RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 CNBD1Q8NA66 436 aa17.89■□□□□ 0.45
NR1H3-231ENST00000529540 SUCLG2Q96I99 432 aa17.89■□□□□ 0.45
NR1H3-231ENST00000529540 C22orf23Q9BZE7 217 aa17.89■□□□□ 0.45
NR1H3-231ENST00000529540 C1orf115Q9H7X2 142 aa17.89■□□□□ 0.45
NR1H3-231ENST00000529540 RIC1Q4ADV7 1423 aa17.88■□□□□ 0.45
NR1H3-231ENST00000529540 ST5P78524 1137 aa17.88■□□□□ 0.45
NR1H3-231ENST00000529540 SMC5Q8IY18 1101 aa17.88■□□□□ 0.45
NR1H3-231ENST00000529540 PARP3Q9Y6F1 533 aa17.88■□□□□ 0.45
NR1H3-231ENST00000529540 ATP8B2P98198 1209 aa17.87■□□□□ 0.45
NR1H3-231ENST00000529540 SLC10A5Q5PT55 438 aa17.87■□□□□ 0.45
NR1H3-231ENST00000529540 BICC1Q9H694 974 aaKnown RBP17.87■□□□□ 0.45
NR1H3-231ENST00000529540 FAM177BA6PVY3 158 aa17.87■□□□□ 0.45
NR1H3-231ENST00000529540 POLRMTO00411 1230 aaKnown RBP17.87■□□□□ 0.45
NR1H3-231ENST00000529540 SERPINB2P05120 415 aa17.87■□□□□ 0.45
NR1H3-231ENST00000529540 LAMB2P55268 1798 aa17.86■□□□□ 0.45
NR1H3-231ENST00000529540 GOLGA6L3A6NEY3 463 aa17.85■□□□□ 0.45
NR1H3-231ENST00000529540 SRGAP3O43295 1099 aa17.85■□□□□ 0.45
NR1H3-231ENST00000529540 MMP10P09238 476 aa17.85■□□□□ 0.45
NR1H3-231ENST00000529540 CTSWP56202 376 aa17.85■□□□□ 0.45
NR1H3-231ENST00000529540 SSH3Q8TE77 659 aa17.85■□□□□ 0.45
NR1H3-231ENST00000529540 KAZALD1Q96I82 304 aa17.85■□□□□ 0.45
NR1H3-231ENST00000529540 FOXO4P98177 505 aa17.84■□□□□ 0.45
NR1H3-231ENST00000529540 ERFEQ4G0M1 354 aa17.84■□□□□ 0.45
NR1H3-231ENST00000529540 CCDC152Q4G0S7 254 aa17.84■□□□□ 0.45
NR1H3-231ENST00000529540 NUTM1Q86Y26 1132 aa17.84■□□□□ 0.45
NR1H3-231ENST00000529540 GCC1Q96CN9 775 aa17.84■□□□□ 0.45
NR1H3-231ENST00000529540 NLRP3Q96P20 1036 aa17.84■□□□□ 0.45
NR1H3-231ENST00000529540 MTFR1LQ9H019 292 aa17.84■□□□□ 0.45
NR1H3-231ENST00000529540 CSF1RP07333 972 aa17.83■□□□□ 0.45
NR1H3-231ENST00000529540 DDR1Q08345 913 aa17.83■□□□□ 0.45
NR1H3-231ENST00000529540 R3HDM1Q15032 1099 aaKnown RBP17.83■□□□□ 0.45
NR1H3-231ENST00000529540 HSP90AB4PQ58FF6 505 aa17.83■□□□□ 0.45
NR1H3-231ENST00000529540 PRR5LQ6MZQ0 368 aa17.83■□□□□ 0.45
NR1H3-231ENST00000529540 LMBR1LQ6UX01 489 aa17.83■□□□□ 0.45
NR1H3-231ENST00000529540 JARID2Q92833 1246 aaPredicted RBP17.83■□□□□ 0.45
NR1H3-231ENST00000529540 CASZ1Q86V15 1759 aa17.83■□□□□ 0.44
NR1H3-231ENST00000529540 RTL9Q8NET4 1388 aa17.83■□□□□ 0.44
NR1H3-231ENST00000529540 POLA2Q14181 598 aa17.83■□□□□ 0.44
NR1H3-231ENST00000529540 CCDC57Q2TAC2 916 aa17.83■□□□□ 0.44
NR1H3-231ENST00000529540 SNX21Q969T3 373 aa17.83■□□□□ 0.44
NR1H3-231ENST00000529540 RRAGDQ9NQL2 400 aaPredicted RBP17.83■□□□□ 0.44
NR1H3-231ENST00000529540 ISY1Q9ULR0 285 aaKnown RBP17.83■□□□□ 0.44
NR1H3-231ENST00000529540 NRXN2Q9P2S2 1712 aa17.82■□□□□ 0.44
NR1H3-231ENST00000529540 MYH3P11055 1940 aa17.82■□□□□ 0.44
NR1H3-231ENST00000529540 DDIT3P35638 169 aa17.82■□□□□ 0.44
NR1H3-231ENST00000529540 RBM25P49756 843 aaKnown RBP17.82■□□□□ 0.44
NR1H3-231ENST00000529540 SF3B3Q15393 1217 aaKnown RBP17.82■□□□□ 0.44
NR1H3-231ENST00000529540 MSL1Q68DK7 614 aa17.82■□□□□ 0.44
NR1H3-231ENST00000529540 HSCBQ8IWL3 235 aa17.82■□□□□ 0.44
NR1H3-231ENST00000529540 TTLL11Q8NHH1 800 aa17.82■□□□□ 0.44
NR1H3-231ENST00000529540 CHMP3Q9Y3E7 222 aa17.82■□□□□ 0.44
NR1H3-231ENST00000529540 DDX60Q8IY21 1712 aaKnown RBP17.81■□□□□ 0.44
NR1H3-231ENST00000529540 DDX11L8A8MPP1 907 aa17.81■□□□□ 0.44
NR1H3-231ENST00000529540 XRCC6P12956 609 aaKnown RBP eCLIP17.81■□□□□ 0.44
NR1H3-231ENST00000529540 HCLS1P14317 486 aaPredicted RBP17.81■□□□□ 0.44
NR1H3-231ENST00000529540 POLD1P28340 1107 aa17.81■□□□□ 0.44
NR1H3-231ENST00000529540 MFAP1P55081 439 aaKnown RBP17.81■□□□□ 0.44
NR1H3-231ENST00000529540 IFIT5Q13325 482 aaKnown RBP17.81■□□□□ 0.44
NR1H3-231ENST00000529540 EPHA10Q5JZY3 1008 aa17.81■□□□□ 0.44
NR1H3-231ENST00000529540 SIRT2Q8IXJ6 389 aa17.81■□□□□ 0.44
NR1H3-231ENST00000529540 FBXO3Q9UK99 471 aa17.81■□□□□ 0.44
NR1H3-231ENST00000529540 PNMA6EA0A0J9YXQ4 647 aa17.8■□□□□ 0.44
NR1H3-231ENST00000529540 BRIP1Q9BX63 1249 aa17.8■□□□□ 0.44
NR1H3-231ENST00000529540 ABCC12Q96J65 1359 aa17.8■□□□□ 0.44
NR1H3-231ENST00000529540 ANKRD18BA2A2Z9 1011 aa17.8■□□□□ 0.44
NR1H3-231ENST00000529540 SYNE4Q8N205 404 aa17.8■□□□□ 0.44
NR1H3-231ENST00000529540 DCTPP1Q9H773 170 aa17.8■□□□□ 0.44
NR1H3-231ENST00000529540 CIZ1Q9ULV3 898 aaPredicted RBP17.8■□□□□ 0.44
NR1H3-231ENST00000529540 TRAK2O60296 914 aa17.79■□□□□ 0.44
NR1H3-231ENST00000529540 PDE6BP35913 854 aa17.79■□□□□ 0.44
NR1H3-231ENST00000529540 NUCB1Q02818 461 aa17.79■□□□□ 0.44
NR1H3-231ENST00000529540 COPRSQ9NQ92 184 aa17.79■□□□□ 0.44
NR1H3-231ENST00000529540 RAB11FIP3O75154 756 aa17.78■□□□□ 0.44
NR1H3-231ENST00000529540 TAF7LQ5H9L4 462 aa17.78■□□□□ 0.44
NR1H3-231ENST00000529540 ERC1Q8IUD2 1116 aa17.78■□□□□ 0.44
NR1H3-231ENST00000529540 CDC5LQ99459 802 aaKnown RBP17.78■□□□□ 0.44
NR1H3-231ENST00000529540 ITGA6P23229 1130 aa17.77■□□□□ 0.44
NR1H3-231ENST00000529540 MRE11P49959 708 aa17.77■□□□□ 0.44
NR1H3-231ENST00000529540 PDGFDQ9GZP0 370 aaPredicted RBP17.77■□□□□ 0.44
NR1H3-231ENST00000529540 KLRG2A4D1S0 409 aaPredicted RBP17.77■□□□□ 0.43
NR1H3-231ENST00000529540 SURF6O75683 361 aaKnown RBP17.77■□□□□ 0.43
NR1H3-231ENST00000529540 GREM2Q9H772 168 aa17.77■□□□□ 0.43
NR1H3-231ENST00000529540 ZBTB7AO95365 584 aa17.76■□□□□ 0.43
NR1H3-231ENST00000529540 G3BP1Q13283 466 aaKnown RBP eCLIP17.76■□□□□ 0.43
NR1H3-231ENST00000529540 CRY2Q49AN0 593 aa17.76■□□□□ 0.43
NR1H3-231ENST00000529540 DDX46Q7L014 1031 aaKnown RBP17.76■□□□□ 0.43
NR1H3-231ENST00000529540 RPGRQ92834 1020 aaKnown RBP17.76■□□□□ 0.43
NR1H3-231ENST00000529540 CIAO1O76071 339 aa17.75■□□□□ 0.43
NR1H3-231ENST00000529540 PTMSP20962 102 aa17.75■□□□□ 0.43
NR1H3-231ENST00000529540 IGHMBP2P38935 993 aaKnown RBP17.75■□□□□ 0.43
NR1H3-231ENST00000529540 RFX5P48382 616 aaPredicted RBP17.75■□□□□ 0.43
NR1H3-231ENST00000529540 PTPN12Q05209 780 aaKnown RBP17.75■□□□□ 0.43
NR1H3-231ENST00000529540 OS9Q13438 667 aaPredicted RBP17.75■□□□□ 0.43
NR1H3-231ENST00000529540 UBE2Q2Q8WVN8 375 aa17.75■□□□□ 0.43
NR1H3-231ENST00000529540 PSDA5PKW4 1024 aaPredicted RBP17.74■□□□□ 0.43
NR1H3-231ENST00000529540 SOCS7O14512 581 aa17.74■□□□□ 0.43
NR1H3-231ENST00000529540 CLCN1P35523 988 aa17.74■□□□□ 0.43
NR1H3-231ENST00000529540 BMP2KLQ5H9B9 411 aa17.74■□□□□ 0.43
NR1H3-231ENST00000529540 KIF1BPQ96EK5 621 aa17.74■□□□□ 0.43
NR1H3-231ENST00000529540 RBM17Q96I25 401 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms