RNA–Protein interactions for RNA: ENST00000540875.1

AC090023.2-201, humanhuman

TSL 3 BASIC

Gene AC090023.2, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090023.2-201ENST00000540875 PAXBP1Q9Y5B6 917 aa6.19□□□□□ -1.42
AC090023.2-201ENST00000540875 MRVI1Q9Y6F6 885 aa6.19□□□□□ -1.42
AC090023.2-201ENST00000540875 PCF11O94913 1555 aaKnown RBP6.18□□□□□ -1.42
AC090023.2-201ENST00000540875 SPATA31E1Q6ZUB1 1445 aa6.18□□□□□ -1.42
AC090023.2-201ENST00000540875 E9PCH4 1651 aa6.18□□□□□ -1.42
AC090023.2-201ENST00000540875 A0A1B0GUL7 405 aa6.18□□□□□ -1.42
AC090023.2-201ENST00000540875 ATP9BO43861 1147 aa6.18□□□□□ -1.42
AC090023.2-201ENST00000540875 SCTRP47872 440 aa6.18□□□□□ -1.42
AC090023.2-201ENST00000540875 SMCPP49901 116 aaPredicted RBP6.18□□□□□ -1.42
AC090023.2-201ENST00000540875 RAB3GAP1Q15042 981 aa6.18□□□□□ -1.42
AC090023.2-201ENST00000540875 GAS2L3Q86XJ1 694 aa6.18□□□□□ -1.42
AC090023.2-201ENST00000540875 CEP89Q96ST8 783 aa6.18□□□□□ -1.42
AC090023.2-201ENST00000540875 CTNNA3Q9UI47 895 aa6.18□□□□□ -1.42
AC090023.2-201ENST00000540875 V9GYY5 206 aaPredicted RBP6.18□□□□□ -1.42
AC090023.2-201ENST00000540875 PLXNC1O60486 1568 aa6.18□□□□□ -1.42
AC090023.2-201ENST00000540875 MTUS2Q5JR59 1369 aa6.18□□□□□ -1.42
AC090023.2-201ENST00000540875 ATAD2Q6PL18 1390 aa6.18□□□□□ -1.42
AC090023.2-201ENST00000540875 PTPRMP28827 1452 aa6.17□□□□□ -1.42
AC090023.2-201ENST00000540875 CAPN5O15484 640 aaPredicted RBP6.17□□□□□ -1.42
AC090023.2-201ENST00000540875 IGSF3O75054 1194 aa6.17□□□□□ -1.42
AC090023.2-201ENST00000540875 ERCC3P19447 782 aa6.17□□□□□ -1.42
AC090023.2-201ENST00000540875 HSPA2P54652 639 aa6.17□□□□□ -1.42
AC090023.2-201ENST00000540875 ERVK-9P63128 1117 aa6.17□□□□□ -1.42
AC090023.2-201ENST00000540875 CBLBQ13191 982 aa6.17□□□□□ -1.42
AC090023.2-201ENST00000540875 MTA1Q13330 715 aa6.17□□□□□ -1.42
AC090023.2-201ENST00000540875 CCDC184Q52MB2 194 aa6.17□□□□□ -1.42
AC090023.2-201ENST00000540875 LRCH2Q5VUJ6 765 aa6.17□□□□□ -1.42
AC090023.2-201ENST00000540875 CERS3Q8IU89 383 aa6.17□□□□□ -1.42
AC090023.2-201ENST00000540875 HSCBQ8IWL3 235 aa6.17□□□□□ -1.42
AC090023.2-201ENST00000540875 FAM184AQ8NB25 1140 aa6.17□□□□□ -1.42
AC090023.2-201ENST00000540875 HIRIP3Q9BW71 556 aaPredicted RBP6.17□□□□□ -1.42
AC090023.2-201ENST00000540875 CYLDQ9NQC7 956 aa6.17□□□□□ -1.42
AC090023.2-201ENST00000540875 SERPINA10Q9UK55 444 aa6.17□□□□□ -1.42
AC090023.2-201ENST00000540875 DOLKQ9UPQ8 538 aa6.17□□□□□ -1.42
AC090023.2-201ENST00000540875 PTPN23Q9H3S7 1636 aa6.17□□□□□ -1.42
AC090023.2-201ENST00000540875 KIF15Q9NS87 1388 aa6.17□□□□□ -1.42
AC090023.2-201ENST00000540875 RTEL1-TNFRSF6BF6WH68 1400 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 KIF27Q86VH2 1401 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 FYCO1Q9BQS8 1478 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 REREQ9P2R6 1566 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 USP17L5A8MUK1 530 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 LCE2BO14633 110 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 AXIN1O15169 862 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 LZTS3O60299 673 aaPredicted RBP6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 EIF3JO75822 258 aaKnown RBP6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 ATP2B1P20020 1258 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 LMOD1P29536 600 aaPredicted RBP6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 NUCB2P80303 420 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 USP4Q13107 963 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 GPS2Q13227 327 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 HDAC1Q13547 482 aaPredicted RBP6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 CTC1Q2NKJ3 1217 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 UVSSAQ2YD98 709 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 TEX35Q5T0J7 233 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 CFAP70Q5T0N1 1121 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 Q6ZVU0 165 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 ANKRD23Q86SG2 305 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 CRIPAKQ8N1N5 446 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 DEPDC4Q8N2C3 294 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 CCDC82Q8N4S0 544 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 RNF217Q8TC41 542 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 CXorf56Q9H5V9 222 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 AAASQ9NRG9 546 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 JRKLQ9Y4A0 524 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 MAFBQ9Y5Q3 323 aaPredicted RBP6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 GCC2Q8IWJ2 1684 aa6.16□□□□□ -1.42
AC090023.2-201ENST00000540875 CAMSAP2Q08AD1 1489 aa6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 LRRC9Q6ZRR7 1453 aa6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 RAPGEF2Q9Y4G8 1499 aa6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 RUSC2Q8N2Y8 1516 aa6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 ST8SIA5O15466 376 aa6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 U2AF2P26368 475 aaKnown RBP eCLIP6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 USP8P40818 1118 aa6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 IRX1P78414 480 aaPredicted RBP6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 SARNPP82979 210 aaKnown RBP6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 NCOA4Q13772 614 aa6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 NOLC1Q14978 699 aaKnown RBP eCLIP6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 OXLD1Q5BKU9 147 aa6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 Q6ZNB5 142 aa6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 TSHZ1Q6ZSZ6 1077 aa6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 PLEKHM2Q8IWE5 1019 aa6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 IQUBQ8NA54 791 aa6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 KDF1Q8NAX2 398 aaPredicted RBP6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 KIF18AQ8NI77 898 aa6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 CCDC97Q96F63 343 aaPredicted RBP6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 CRBNQ96SW2 442 aa6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 OSBPL3Q9H4L5 887 aa6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 PRDM16Q9HAZ2 1276 aa6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 DACH1Q9UI36 760 aa6.15□□□□□ -1.42
AC090023.2-201ENST00000540875 EPRSP07814 1512 aaKnown RBP6.15□□□□□ -1.43
AC090023.2-201ENST00000540875 GLI2P10070 1586 aa6.14□□□□□ -1.43
AC090023.2-201ENST00000540875 CCDC189A1A4V9 331 aa6.14□□□□□ -1.43
AC090023.2-201ENST00000540875 USP17L3A6NCW0 530 aa6.14□□□□□ -1.43
AC090023.2-201ENST00000540875 USP17L4A6NCW7 530 aa6.14□□□□□ -1.43
AC090023.2-201ENST00000540875 IPO7O95373 1038 aaKnown RBP6.14□□□□□ -1.43
AC090023.2-201ENST00000540875 RFX1P22670 979 aa6.14□□□□□ -1.43
AC090023.2-201ENST00000540875 USP17L2Q6R6M4 530 aa6.14□□□□□ -1.43
AC090023.2-201ENST00000540875 USP17L1Q7RTZ2 530 aa6.14□□□□□ -1.43
AC090023.2-201ENST00000540875 ZNF397Q8NF99 534 aaPredicted RBP6.14□□□□□ -1.43
AC090023.2-201ENST00000540875 ERCC4Q92889 916 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms