RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 HSH2DQ96JZ2 352 aa6.63□□□□□ -1.35
VTI1B-203ENST00000554636 PHACTR1Q9C0D0 580 aa6.63□□□□□ -1.35
VTI1B-203ENST00000554636 HCN2Q9UL51 889 aa6.63□□□□□ -1.35
VTI1B-203ENST00000554636 DIP2CQ9Y2E4 1556 aa6.63□□□□□ -1.35
VTI1B-203ENST00000554636 TRAPPC8Q9Y2L5 1435 aa6.63□□□□□ -1.35
VTI1B-203ENST00000554636 RIMS1Q86UR5 1692 aaKnown RBP6.62□□□□□ -1.35
VTI1B-203ENST00000554636 REREQ9P2R6 1566 aa6.62□□□□□ -1.35
VTI1B-203ENST00000554636 SYCP2Q9BX26 1530 aa6.62□□□□□ -1.35
VTI1B-203ENST00000554636 PTPRMP28827 1452 aa6.62□□□□□ -1.35
VTI1B-203ENST00000554636 MLH3Q9UHC1 1453 aa6.62□□□□□ -1.35
VTI1B-203ENST00000554636 VPS8Q8N3P4 1428 aa6.62□□□□□ -1.35
VTI1B-203ENST00000554636 MTUS2Q5JR59 1369 aa6.62□□□□□ -1.35
VTI1B-203ENST00000554636 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.62□□□□□ -1.35
VTI1B-203ENST00000554636 TNP2Q05952 138 aa6.62□□□□□ -1.35
VTI1B-203ENST00000554636 STRN4Q9NRL3 753 aa6.62□□□□□ -1.35
VTI1B-203ENST00000554636 ENAMQ9NRM1 1142 aa6.62□□□□□ -1.35
VTI1B-203ENST00000554636 KIDINS220Q9ULH0 1771 aa6.62□□□□□ -1.35
VTI1B-203ENST00000554636 ATP10AO60312 1499 aa6.61□□□□□ -1.35
VTI1B-203ENST00000554636 SHISA8B8ZZ34 492 aa6.61□□□□□ -1.35
VTI1B-203ENST00000554636 IRS1P35568 1242 aa6.61□□□□□ -1.35
VTI1B-203ENST00000554636 GALNT6Q8NCL4 622 aa6.61□□□□□ -1.35
VTI1B-203ENST00000554636 ARXQ96QS3 562 aa6.61□□□□□ -1.35
VTI1B-203ENST00000554636 GGA1Q9UJY5 639 aa6.61□□□□□ -1.35
VTI1B-203ENST00000554636 NOVA2Q9UNW9 492 aaKnown RBP6.61□□□□□ -1.35
VTI1B-203ENST00000554636 DNMT3AQ9Y6K1 912 aaPredicted RBP6.61□□□□□ -1.35
VTI1B-203ENST00000554636 KIAA1107Q9UPP5 1409 aa6.6□□□□□ -1.35
VTI1B-203ENST00000554636 FER1L4A9Z1Z3 1794 aa6.6□□□□□ -1.35
VTI1B-203ENST00000554636 SUPT6HQ7KZ85 1726 aaKnown RBP6.6□□□□□ -1.35
VTI1B-203ENST00000554636 NEURL1BA8MQ27 555 aa6.6□□□□□ -1.35
VTI1B-203ENST00000554636 OIP5O43482 229 aa6.6□□□□□ -1.35
VTI1B-203ENST00000554636 FAM157BP0CG42 384 aa6.6□□□□□ -1.35
VTI1B-203ENST00000554636 GRIN2CQ14957 1233 aa6.6□□□□□ -1.35
VTI1B-203ENST00000554636 C1orf229Q6ZS94 237 aaPredicted RBP6.6□□□□□ -1.35
VTI1B-203ENST00000554636 ALDH16A1Q8IZ83 802 aa6.6□□□□□ -1.35
VTI1B-203ENST00000554636 AFAP1Q8N556 730 aa6.6□□□□□ -1.35
VTI1B-203ENST00000554636 ZNF280CQ8ND82 737 aa6.6□□□□□ -1.35
VTI1B-203ENST00000554636 FAM200AQ8TCP9 573 aa6.6□□□□□ -1.35
VTI1B-203ENST00000554636 CCDC97Q96F63 343 aaPredicted RBP6.6□□□□□ -1.35
VTI1B-203ENST00000554636 C2orf49Q9BVC5 232 aaPredicted RBP6.6□□□□□ -1.35
VTI1B-203ENST00000554636 RRAGCQ9HB90 399 aa6.6□□□□□ -1.35
VTI1B-203ENST00000554636 PRR12Q9ULL5 1215 aa6.6□□□□□ -1.35
VTI1B-203ENST00000554636 INO80Q9ULG1 1556 aaPredicted RBP6.6□□□□□ -1.35
VTI1B-203ENST00000554636 NCOA2Q15596 1464 aa6.6□□□□□ -1.35
VTI1B-203ENST00000554636 PLEKHH2Q8IVE3 1493 aa6.6□□□□□ -1.35
VTI1B-203ENST00000554636 CCNB3Q8WWL7 1395 aa6.59□□□□□ -1.35
VTI1B-203ENST00000554636 ARID4BQ4LE39 1312 aaPredicted RBP6.59□□□□□ -1.35
VTI1B-203ENST00000554636 CNTNAP5Q8WYK1 1306 aa6.59□□□□□ -1.35
VTI1B-203ENST00000554636 RNF225M0QZC1 329 aaPredicted RBP6.59□□□□□ -1.35
VTI1B-203ENST00000554636 AMPD1P23109 780 aa6.59□□□□□ -1.35
VTI1B-203ENST00000554636 GOLGA6L1Q8N7Z2 621 aa6.59□□□□□ -1.35
VTI1B-203ENST00000554636 MARK1Q9P0L2 795 aa6.59□□□□□ -1.35
VTI1B-203ENST00000554636 GDF2Q9UK05 429 aaPredicted RBP6.59□□□□□ -1.35
VTI1B-203ENST00000554636 AGLP35573 1532 aa6.59□□□□□ -1.35
VTI1B-203ENST00000554636 MAP3K1Q13233 1512 aa6.59□□□□□ -1.35
VTI1B-203ENST00000554636 LRRC9Q6ZRR7 1453 aa6.59□□□□□ -1.36
VTI1B-203ENST00000554636 PLXNC1O60486 1568 aa6.58□□□□□ -1.36
VTI1B-203ENST00000554636 HIRAP54198 1017 aaPredicted RBP6.58□□□□□ -1.36
VTI1B-203ENST00000554636 PCBP4P57723 403 aaKnown RBP6.58□□□□□ -1.36
VTI1B-203ENST00000554636 SFSWAPQ12872 951 aaKnown RBP6.58□□□□□ -1.36
VTI1B-203ENST00000554636 SAMD5Q5TGI4 173 aa6.58□□□□□ -1.36
VTI1B-203ENST00000554636 RAB44Q7Z6P3 723 aaPredicted RBP6.58□□□□□ -1.36
VTI1B-203ENST00000554636 C14orf37Q86TY3 774 aa6.58□□□□□ -1.36
VTI1B-203ENST00000554636 STK32AQ8WU08 396 aa6.58□□□□□ -1.36
VTI1B-203ENST00000554636 C7orf43Q8WVR3 580 aa6.58□□□□□ -1.36
VTI1B-203ENST00000554636 EDARADDQ8WWZ3 215 aa6.58□□□□□ -1.36
VTI1B-203ENST00000554636 SCARF2Q96GP6 870 aaPredicted RBP6.58□□□□□ -1.36
VTI1B-203ENST00000554636 SUSD3Q96L08 255 aa6.58□□□□□ -1.36
VTI1B-203ENST00000554636 CEP63Q96MT8 703 aa6.58□□□□□ -1.36
VTI1B-203ENST00000554636 ZMIZ1Q9ULJ6 1067 aa6.58□□□□□ -1.36
VTI1B-203ENST00000554636 MBD5Q9P267 1494 aa6.58□□□□□ -1.36
VTI1B-203ENST00000554636 ATP7AQ04656 1500 aa6.57□□□□□ -1.36
VTI1B-203ENST00000554636 EFSO43281 561 aa6.57□□□□□ -1.36
VTI1B-203ENST00000554636 ARAFP10398 606 aa6.57□□□□□ -1.36
VTI1B-203ENST00000554636 RASSF7Q02833 373 aa6.57□□□□□ -1.36
VTI1B-203ENST00000554636 KCNMA1Q12791 1236 aa6.57□□□□□ -1.36
VTI1B-203ENST00000554636 C1orf53Q5VUE5 145 aa6.57□□□□□ -1.36
VTI1B-203ENST00000554636 SLCO4C1Q6ZQN7 724 aa6.57□□□□□ -1.36
VTI1B-203ENST00000554636 PODNQ7Z5L7 613 aa6.57□□□□□ -1.36
VTI1B-203ENST00000554636 PRIMPOLQ96LW4 560 aa6.57□□□□□ -1.36
VTI1B-203ENST00000554636 BRD7Q9NPI1 651 aa6.57□□□□□ -1.36
VTI1B-203ENST00000554636 CFDP1Q9UEE9 299 aaPredicted RBP6.57□□□□□ -1.36
VTI1B-203ENST00000554636 LMTK3Q96Q04 1460 aa6.57□□□□□ -1.36
VTI1B-203ENST00000554636 CAMSAP2Q08AD1 1489 aa6.56□□□□□ -1.36
VTI1B-203ENST00000554636 PRMT3O60678 531 aa6.56□□□□□ -1.36
VTI1B-203ENST00000554636 GDF11O95390 407 aa6.56□□□□□ -1.36
VTI1B-203ENST00000554636 IGFBP4P22692 258 aa6.56□□□□□ -1.36
VTI1B-203ENST00000554636 GSK3AP49840 483 aa6.56□□□□□ -1.36
VTI1B-203ENST00000554636 HNRNPMP52272 730 aaKnown RBP eCLIP6.56□□□□□ -1.36
VTI1B-203ENST00000554636 SNRPNP63162 240 aaKnown RBP6.56□□□□□ -1.36
VTI1B-203ENST00000554636 MLECQ14165 292 aa6.56□□□□□ -1.36
VTI1B-203ENST00000554636 POTEAQ6S8J7 498 aa6.56□□□□□ -1.36
VTI1B-203ENST00000554636 VTI1AQ96AJ9 217 aa6.56□□□□□ -1.36
VTI1B-203ENST00000554636 KLK14Q9P0G3 267 aa6.56□□□□□ -1.36
VTI1B-203ENST00000554636 ANKIB1Q9P2G1 1089 aa6.56□□□□□ -1.36
VTI1B-203ENST00000554636 KLF15Q9UIH9 416 aa6.56□□□□□ -1.36
VTI1B-203ENST00000554636 GPC6Q9Y625 555 aaPredicted RBP6.56□□□□□ -1.36
VTI1B-203ENST00000554636 SPAG9O60271 1321 aaKnown RBP6.55□□□□□ -1.36
VTI1B-203ENST00000554636 ZNF644Q9H582 1327 aaPredicted RBP6.55□□□□□ -1.36
VTI1B-203ENST00000554636 ADH6P28332 368 aa6.55□□□□□ -1.36
VTI1B-203ENST00000554636 TYRO3Q06418 890 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms