RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	IFNL2	Q8IZJ0	200 aa		27.82	■■■□□ 2.04
GSDMD-208	ENST00000528475	ZNF496	Q96IT1	587 aa	Predicted RBP	27.82	■■■□□ 2.04
GSDMD-208	ENST00000528475	PTPN12	Q05209	780 aa	Known RBP	27.82	■■■□□ 2.04
GSDMD-208	ENST00000528475	TNNI3K	Q59H18	835 aa		27.82	■■■□□ 2.04
GSDMD-208	ENST00000528475	FPGT-TNNI3K	V9GXZ4	949 aa		27.82	■■■□□ 2.04
GSDMD-208	ENST00000528475	MEGF6	O75095	1541 aa		27.81	■■■□□ 2.04
GSDMD-208	ENST00000528475	COL9A3	Q14050	684 aa	Predicted RBP	27.81	■■■□□ 2.04
GSDMD-208	ENST00000528475	SASS6	Q6UVJ0	657 aa		27.81	■■■□□ 2.04
GSDMD-208	ENST00000528475	CDC37L1	Q7L3B6	337 aa		27.81	■■■□□ 2.04
GSDMD-208	ENST00000528475	TTC6	Q86TZ1	520 aa		27.81	■■■□□ 2.04
GSDMD-208	ENST00000528475	PDCL3	Q9H2J4	239 aa		27.81	■■■□□ 2.04
GSDMD-208	ENST00000528475	DBNL	Q9UJU6	430 aa	Known RBP	27.81	■■■□□ 2.04
GSDMD-208	ENST00000528475	COL18A1	P39060	1754 aa		27.81	■■■□□ 2.04
GSDMD-208	ENST00000528475	ZC3H6	P61129	1189 aa	Known RBP	27.8	■■■□□ 2.04
GSDMD-208	ENST00000528475	GLIPR1L2	Q4G1C9	344 aa		27.8	■■■□□ 2.04
GSDMD-208	ENST00000528475	PIBF1	Q8WXW3	757 aa		27.8	■■■□□ 2.04
GSDMD-208	ENST00000528475	NLRP2	Q9NX02	1062 aa		27.8	■■■□□ 2.04
GSDMD-208	ENST00000528475	AFDN	P55196	1824 aa	Known RBP	27.8	■■■□□ 2.04
GSDMD-208	ENST00000528475	TAF6L	Q9Y6J9	622 aa		27.79	■■■□□ 2.04
GSDMD-208	ENST00000528475	HSPA2	P54652	639 aa		27.79	■■■□□ 2.04
GSDMD-208	ENST00000528475	ARFGEF2	Q9Y6D5	1785 aa		27.78	■■■□□ 2.04
GSDMD-208	ENST00000528475	CCDC192	P0DO97	292 aa		27.78	■■■□□ 2.04
GSDMD-208	ENST00000528475	DCAF5	Q96JK2	942 aa		27.78	■■■□□ 2.04
GSDMD-208	ENST00000528475	SCAND2P	Q9GZW5	306 aa	Predicted RBP	27.78	■■■□□ 2.04
GSDMD-208	ENST00000528475	UQCRHL	A0A096LP55	91 aa		27.77	■■■□□ 2.04
GSDMD-208	ENST00000528475	UQCRH	P07919	91 aa		27.77	■■■□□ 2.04
GSDMD-208	ENST00000528475	TFCP2	Q12800	502 aa		27.77	■■■□□ 2.04
GSDMD-208	ENST00000528475	USP16	Q9Y5T5	823 aa		27.77	■■■□□ 2.04
GSDMD-208	ENST00000528475		U3KPZ7	1027 aa	Predicted RBP	27.77	■■■□□ 2.04
GSDMD-208	ENST00000528475	PKD1L3	Q7Z443	1732 aa		27.77	■■■□□ 2.04
GSDMD-208	ENST00000528475	DTNB	O60941	627 aa		27.77	■■■□□ 2.04
GSDMD-208	ENST00000528475	TTC5	Q8N0Z6	440 aa		27.77	■■■□□ 2.04
GSDMD-208	ENST00000528475	FMNL2	Q96PY5	1086 aa		27.77	■■■□□ 2.04
GSDMD-208	ENST00000528475	TPRN	Q4KMQ1	711 aa		27.76	■■■□□ 2.03
GSDMD-208	ENST00000528475	DYNC1I1	O14576	645 aa		27.76	■■■□□ 2.03
GSDMD-208	ENST00000528475	EDC3	Q96F86	508 aa	Known RBP	27.76	■■■□□ 2.03
GSDMD-208	ENST00000528475	TCEANC2	Q96MN5	208 aa		27.76	■■■□□ 2.03
GSDMD-208	ENST00000528475	HAUS7	Q99871	368 aa		27.76	■■■□□ 2.03
GSDMD-208	ENST00000528475	LAMB4	A4D0S4	1761 aa		27.75	■■■□□ 2.03
GSDMD-208	ENST00000528475	NEK1	Q96PY6	1258 aa		27.75	■■■□□ 2.03
GSDMD-208	ENST00000528475	CASP7	P55210	303 aa		27.74	■■■□□ 2.03
GSDMD-208	ENST00000528475	TICAM2	Q86XR7	235 aa		27.74	■■■□□ 2.03
GSDMD-208	ENST00000528475	GTF3C6	Q969F1	213 aa		27.74	■■■□□ 2.03
GSDMD-208	ENST00000528475	TMEM94	Q12767	1356 aa		27.74	■■■□□ 2.03
GSDMD-208	ENST00000528475	ZNF609	O15014	1411 aa		27.74	■■■□□ 2.03
GSDMD-208	ENST00000528475	FERMT3	Q86UX7	667 aa		27.74	■■■□□ 2.03
GSDMD-208	ENST00000528475	MAP7D2	Q96T17	732 aa		27.74	■■■□□ 2.03
GSDMD-208	ENST00000528475	NUP62CL	Q9H1M0	184 aa		27.74	■■■□□ 2.03
GSDMD-208	ENST00000528475	GLI3	P10071	1580 aa		27.74	■■■□□ 2.03
GSDMD-208	ENST00000528475	KDM4F	A0A1W2PPD8	638 aa		27.73	■■■□□ 2.03
GSDMD-208	ENST00000528475	TPM3	P06753	285 aa		27.73	■■■□□ 2.03
GSDMD-208	ENST00000528475	MAP3K11	Q16584	847 aa		27.73	■■■□□ 2.03
GSDMD-208	ENST00000528475	UBE3B	Q7Z3V4	1068 aa		27.73	■■■□□ 2.03
GSDMD-208	ENST00000528475	PLBD2	Q8NHP8	589 aa		27.72	■■■□□ 2.03
GSDMD-208	ENST00000528475	MCMDC2	Q4G0Z9	681 aa		27.72	■■■□□ 2.03
GSDMD-208	ENST00000528475	SPTLC3	Q9NUV7	552 aa		27.72	■■■□□ 2.03
GSDMD-208	ENST00000528475	STRCP1	A6NGW2	1772 aa		27.72	■■■□□ 2.03
GSDMD-208	ENST00000528475	PARP4	Q9UKK3	1724 aa	Known RBP	27.71	■■■□□ 2.03
GSDMD-208	ENST00000528475	CYP27B1	O15528	508 aa		27.71	■■■□□ 2.03
GSDMD-208	ENST00000528475	ATF3	P18847	181 aa		27.71	■■■□□ 2.03
GSDMD-208	ENST00000528475	LIG1	P18858	919 aa		27.71	■■■□□ 2.03
GSDMD-208	ENST00000528475	NOLC1	Q14978	699 aa	Known RBP eCLIP	27.71	■■■□□ 2.03
GSDMD-208	ENST00000528475	FAM200A	Q8TCP9	573 aa		27.71	■■■□□ 2.03
GSDMD-208	ENST00000528475	DDX19A	Q9NUU7	478 aa	Known RBP	27.71	■■■□□ 2.03
GSDMD-208	ENST00000528475		A0A087WZG4	1122 aa		27.71	■■■□□ 2.03
GSDMD-208	ENST00000528475	RBM43	Q6ZSC3	357 aa	Known RBP	27.71	■■■□□ 2.03
GSDMD-208	ENST00000528475	SPATA32	Q96LK8	384 aa		27.71	■■■□□ 2.03
GSDMD-208	ENST00000528475	DBNDD2	Q9BQY9	259 aa		27.71	■■■□□ 2.03
GSDMD-208	ENST00000528475	SH3TC1	Q8TE82	1336 aa		27.7	■■■□□ 2.03
GSDMD-208	ENST00000528475	AP5Z1	O43299	807 aa		27.7	■■■□□ 2.02
GSDMD-208	ENST00000528475	FAM173B	Q6P4H8	233 aa		27.7	■■■□□ 2.02
GSDMD-208	ENST00000528475	LEO1	Q8WVC0	666 aa	Predicted RBP	27.7	■■■□□ 2.02
GSDMD-208	ENST00000528475	TTC12	Q9H892	705 aa	Predicted RBP	27.7	■■■□□ 2.02
GSDMD-208	ENST00000528475	PALLD	Q8WX93	1383 aa		27.7	■■■□□ 2.02
GSDMD-208	ENST00000528475	ZNF830	Q96NB3	372 aa	Predicted RBP	27.69	■■■□□ 2.02
GSDMD-208	ENST00000528475	KBTBD3	Q8NAB2	608 aa		27.69	■■■□□ 2.02
GSDMD-208	ENST00000528475	DCC	P43146	1447 aa		27.68	■■■□□ 2.02
GSDMD-208	ENST00000528475	STK3	Q13188	491 aa		27.68	■■■□□ 2.02
GSDMD-208	ENST00000528475	JARID2	Q92833	1246 aa	Predicted RBP	27.68	■■■□□ 2.02
GSDMD-208	ENST00000528475	PRIMPOL	Q96LW4	560 aa		27.68	■■■□□ 2.02
GSDMD-208	ENST00000528475	GPR108	Q9NPR9	543 aa		27.68	■■■□□ 2.02
GSDMD-208	ENST00000528475	MRVI1	Q9Y6F6	885 aa		27.68	■■■□□ 2.02
GSDMD-208	ENST00000528475	CYP21A2	P08686	494 aa		27.68	■■■□□ 2.02
GSDMD-208	ENST00000528475	TYRO3	Q06418	890 aa		27.68	■■■□□ 2.02
GSDMD-208	ENST00000528475	REST	Q13127	1097 aa		27.68	■■■□□ 2.02
GSDMD-208	ENST00000528475		Q6ZUG5	572 aa		27.67	■■■□□ 2.02
GSDMD-208	ENST00000528475	DNAJC2	Q99543	621 aa	Known RBP	27.67	■■■□□ 2.02
GSDMD-208	ENST00000528475	GOLGA6L4	A6NEF3	574 aa		27.66	■■■□□ 2.02
GSDMD-208	ENST00000528475		H7C1W4	665 aa		27.66	■■■□□ 2.02
GSDMD-208	ENST00000528475	HMGB1	P09429	215 aa	Known RBP	27.66	■■■□□ 2.02
GSDMD-208	ENST00000528475	CSB-PGBD3	P0DP91	1061 aa		27.66	■■■□□ 2.02
GSDMD-208	ENST00000528475	LLPH	Q9BRT6	129 aa	Known RBP	27.66	■■■□□ 2.02
GSDMD-208	ENST00000528475	TNMD	Q9H2S6	317 aa		27.66	■■■□□ 2.02
GSDMD-208	ENST00000528475	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	27.66	■■■□□ 2.02
GSDMD-208	ENST00000528475	SMARCC2	Q8TAQ2	1214 aa		27.66	■■■□□ 2.02
GSDMD-208	ENST00000528475	CLSTN2	Q9H4D0	955 aa		27.66	■■■□□ 2.02
GSDMD-208	ENST00000528475	DACT1	Q9NYF0	836 aa		27.66	■■■□□ 2.02
GSDMD-208	ENST00000528475	GOLGA6L6	A8MZA4	724 aa		27.65	■■■□□ 2.02
GSDMD-208	ENST00000528475	ATP5J2-PTCD1	G3V325	749 aa		27.65	■■■□□ 2.02
GSDMD-208	ENST00000528475	PTCD1	O75127	700 aa	Known RBP	27.65	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms