUT1Q9H6E5 874 aaKnown RBP5.7□□□□□ -1.5
SCFD1-213ENST00000554776 ELP3Q9H9T3 547 aa5.7□□□□□ -1.5
SCFD1-213ENST00000554776 PODXL2Q9NZ53 605 aa5.7□□□□□ -1.5
SCFD1-213ENST00000554776 NOP53Q9NZM5 478 aaKnown RBP5.7□□□□□ -1.5
SCFD1-213ENST00000554776 FRRS1LQ9P0K9 344 aa5.7□□□□□ -1.5
SCFD1-213ENST00000554776 TMEM63CQ9P1W3 806 aa5.7□□□□□ -1.5
SCFD1-213ENST00000554776 POLIQ9UNA4 740 aa5.7□□□□□ -1.5
SCFD1-213ENST00000554776 IVNS1ABPQ9Y6Y0 642 aa5.7□□□□□ -1.5
SCFD1-213ENST00000554776 LILRB5O75023 590 aa5.69□□□□□ -1.5
SCFD1-213ENST00000554776 ARHGAP4P98171 946 aa5.69□□□□□ -1.5
SCFD1-213ENST00000554776 ZNF438Q7Z4V0 828 aa5.69□□□□□ -1.5
SCFD1-213ENST00000554776 GLYCTKQ8IVS8 523 aa5.69□□□□□ -1.5
SCFD1-213ENST00000554776 NUDT8Q8WV74 236 aa5.69□□□□□ -1.5
SCFD1-213ENST00000554776 TTC9Q92623 222 aa5.69□□□□□ -1.5
SCFD1-213ENST00000554776 DCAF5Q96JK2 942 aa5.69□□□□□ -1.5
SCFD1-213ENST00000554776 PLVAPQ9BX97 442 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms