RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 CCNL1Q9UK58 526 aaPredicted RBP10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 ZNF330Q9Y3S2 320 aaPredicted RBP10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 COL15A1P39059 1388 aa10.18□□□□□ -0.78
DEPDC4-207ENST00000549249 MAP3K15Q6ZN16 1313 aa10.18□□□□□ -0.78
DEPDC4-207ENST00000549249 NEURL1BA8MQ27 555 aa10.18□□□□□ -0.78
DEPDC4-207ENST00000549249 HOXB1P14653 301 aaPredicted RBP10.18□□□□□ -0.78
DEPDC4-207ENST00000549249 EZH2Q15910 746 aaKnown RBP10.18□□□□□ -0.78
DEPDC4-207ENST00000549249 DOK7Q18PE1 504 aa10.18□□□□□ -0.78
DEPDC4-207ENST00000549249 SIRT2Q8IXJ6 389 aa10.18□□□□□ -0.78
DEPDC4-207ENST00000549249 CHMP4BQ9H444 224 aaKnown RBP10.18□□□□□ -0.78
DEPDC4-207ENST00000549249 UTYO14607 1347 aa10.17□□□□□ -0.78
DEPDC4-207ENST00000549249 NBPF7P0C2Y1 421 aaPredicted RBP10.17□□□□□ -0.78
DEPDC4-207ENST00000549249 HDAC1Q13547 482 aaPredicted RBP10.17□□□□□ -0.78
DEPDC4-207ENST00000549249 HLFQ16534 295 aa10.17□□□□□ -0.78
DEPDC4-207ENST00000549249 RC3H1Q5TC82 1133 aaKnown RBP10.17□□□□□ -0.78
DEPDC4-207ENST00000549249 CENPQQ7L2Z9 268 aaPredicted RBP10.17□□□□□ -0.78
DEPDC4-207ENST00000549249 AMIGO3Q86WK7 504 aa10.17□□□□□ -0.78
DEPDC4-207ENST00000549249 CAMKK2Q96RR4 588 aa10.17□□□□□ -0.78
DEPDC4-207ENST00000549249 ATP5J2-PTCD1G3V325 749 aa10.16□□□□□ -0.78
DEPDC4-207ENST00000549249 GNAI3P08754 354 aa10.16□□□□□ -0.78
DEPDC4-207ENST00000549249 NEXNQ0ZGT2 675 aa10.16□□□□□ -0.78
DEPDC4-207ENST00000549249 GCKRQ14397 625 aa10.16□□□□□ -0.78
DEPDC4-207ENST00000549249 CEP85Q6P2H3 762 aa10.16□□□□□ -0.78
DEPDC4-207ENST00000549249 GIGYF2Q6Y7W6 1299 aaKnown RBP10.16□□□□□ -0.78
DEPDC4-207ENST00000549249 KIF6Q6ZMV9 814 aa10.16□□□□□ -0.78
DEPDC4-207ENST00000549249 SMIM5Q71RC9 77 aa10.16□□□□□ -0.78
DEPDC4-207ENST00000549249 DZIP3Q86Y13 1208 aaKnown RBP10.16□□□□□ -0.78
DEPDC4-207ENST00000549249 ANKRD44Q8N8A2 993 aa10.16□□□□□ -0.78
DEPDC4-207ENST00000549249 ISCA1Q9BUE6 129 aa10.16□□□□□ -0.78
DEPDC4-207ENST00000549249 TBC1D2BQ9UPU7 963 aa10.16□□□□□ -0.78
DEPDC4-207ENST00000549249 MYH3P11055 1940 aa10.15□□□□□ -0.78
DEPDC4-207ENST00000549249 GRM8O00222 908 aa10.15□□□□□ -0.78
DEPDC4-207ENST00000549249 CAMTA2O94983 1202 aa10.15□□□□□ -0.78
DEPDC4-207ENST00000549249 GNAI2P04899 355 aa10.15□□□□□ -0.78
DEPDC4-207ENST00000549249 UBTFL1P0CB47 393 aaPredicted RBP10.15□□□□□ -0.78
DEPDC4-207ENST00000549249 CASP7P55210 303 aa10.15□□□□□ -0.78
DEPDC4-207ENST00000549249 TCIRG1Q13488 830 aa10.15□□□□□ -0.78
DEPDC4-207ENST00000549249 SLC27A3Q5K4L6 730 aa10.15□□□□□ -0.78
DEPDC4-207ENST00000549249 SKAP1Q86WV1 359 aa10.15□□□□□ -0.78
DEPDC4-207ENST00000549249 LRRFIP2Q9Y608 721 aaKnown RBP10.15□□□□□ -0.78
DEPDC4-207ENST00000549249 CASZ1Q86V15 1759 aa10.15□□□□□ -0.78
DEPDC4-207ENST00000549249 COL24A1Q17RW2 1714 aa10.15□□□□□ -0.78
DEPDC4-207ENST00000549249 ERVV-1B6SEH8 477 aa10.14□□□□□ -0.79
DEPDC4-207ENST00000549249 PLSCR1O15162 318 aa10.14□□□□□ -0.79
DEPDC4-207ENST00000549249 RPS6KA4O75676 772 aa10.14□□□□□ -0.79
DEPDC4-207ENST00000549249 TXNRD1Q16881 649 aa10.14□□□□□ -0.79
DEPDC4-207ENST00000549249 KAZALD1Q96I82 304 aa10.14□□□□□ -0.79
DEPDC4-207ENST00000549249 SUCLG2Q96I99 432 aa10.14□□□□□ -0.79
DEPDC4-207ENST00000549249 RWDD1Q9H446 243 aaPredicted RBP10.14□□□□□ -0.79
DEPDC4-207ENST00000549249 LAMB2P55268 1798 aa10.14□□□□□ -0.79
DEPDC4-207ENST00000549249 DDX60Q8IY21 1712 aaKnown RBP10.13□□□□□ -0.79
DEPDC4-207ENST00000549249 UBN2Q6ZU65 1347 aa10.13□□□□□ -0.79
DEPDC4-207ENST00000549249 PNMA6EA0A0J9YXQ4 647 aa10.13□□□□□ -0.79
DEPDC4-207ENST00000549249 GNPATO15228 680 aa10.13□□□□□ -0.79
DEPDC4-207ENST00000549249 ATP8B2P98198 1209 aa10.13□□□□□ -0.79
DEPDC4-207ENST00000549249 TRIM28Q13263 835 aaKnown RBP10.13□□□□□ -0.79
DEPDC4-207ENST00000549249 RPAP2Q8IXW5 612 aaPredicted RBP10.13□□□□□ -0.79
DEPDC4-207ENST00000549249 SMC5Q8IY18 1101 aa10.13□□□□□ -0.79
DEPDC4-207ENST00000549249 CCDC191Q8NCU4 936 aa10.13□□□□□ -0.79
DEPDC4-207ENST00000549249 JARID2Q92833 1246 aaPredicted RBP10.13□□□□□ -0.79
DEPDC4-207ENST00000549249 C9orf78Q9NZ63 289 aaPredicted RBP10.13□□□□□ -0.79
DEPDC4-207ENST00000549249 A0A087WZG4 1122 aa10.12□□□□□ -0.79
DEPDC4-207ENST00000549249 H7C1W4 665 aa10.12□□□□□ -0.79
DEPDC4-207ENST00000549249 RIMBP2O15034 1052 aa10.12□□□□□ -0.79
DEPDC4-207ENST00000549249 PPP1R37O75864 691 aa10.12□□□□□ -0.79
DEPDC4-207ENST00000549249 EPHA10Q5JZY3 1008 aa10.12□□□□□ -0.79
DEPDC4-207ENST00000549249 UBE3BQ7Z3V4 1068 aa10.12□□□□□ -0.79
DEPDC4-207ENST00000549249 NLRP10Q86W26 655 aa10.12□□□□□ -0.79
DEPDC4-207ENST00000549249 ZNF34Q8IZ26 560 aa10.12□□□□□ -0.79
DEPDC4-207ENST00000549249 ARXQ96QS3 562 aa10.12□□□□□ -0.79
DEPDC4-207ENST00000549249 BCL2L12Q9HB09 334 aa10.12□□□□□ -0.79
DEPDC4-207ENST00000549249 CWC25Q9NXE8 425 aaPredicted RBP10.12□□□□□ -0.79
DEPDC4-207ENST00000549249 QSER1Q2KHR3 1735 aa10.11□□□□□ -0.79
DEPDC4-207ENST00000549249 GPTP24298 496 aa10.11□□□□□ -0.79
DEPDC4-207ENST00000549249 MTX1Q13505 466 aa10.11□□□□□ -0.79
DEPDC4-207ENST00000549249 HSP90AB3PQ58FF7 597 aa10.11□□□□□ -0.79
DEPDC4-207ENST00000549249 AK7Q96M32 723 aa10.11□□□□□ -0.79
DEPDC4-207ENST00000549249 BICC1Q9H694 974 aaKnown RBP10.11□□□□□ -0.79
DEPDC4-207ENST00000549249 PPP1R1BQ9UD71 204 aaPredicted RBP10.11□□□□□ -0.79
DEPDC4-207ENST00000549249 SRP68Q9UHB9 627 aaKnown RBP10.11□□□□□ -0.79
DEPDC4-207ENST00000549249 PDZRN3Q9UPQ7 1066 aa10.11□□□□□ -0.79
DEPDC4-207ENST00000549249 RTCBQ9Y3I0 505 aaKnown RBP10.11□□□□□ -0.79
DEPDC4-207ENST00000549249 PHF14O94880 888 aa10.1□□□□□ -0.79
DEPDC4-207ENST00000549249 ZNF827Q17R98 1081 aa10.1□□□□□ -0.79
DEPDC4-207ENST00000549249 PPP1R42Q7Z4L9 355 aa10.1□□□□□ -0.79
DEPDC4-207ENST00000549249 NPM2Q86SE8 214 aaKnown RBP10.1□□□□□ -0.79
DEPDC4-207ENST00000549249 SSH3Q8TE77 659 aa10.1□□□□□ -0.79
DEPDC4-207ENST00000549249 ARHGEF1Q92888 912 aaKnown RBP10.1□□□□□ -0.79
DEPDC4-207ENST00000549249 DCTPP1Q9H773 170 aa10.1□□□□□ -0.79
DEPDC4-207ENST00000549249 SPON1Q9HCB6 807 aa10.1□□□□□ -0.79
DEPDC4-207ENST00000549249 NARFQ9UHQ1 456 aa10.1□□□□□ -0.79
DEPDC4-207ENST00000549249 USP42Q9H9J4 1324 aaKnown RBP10.09□□□□□ -0.79
DEPDC4-207ENST00000549249 PCCAP05165 728 aaPredicted RBP10.09□□□□□ -0.79
DEPDC4-207ENST00000549249 FOXO4P98177 505 aa10.09□□□□□ -0.79
DEPDC4-207ENST00000549249 RABL6Q3YEC7 729 aaPredicted RBP10.09□□□□□ -0.79
DEPDC4-207ENST00000549249 RTL5Q5HYW3 569 aaPredicted RBP10.09□□□□□ -0.79
DEPDC4-207ENST00000549249 SUSD4Q5VX71 490 aa10.09□□□□□ -0.79
DEPDC4-207ENST00000549249 USPL1Q5W0Q7 1092 aa10.09□□□□□ -0.79
DEPDC4-207ENST00000549249 CLEC4GQ6UXB4 293 aa10.09□□□□□ -0.79
DEPDC4-207ENST00000549249 SYNE4Q8N205 404 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms