RNA–Protein interactions for RNA: ENST00000538923.1

MRE11-208, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 5

Gene MRE11, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-208ENST00000538923 CAMTA2O94983 1202 aa11.9□□□□□ -0.5
MRE11-208ENST00000538923 PSEN2P49810 448 aa11.9□□□□□ -0.5
MRE11-208ENST00000538923 ST5P78524 1137 aa11.9□□□□□ -0.5
MRE11-208ENST00000538923 CNGB1Q14028 1251 aaPredicted RBP11.9□□□□□ -0.5
MRE11-208ENST00000538923 ERFEQ4G0M1 354 aa11.9□□□□□ -0.5
MRE11-208ENST00000538923 COL13A1Q5TAT6 717 aaPredicted RBP11.9□□□□□ -0.5
MRE11-208ENST00000538923 SOGA3Q5TF21 947 aa11.9□□□□□ -0.5
MRE11-208ENST00000538923 STYK1Q6J9G0 422 aa11.9□□□□□ -0.5
MRE11-208ENST00000538923 POTEEQ6S8J3 1075 aa11.9□□□□□ -0.5
MRE11-208ENST00000538923 CFAP53Q96M91 514 aa11.9□□□□□ -0.5
MRE11-208ENST00000538923 PLSCR2Q9NRY7 297 aa11.9□□□□□ -0.5
MRE11-208ENST00000538923 DLEC1Q9Y238 1755 aa11.9□□□□□ -0.51
MRE11-208ENST00000538923 AFDNP55196 1824 aaKnown RBP11.89□□□□□ -0.51
MRE11-208ENST00000538923 POTECB2RU33 542 aa11.89□□□□□ -0.51
MRE11-208ENST00000538923 A1BGP04217 495 aa11.89□□□□□ -0.51
MRE11-208ENST00000538923 DZIP3Q86Y13 1208 aaKnown RBP11.89□□□□□ -0.51
MRE11-208ENST00000538923 CCDC24Q8N4L8 307 aa11.89□□□□□ -0.51
MRE11-208ENST00000538923 TAOK3Q9H2K8 898 aa11.89□□□□□ -0.51
MRE11-208ENST00000538923 SCN7AQ01118 1682 aa11.89□□□□□ -0.51
MRE11-208ENST00000538923 SRGNP10124 158 aa11.88□□□□□ -0.51
MRE11-208ENST00000538923 PRKAR2BP31323 418 aa11.88□□□□□ -0.51
MRE11-208ENST00000538923 PRPF40BQ6NWY9 871 aaKnown RBP11.88□□□□□ -0.51
MRE11-208ENST00000538923 CLEC4GQ6UXB4 293 aa11.88□□□□□ -0.51
MRE11-208ENST00000538923 MASTLQ96GX5 879 aa11.88□□□□□ -0.51
MRE11-208ENST00000538923 PHACTR3Q96KR7 559 aa11.88□□□□□ -0.51
MRE11-208ENST00000538923 RSPH6AQ9H0K4 717 aa11.88□□□□□ -0.51
MRE11-208ENST00000538923 CDHR5Q9HBB8 845 aa11.88□□□□□ -0.51
MRE11-208ENST00000538923 ZNF652Q9Y2D9 606 aa11.88□□□□□ -0.51
MRE11-208ENST00000538923 TIAM2Q8IVF5 1701 aa11.87□□□□□ -0.51
MRE11-208ENST00000538923 PPP1R3GB7ZBB8 358 aa11.87□□□□□ -0.51
MRE11-208ENST00000538923 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.87□□□□□ -0.51
MRE11-208ENST00000538923 NBPF5PQ86XG9 351 aaPredicted RBP11.87□□□□□ -0.51
MRE11-208ENST00000538923 RTF1Q92541 710 aaKnown RBP11.87□□□□□ -0.51
MRE11-208ENST00000538923 NUDCQ9Y266 331 aa11.87□□□□□ -0.51
MRE11-208ENST00000538923 SBF1O95248 1867 aa11.87□□□□□ -0.51
MRE11-208ENST00000538923 KCNQ3O43525 872 aa11.86□□□□□ -0.51
MRE11-208ENST00000538923 SNRPA1P09661 255 aaKnown RBP11.86□□□□□ -0.51
MRE11-208ENST00000538923 TNS4Q8IZW8 715 aa11.86□□□□□ -0.51
MRE11-208ENST00000538923 USP16Q9Y5T5 823 aa11.86□□□□□ -0.51
MRE11-208ENST00000538923 IQCA1LA6NCM1 817 aa11.85□□□□□ -0.51
MRE11-208ENST00000538923 DDNO94850 711 aaPredicted RBP11.85□□□□□ -0.51
MRE11-208ENST00000538923 HSPA1AP0DMV8 641 aaKnown RBP11.85□□□□□ -0.51
MRE11-208ENST00000538923 HSPA1BP0DMV9 641 aaKnown RBP11.85□□□□□ -0.51
MRE11-208ENST00000538923 COL9A1P20849 921 aa11.85□□□□□ -0.51
MRE11-208ENST00000538923 U2AF1L5P0DN76 240 aaPredicted RBP11.84□□□□□ -0.51
MRE11-208ENST00000538923 NPR1P16066 1061 aa11.84□□□□□ -0.51
MRE11-208ENST00000538923 PIP4K2AP48426 406 aaPredicted RBP11.84□□□□□ -0.51
MRE11-208ENST00000538923 LSM11P83369 360 aaKnown RBP eCLIP11.84□□□□□ -0.51
MRE11-208ENST00000538923 U2AF1Q01081 240 aaKnown RBP eCLIP11.84□□□□□ -0.512e-8■■■■■ 32.6
MRE11-208ENST00000538923 CCDC93Q567U6 631 aa11.84□□□□□ -0.51
MRE11-208ENST00000538923 DMRTA1Q5VZB9 504 aa11.84□□□□□ -0.51
MRE11-208ENST00000538923 TPTE2Q6XPS3 522 aa11.84□□□□□ -0.51
MRE11-208ENST00000538923 MCM10Q7L590 875 aa11.84□□□□□ -0.51
MRE11-208ENST00000538923 GPIHBP1Q8IV16 184 aa11.84□□□□□ -0.51
MRE11-208ENST00000538923 KRTAP3-3Q9BYR6 98 aa11.84□□□□□ -0.51
MRE11-208ENST00000538923 KRTAP3-2Q9BYR7 98 aa11.84□□□□□ -0.51
MRE11-208ENST00000538923 SIPA1L3O60292 1781 aaPredicted RBP11.84□□□□□ -0.51
MRE11-208ENST00000538923 COL11A2P13942 1736 aaPredicted RBP11.83□□□□□ -0.52
MRE11-208ENST00000538923 PRAMEF22A3QJZ6 481 aa11.83□□□□□ -0.52
MRE11-208ENST00000538923 KLRG2A4D1S0 409 aaPredicted RBP11.83□□□□□ -0.52
MRE11-208ENST00000538923 HTATSF1O43719 755 aaKnown RBP11.83□□□□□ -0.52
MRE11-208ENST00000538923 C7orf43Q8WVR3 580 aa11.83□□□□□ -0.52
MRE11-208ENST00000538923 ANKRD31Q8N7Z5 1873 aa11.83□□□□□ -0.52
MRE11-208ENST00000538923 VIRMAQ69YN4 1812 aaKnown RBP11.82□□□□□ -0.52
MRE11-208ENST00000538923 FKBP4Q02790 459 aaKnown RBP eCLIP11.82□□□□□ -0.52
MRE11-208ENST00000538923 ANKRD13DQ6ZTN6 518 aa11.82□□□□□ -0.52
MRE11-208ENST00000538923 NIP7Q9Y221 180 aaKnown RBP eCLIP11.82□□□□□ -0.52
MRE11-208ENST00000538923 PCNTO95613 3336 aa11.81□□□□□ -0.52
MRE11-208ENST00000538923 NBPF26B4DH59 902 aa11.81□□□□□ -0.52
MRE11-208ENST00000538923 PPP2R1AP30153 589 aa11.81□□□□□ -0.52
MRE11-208ENST00000538923 NBPF10Q6P3W6 841 aaKnown RBP11.81□□□□□ -0.52
MRE11-208ENST00000538923 LDHDQ86WU2 507 aa11.81□□□□□ -0.52
MRE11-208ENST00000538923 RTKN2Q8IZC4 609 aa11.81□□□□□ -0.52
MRE11-208ENST00000538923 NBPF15Q8N660 670 aa11.81□□□□□ -0.52
MRE11-208ENST00000538923 BCORQ6W2J9 1755 aa11.8□□□□□ -0.52
MRE11-208ENST00000538923 GTF2E1P29083 439 aaPredicted RBP11.8□□□□□ -0.52
MRE11-208ENST00000538923 ALDH1B1P30837 517 aa11.8□□□□□ -0.52
MRE11-208ENST00000538923 PTGDRQ13258 359 aa11.8□□□□□ -0.52
MRE11-208ENST00000538923 DCTN1Q14203 1278 aa11.8□□□□□ -0.52
MRE11-208ENST00000538923 TAF7Q15545 349 aaPredicted RBP11.8□□□□□ -0.52
MRE11-208ENST00000538923 TAF1DQ9H5J8 278 aaPredicted RBP11.8□□□□□ -0.52
MRE11-208ENST00000538923 MKRN1Q9UHC7 482 aaKnown RBP11.8□□□□□ -0.52
MRE11-208ENST00000538923 FER1L6Q2WGJ9 1857 aa11.79□□□□□ -0.52
MRE11-208ENST00000538923 FAM177BA6PVY3 158 aa11.79□□□□□ -0.52
MRE11-208ENST00000538923 NEFMP07197 916 aa11.79□□□□□ -0.52
MRE11-208ENST00000538923 PNISRQ8TF01 805 aaKnown RBP11.79□□□□□ -0.52
MRE11-208ENST00000538923 ZBED2Q9BTP6 218 aa11.79□□□□□ -0.52
MRE11-208ENST00000538923 NYXQ9GZU5 481 aa11.79□□□□□ -0.52
MRE11-208ENST00000538923 ZNF277Q9NRM2 450 aaPredicted RBP11.79□□□□□ -0.52
MRE11-208ENST00000538923 PASKQ96RG2 1323 aa11.79□□□□□ -0.52
MRE11-208ENST00000538923 CNTNAP1P78357 1384 aa11.79□□□□□ -0.52
MRE11-208ENST00000538923 ERVV-1B6SEH8 477 aa11.78□□□□□ -0.52
MRE11-208ENST00000538923 HLFQ16534 295 aa11.78□□□□□ -0.52
MRE11-208ENST00000538923 PNMA8AQ86V59 439 aaPredicted RBP11.78□□□□□ -0.52
MRE11-208ENST00000538923 NPDC1Q9NQX5 325 aaPredicted RBP11.78□□□□□ -0.52
MRE11-208ENST00000538923 HACL1Q9UJ83 578 aa11.78□□□□□ -0.52
MRE11-208ENST00000538923 ZNF541Q9H0D2 1346 aa11.78□□□□□ -0.52
MRE11-208ENST00000538923 SLX4Q8IY92 1834 aa11.77□□□□□ -0.52
MRE11-208ENST00000538923 TMEM88BA6NKF7 163 aa11.77□□□□□ -0.53
MRE11-208ENST00000538923 FZD9O00144 591 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 1458.5 ms