RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 MAPK8IP3Q9UPT6 1336 aa12.16□□□□□ -0.46
NEDD8-206ENST00000531430 HIRAP54198 1017 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-206ENST00000531430 NFE2L2Q16236 605 aa12.16□□□□□ -0.46
NEDD8-206ENST00000531430 SLC10A5Q5PT55 438 aa12.16□□□□□ -0.46
NEDD8-206ENST00000531430 VPS33BQ9H267 617 aa12.16□□□□□ -0.46
NEDD8-206ENST00000531430 TRMT112Q9UI30 125 aaKnown RBP12.16□□□□□ -0.46
NEDD8-206ENST00000531430 ZBTB12Q9Y330 459 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-206ENST00000531430 LTBP1Q14766 1721 aa12.16□□□□□ -0.46
NEDD8-206ENST00000531430 SHTN1A0MZ66 631 aa12.15□□□□□ -0.46
NEDD8-206ENST00000531430 CA12O43570 354 aa12.15□□□□□ -0.46
NEDD8-206ENST00000531430 HUNKP57058 714 aa12.15□□□□□ -0.46
NEDD8-206ENST00000531430 COPS6Q7L5N1 327 aa12.15□□□□□ -0.46
NEDD8-206ENST00000531430 TRPM4Q8TD43 1214 aa12.15□□□□□ -0.46
NEDD8-206ENST00000531430 ZIC5Q96T25 663 aa12.15□□□□□ -0.46
NEDD8-206ENST00000531430 PNNQ9H307 717 aaKnown RBP12.15□□□□□ -0.46
NEDD8-206ENST00000531430 CASP8AP2Q9UKL3 1982 aa12.15□□□□□ -0.46
NEDD8-206ENST00000531430 SNED1Q8TER0 1413 aa12.14□□□□□ -0.47
NEDD8-206ENST00000531430 C6orf229H3BNL8 230 aa12.14□□□□□ -0.47
NEDD8-206ENST00000531430 RGS19P49795 217 aa12.14□□□□□ -0.47
NEDD8-206ENST00000531430 TBC1D10BQ4KMP7 808 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-206ENST00000531430 SAMD7Q7Z3H4 446 aa12.14□□□□□ -0.47
NEDD8-206ENST00000531430 NSFL1CQ9UNZ2 370 aaKnown RBP12.14□□□□□ -0.47
NEDD8-206ENST00000531430 LAS1LQ9Y4W2 734 aaKnown RBP12.14□□□□□ -0.47
NEDD8-206ENST00000531430 TRPM7Q96QT4 1865 aa12.13□□□□□ -0.47
NEDD8-206ENST00000531430 G3V3G9 751 aa12.13□□□□□ -0.47
NEDD8-206ENST00000531430 BRPF1P55201 1214 aaPredicted RBP12.13□□□□□ -0.47
NEDD8-206ENST00000531430 RIPK4P57078 832 aa12.13□□□□□ -0.47
NEDD8-206ENST00000531430 KIAA2012Q0VF49 1180 aa12.13□□□□□ -0.47
NEDD8-206ENST00000531430 WASHC4Q2M389 1173 aa12.13□□□□□ -0.47
NEDD8-206ENST00000531430 PROSER3Q2NL68 480 aa12.13□□□□□ -0.47
NEDD8-206ENST00000531430 HSP90AB3PQ58FF7 597 aa12.13□□□□□ -0.47
NEDD8-206ENST00000531430 DCAF8Q5TAQ9 597 aa12.13□□□□□ -0.47
NEDD8-206ENST00000531430 MICALL2Q8IY33 904 aa12.13□□□□□ -0.47
NEDD8-206ENST00000531430 XAGE3Q8WTP9 111 aa12.13□□□□□ -0.47
NEDD8-206ENST00000531430 ZC3H15Q8WU90 426 aaKnown RBP12.13□□□□□ -0.47
NEDD8-206ENST00000531430 RTFDC1Q9BY42 306 aaPredicted RBP12.13□□□□□ -0.47
NEDD8-206ENST00000531430 ZNF157P51786 506 aaPredicted RBP12.12□□□□□ -0.47
NEDD8-206ENST00000531430 NOGQ13253 232 aa12.12□□□□□ -0.47
NEDD8-206ENST00000531430 GRAPQ13588 217 aa12.12□□□□□ -0.47
NEDD8-206ENST00000531430 PDIA6Q15084 440 aa12.12□□□□□ -0.47
NEDD8-206ENST00000531430 NEUROD2Q15784 382 aa12.12□□□□□ -0.47
NEDD8-206ENST00000531430 DOK7Q18PE1 504 aa12.12□□□□□ -0.47
NEDD8-206ENST00000531430 RTL5Q5HYW3 569 aaPredicted RBP12.12□□□□□ -0.47
NEDD8-206ENST00000531430 KRT26Q7Z3Y9 468 aa12.12□□□□□ -0.47
NEDD8-206ENST00000531430 NLRP10Q86W26 655 aa12.12□□□□□ -0.47
NEDD8-206ENST00000531430 C2orf69Q8N8R5 385 aa12.12□□□□□ -0.47
NEDD8-206ENST00000531430 GRAPLQ8TC17 118 aaPredicted RBP12.12□□□□□ -0.47
NEDD8-206ENST00000531430 DCPSQ96C86 337 aaKnown RBP12.12□□□□□ -0.47
NEDD8-206ENST00000531430 DBNDD1Q9H9R9 158 aa12.12□□□□□ -0.47
NEDD8-206ENST00000531430 PGAP2Q9UHJ9 254 aa12.12□□□□□ -0.47
NEDD8-206ENST00000531430 ERBB4Q15303 1308 aa12.11□□□□□ -0.47
NEDD8-206ENST00000531430 IBTKQ9P2D0 1353 aaPredicted RBP12.11□□□□□ -0.47
NEDD8-206ENST00000531430 YDJCA8MPS7 323 aa12.11□□□□□ -0.47
NEDD8-206ENST00000531430 PSMD14O00487 310 aa12.11□□□□□ -0.47
NEDD8-206ENST00000531430 KIF23Q02241 960 aaPredicted RBP12.11□□□□□ -0.47
NEDD8-206ENST00000531430 TCIRG1Q13488 830 aa12.11□□□□□ -0.47
NEDD8-206ENST00000531430 RGMBQ6NW40 437 aa12.11□□□□□ -0.47
NEDD8-206ENST00000531430 HHIPL1Q96JK4 782 aa12.11□□□□□ -0.47
NEDD8-206ENST00000531430 PLEKHF1Q96S99 279 aa12.11□□□□□ -0.47
NEDD8-206ENST00000531430 RIC1Q4ADV7 1423 aa12.11□□□□□ -0.47
NEDD8-206ENST00000531430 SH3TC1Q8TE82 1336 aa12.11□□□□□ -0.47
NEDD8-206ENST00000531430 TRPA1O75762 1119 aa12.1□□□□□ -0.47
NEDD8-206ENST00000531430 GBA2Q9HCG7 927 aaPredicted RBP12.1□□□□□ -0.47
NEDD8-206ENST00000531430 KCNQ5Q9NR82 932 aa12.1□□□□□ -0.47
NEDD8-206ENST00000531430 PCDH10Q9P2E7 1040 aa12.1□□□□□ -0.47
NEDD8-206ENST00000531430 ADM5C9JUS6 153 aa12.09□□□□□ -0.47
NEDD8-206ENST00000531430 ATP5J2-PTCD1G3V325 749 aa12.09□□□□□ -0.47
NEDD8-206ENST00000531430 SOX10P56693 466 aa12.09□□□□□ -0.47
NEDD8-206ENST00000531430 CCDC102AQ96A19 550 aa12.09□□□□□ -0.47
NEDD8-206ENST00000531430 FAM89AQ96GI7 184 aa12.09□□□□□ -0.47
NEDD8-206ENST00000531430 LAMB4A4D0S4 1761 aa12.08□□□□□ -0.48
NEDD8-206ENST00000531430 EGFRP00533 1210 aa12.08□□□□□ -0.48
NEDD8-206ENST00000531430 GPSM2P81274 684 aa12.08□□□□□ -0.48
NEDD8-206ENST00000531430 DPF2Q92785 391 aa12.08□□□□□ -0.48
NEDD8-206ENST00000531430 CELF1Q92879 486 aaKnown RBP12.08□□□□□ -0.48
NEDD8-206ENST00000531430 ZC3H12CQ9C0D7 883 aaKnown RBP12.08□□□□□ -0.48
NEDD8-206ENST00000531430 CDHR2Q9BYE9 1310 aa12.08□□□□□ -0.48
NEDD8-206ENST00000531430 DLG5Q8TDM6 1919 aa12.07□□□□□ -0.48
NEDD8-206ENST00000531430 ECE2O60344 883 aa12.07□□□□□ -0.48
NEDD8-206ENST00000531430 KRT24Q2M2I5 525 aa12.07□□□□□ -0.48
NEDD8-206ENST00000531430 TMC4Q7Z404 712 aa12.07□□□□□ -0.48
NEDD8-206ENST00000531430 LRP10Q7Z4F1 713 aa12.07□□□□□ -0.48
NEDD8-206ENST00000531430 SULF1Q8IWU6 871 aa12.07□□□□□ -0.48
NEDD8-206ENST00000531430 EYA3Q99504 573 aa12.07□□□□□ -0.48
NEDD8-206ENST00000531430 RNF186Q9NXI6 227 aa12.07□□□□□ -0.48
NEDD8-206ENST00000531430 KIF4BQ2VIQ3 1234 aa12.06□□□□□ -0.48
NEDD8-206ENST00000531430 ANKRD13DQ6ZTN6 518 aa12.06□□□□□ -0.48
NEDD8-206ENST00000531430 CHPF2Q9P2E5 772 aa12.06□□□□□ -0.48
NEDD8-206ENST00000531430 POLLQ9UGP5 575 aa12.06□□□□□ -0.48
NEDD8-206ENST00000531430 POLR2AP24928 1970 aaKnown RBP12.06□□□□□ -0.48
NEDD8-206ENST00000531430 TAF1P21675 1872 aa12.06□□□□□ -0.48
NEDD8-206ENST00000531430 KDM3BQ7LBC6 1761 aa12.05□□□□□ -0.48
NEDD8-206ENST00000531430 FAM155AB1AL88 458 aaPredicted RBP12.05□□□□□ -0.48
NEDD8-206ENST00000531430 TMPOP42166 694 aaKnown RBP12.05□□□□□ -0.48
NEDD8-206ENST00000531430 RPS8P62241 208 aaKnown RBP12.05□□□□□ -0.48
NEDD8-206ENST00000531430 CCDC146Q8IYE0 955 aa12.05□□□□□ -0.48
NEDD8-206ENST00000531430 CCDC85AQ96PX6 553 aaPredicted RBP12.05□□□□□ -0.48
NEDD8-206ENST00000531430 CSRNP1Q96S65 589 aa12.05□□□□□ -0.48
NEDD8-206ENST00000531430 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.05□□□□□ -0.48
NEDD8-206ENST00000531430 ANKIB1Q9P2G1 1089 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms