RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-208ENST00000530279 LPIN3Q9BQK8 851 aa6.68□□□□□ -1.34
C11orf54-208ENST00000530279 KDM4CQ9H3R0 1056 aa6.68□□□□□ -1.34
C11orf54-208ENST00000530279 NDUFB9Q9Y6M9 179 aa6.68□□□□□ -1.34
C11orf54-208ENST00000530279 DNMBPQ6XZF7 1577 aa6.68□□□□□ -1.34
C11orf54-208ENST00000530279 PNMA5Q96PV4 448 aa6.67□□□□□ -1.34
C11orf54-208ENST00000530279 DBX1A6NMT0 343 aa6.66□□□□□ -1.34
C11orf54-208ENST00000530279 EIF4G2P78344 907 aaKnown RBP eCLIP6.66□□□□□ -1.34
C11orf54-208ENST00000530279 MAP7D1Q3KQU3 841 aa6.66□□□□□ -1.34
C11orf54-208ENST00000530279 TTC9Q92623 222 aa6.66□□□□□ -1.34
C11orf54-208ENST00000530279 DBNDD2Q9BQY9 259 aa6.66□□□□□ -1.34
C11orf54-208ENST00000530279 SERTM1A2A2V5 107 aa6.65□□□□□ -1.34
C11orf54-208ENST00000530279 PLAURQ03405 335 aa6.65□□□□□ -1.34
C11orf54-208ENST00000530279 RNF43Q68DV7 783 aa6.65□□□□□ -1.34
C11orf54-208ENST00000530279 ELMSAN1Q6PJG2 1045 aa6.65□□□□□ -1.34
C11orf54-208ENST00000530279 UBL7Q96S82 380 aaPredicted RBP6.65□□□□□ -1.34
C11orf54-208ENST00000530279 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.65□□□□□ -1.34
C11orf54-208ENST00000530279 JUNBP17275 347 aaPredicted RBP6.64□□□□□ -1.35
C11orf54-208ENST00000530279 PERM1Q5SV97 790 aa6.64□□□□□ -1.35
C11orf54-208ENST00000530279 C1orf53Q5VUE5 145 aa6.64□□□□□ -1.35
C11orf54-208ENST00000530279 CBLL1Q75N03 491 aa6.64□□□□□ -1.35
C11orf54-208ENST00000530279 AGGF1Q8N302 714 aaeCLIP6.64□□□□□ -1.35
C11orf54-208ENST00000530279 ZNF280CQ8ND82 737 aa6.64□□□□□ -1.35
C11orf54-208ENST00000530279 IL27Q8NEV9 243 aa6.64□□□□□ -1.35
C11orf54-208ENST00000530279 GSX2Q9BZM3 304 aa6.64□□□□□ -1.35
C11orf54-208ENST00000530279 GPBP1L1Q9HC44 474 aaPredicted RBP6.64□□□□□ -1.35
C11orf54-208ENST00000530279 WDR97A6NE52 1622 aa6.64□□□□□ -1.35
C11orf54-208ENST00000530279 POLA1P09884 1462 aaPredicted RBP6.63□□□□□ -1.35
C11orf54-208ENST00000530279 NFKB1P19838 968 aa6.63□□□□□ -1.35
C11orf54-208ENST00000530279 SH3PXD2AQ5TCZ1 1133 aa6.63□□□□□ -1.35
C11orf54-208ENST00000530279 SLC9A9Q8IVB4 645 aa6.63□□□□□ -1.35
C11orf54-208ENST00000530279 TRIM42Q8IWZ5 723 aa6.63□□□□□ -1.35
C11orf54-208ENST00000530279 ARMC10Q8N2F6 343 aa6.63□□□□□ -1.35
C11orf54-208ENST00000530279 SUSD3Q96L08 255 aa6.63□□□□□ -1.35
C11orf54-208ENST00000530279 C7orf69Q9H7B7 122 aa6.63□□□□□ -1.35
C11orf54-208ENST00000530279 SOGA1O94964 1423 aa6.62□□□□□ -1.35
C11orf54-208ENST00000530279 TBCELQ5QJ74 424 aa6.62□□□□□ -1.35
C11orf54-208ENST00000530279 HOMEZQ8IX15 550 aa6.62□□□□□ -1.35
C11orf54-208ENST00000530279 PLPP7Q8NBV4 271 aa6.62□□□□□ -1.35
C11orf54-208ENST00000530279 DCAF11Q8TEB1 546 aa6.62□□□□□ -1.35
C11orf54-208ENST00000530279 ANGEL1Q9UNK9 670 aaKnown RBP6.62□□□□□ -1.35
C11orf54-208ENST00000530279 PCDHGA11Q9Y5H2 935 aa6.62□□□□□ -1.35
C11orf54-208ENST00000530279 WRNQ14191 1432 aaPredicted RBP eCLIP6.61□□□□□ -1.35
C11orf54-208ENST00000530279 HMX2A2RU54 273 aa6.61□□□□□ -1.35
C11orf54-208ENST00000530279 ITGB5P18084 799 aa6.61□□□□□ -1.35
C11orf54-208ENST00000530279 CCINQ13939 588 aa6.61□□□□□ -1.35
C11orf54-208ENST00000530279 ZNF124Q15973 351 aa6.61□□□□□ -1.35
C11orf54-208ENST00000530279 ZNF648Q5T619 568 aaPredicted RBP6.61□□□□□ -1.35
C11orf54-208ENST00000530279 PCMTD1Q96MG8 357 aaPredicted RBP6.61□□□□□ -1.35
C11orf54-208ENST00000530279 CUX1P39880 1505 aa6.6□□□□□ -1.35
C11orf54-208ENST00000530279 SHKBP1Q8TBC3 707 aa6.6□□□□□ -1.35
C11orf54-208ENST00000530279 SRA1Q9HD15 236 aaKnown RBP6.6□□□□□ -1.35
C11orf54-208ENST00000530279 GOPCQ9HD26 462 aa6.6□□□□□ -1.35
C11orf54-208ENST00000530279 HCN4Q9Y3Q4 1203 aa6.6□□□□□ -1.35
C11orf54-208ENST00000530279 TARBP1Q13395 1621 aaKnown RBP6.6□□□□□ -1.35
C11orf54-208ENST00000530279 FGD5Q6ZNL6 1462 aa6.6□□□□□ -1.35
C11orf54-208ENST00000530279 ZBTB42B2RXF5 422 aa6.59□□□□□ -1.35
C11orf54-208ENST00000530279 EPHA4P54764 986 aa6.59□□□□□ -1.35
C11orf54-208ENST00000530279 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.59□□□□□ -1.35
C11orf54-208ENST00000530279 BTLAQ7Z6A9 289 aa6.59□□□□□ -1.35
C11orf54-208ENST00000530279 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.59□□□□□ -1.35
C11orf54-208ENST00000530279 UTP4Q969X6 686 aaKnown RBP6.59□□□□□ -1.35
C11orf54-208ENST00000530279 CEP41Q9BYV8 373 aa6.59□□□□□ -1.35
C11orf54-208ENST00000530279 PHACTR1Q9C0D0 580 aa6.59□□□□□ -1.35
C11orf54-208ENST00000530279 ZNF358Q9NW07 568 aa6.59□□□□□ -1.35
C11orf54-208ENST00000530279 ABCA10Q8WWZ4 1543 aa6.59□□□□□ -1.35
C11orf54-208ENST00000530279 HOXA10P31260 410 aaPredicted RBP6.58□□□□□ -1.36
C11orf54-208ENST00000530279 FLIIQ13045 1269 aa6.58□□□□□ -1.36
C11orf54-208ENST00000530279 UVSSAQ2YD98 709 aa6.58□□□□□ -1.36
C11orf54-208ENST00000530279 MAP4K3Q8IVH8 894 aa6.58□□□□□ -1.36
C11orf54-208ENST00000530279 SMG9Q9H0W8 520 aaKnown RBP6.58□□□□□ -1.36
C11orf54-208ENST00000530279 ZNF608Q9ULD9 1512 aaPredicted RBP6.57□□□□□ -1.36
C11orf54-208ENST00000530279 APBB1O00213 710 aa6.57□□□□□ -1.36
C11orf54-208ENST00000530279 MAP3K6O95382 1288 aa6.57□□□□□ -1.36
C11orf54-208ENST00000530279 TRPM4Q8TD43 1214 aa6.57□□□□□ -1.36
C11orf54-208ENST00000530279 TOP2BQ02880 1626 aa6.57□□□□□ -1.36
C11orf54-208ENST00000530279 AQRO60306 1485 aaKnown RBP eCLIP6.56□□□□□ -1.36
C11orf54-208ENST00000530279 GRIN2BQ13224 1484 aa6.56□□□□□ -1.36
C11orf54-208ENST00000530279 MAGI1Q96QZ7 1491 aaPredicted RBP6.56□□□□□ -1.36
C11orf54-208ENST00000530279 ZNF865P0CJ78 1059 aaPredicted RBP6.56□□□□□ -1.36
C11orf54-208ENST00000530279 HIRAP54198 1017 aaPredicted RBP6.56□□□□□ -1.36
C11orf54-208ENST00000530279 TNS4Q8IZW8 715 aa6.56□□□□□ -1.36
C11orf54-208ENST00000530279 MTMR14Q8NCE2 650 aa6.56□□□□□ -1.36
C11orf54-208ENST00000530279 BANK1Q8NDB2 785 aa6.56□□□□□ -1.36
C11orf54-208ENST00000530279 FBXL18Q96ME1 805 aa6.56□□□□□ -1.36
C11orf54-208ENST00000530279 CHMP3Q9Y3E7 222 aa6.56□□□□□ -1.36
C11orf54-208ENST00000530279 TDRD9Q8NDG6 1382 aaKnown RBP6.56□□□□□ -1.36
C11orf54-208ENST00000530279 RAD54L2Q9Y4B4 1467 aa6.55□□□□□ -1.36
C11orf54-208ENST00000530279 PSMA6P60900 246 aaKnown RBP6.55□□□□□ -1.36
C11orf54-208ENST00000530279 MLLT1Q03111 559 aaPredicted RBP6.55□□□□□ -1.36
C11orf54-208ENST00000530279 SETDB1Q15047 1291 aa6.55□□□□□ -1.36
C11orf54-208ENST00000530279 DHX32Q7L7V1 743 aaKnown RBP6.55□□□□□ -1.36
C11orf54-208ENST00000530279 CLEC10AQ8IUN9 316 aa6.55□□□□□ -1.36
C11orf54-208ENST00000530279 TP53INP2Q8IXH6 220 aa6.55□□□□□ -1.36
C11orf54-208ENST00000530279 ZMYND15Q9H091 742 aa6.55□□□□□ -1.36
C11orf54-208ENST00000530279 CCDC39Q9UFE4 941 aa6.55□□□□□ -1.36
C11orf54-208ENST00000530279 BIVM-ERCC5R4GMW8 1640 aa6.54□□□□□ -1.36
C11orf54-208ENST00000530279 GAPVD1Q14C86 1478 aa6.54□□□□□ -1.36
C11orf54-208ENST00000530279 WDR64B1ANS9 1081 aa6.54□□□□□ -1.36
C11orf54-208ENST00000530279 GPLD1P80108 840 aa6.54□□□□□ -1.36
C11orf54-208ENST00000530279 HIF1AQ16665 826 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms