RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 ZNF385CQ66K41 422 aaPredicted RBP9.62□□□□□ -0.87
SQLE-203ENST00000518931 C1orf229Q6ZS94 237 aaPredicted RBP9.62□□□□□ -0.87
SQLE-203ENST00000518931 GALNT6Q8NCL4 622 aa9.62□□□□□ -0.87
SQLE-203ENST00000518931 TTC16Q8NEE8 873 aa9.62□□□□□ -0.87
SQLE-203ENST00000518931 GGNBP2Q9H3C7 697 aa9.62□□□□□ -0.87
SQLE-203ENST00000518931 ZFATQ9P243 1243 aa9.62□□□□□ -0.87
SQLE-203ENST00000518931 SIN3BO75182 1162 aa9.61□□□□□ -0.87
SQLE-203ENST00000518931 RPLP1P05386 114 aaKnown RBP9.61□□□□□ -0.87
SQLE-203ENST00000518931 RARAP10276 462 aa9.61□□□□□ -0.87
SQLE-203ENST00000518931 FCHSD1Q86WN1 690 aa9.61□□□□□ -0.87
SQLE-203ENST00000518931 SVOPQ8N4V2 548 aa9.61□□□□□ -0.87
SQLE-203ENST00000518931 EDARADDQ8WWZ3 215 aa9.61□□□□□ -0.87
SQLE-203ENST00000518931 BRPF3Q9ULD4 1205 aa9.61□□□□□ -0.87
SQLE-203ENST00000518931 NLRP13Q86W25 1043 aa9.6□□□□□ -0.87
SQLE-203ENST00000518931 A6NHS1 94 aa9.59□□□□□ -0.87
SQLE-203ENST00000518931 OIP5O43482 229 aa9.59□□□□□ -0.87
SQLE-203ENST00000518931 EPXP11678 715 aa9.59□□□□□ -0.87
SQLE-203ENST00000518931 MAP3K10Q02779 954 aa9.59□□□□□ -0.87
SQLE-203ENST00000518931 TBC1D8BQ0IIM8 1120 aa9.59□□□□□ -0.87
SQLE-203ENST00000518931 SLCO4C1Q6ZQN7 724 aa9.59□□□□□ -0.87
SQLE-203ENST00000518931 USP5P45974 858 aa9.58□□□□□ -0.88
SQLE-203ENST00000518931 UBE2OQ9C0C9 1292 aaKnown RBP9.58□□□□□ -0.88
SQLE-203ENST00000518931 NDUFB5O43674 189 aa9.57□□□□□ -0.88
SQLE-203ENST00000518931 MMP20O60882 483 aa9.57□□□□□ -0.88
SQLE-203ENST00000518931 MAP3K6O95382 1288 aa9.57□□□□□ -0.88
SQLE-203ENST00000518931 TTC39BQ5VTQ0 682 aaPredicted RBP9.57□□□□□ -0.88
SQLE-203ENST00000518931 PDE12Q6L8Q7 609 aaKnown RBP9.57□□□□□ -0.88
SQLE-203ENST00000518931 DHX32Q7L7V1 743 aaKnown RBP9.57□□□□□ -0.88
SQLE-203ENST00000518931 ZNF438Q7Z4V0 828 aa9.57□□□□□ -0.88
SQLE-203ENST00000518931 TNFRSF25Q93038 417 aa9.57□□□□□ -0.88
SQLE-203ENST00000518931 ELP3Q9H9T3 547 aa9.57□□□□□ -0.88
SQLE-203ENST00000518931 ENAMQ9NRM1 1142 aa9.57□□□□□ -0.88
SQLE-203ENST00000518931 LRRC4BQ9NT99 713 aa9.57□□□□□ -0.88
SQLE-203ENST00000518931 ELOA3CA0A087WX78 387 aaPredicted RBP9.56□□□□□ -0.88
SQLE-203ENST00000518931 ELOA3DA6NLF2 546 aaPredicted RBP9.56□□□□□ -0.88
SQLE-203ENST00000518931 ALAS2P22557 587 aa9.56□□□□□ -0.88
SQLE-203ENST00000518931 ELOA3BQ3SY89 546 aa9.56□□□□□ -0.88
SQLE-203ENST00000518931 XKR5Q6UX68 686 aa9.56□□□□□ -0.88
SQLE-203ENST00000518931 ELOA3Q8NG57 546 aa9.56□□□□□ -0.88
SQLE-203ENST00000518931 NEDD1Q8NHV4 660 aa9.56□□□□□ -0.88
SQLE-203ENST00000518931 GZF1Q9H116 711 aaPredicted RBP9.56□□□□□ -0.88
SQLE-203ENST00000518931 DNAJB12Q9NXW2 375 aaKnown RBP9.56□□□□□ -0.88
SQLE-203ENST00000518931 TLR7Q9NYK1 1049 aaKnown RBP9.56□□□□□ -0.88
SQLE-203ENST00000518931 ADARB2-AS1A8MUL3 147 aa9.55□□□□□ -0.88
SQLE-203ENST00000518931 SHISA8B8ZZ34 492 aa9.55□□□□□ -0.88
SQLE-203ENST00000518931 ARHGEF15O94989 841 aa9.55□□□□□ -0.88
SQLE-203ENST00000518931 EHHADHQ08426 723 aa9.55□□□□□ -0.88
SQLE-203ENST00000518931 GJD3Q8N144 294 aa9.55□□□□□ -0.88
SQLE-203ENST00000518931 TMC1Q8TDI8 760 aa9.55□□□□□ -0.88
SQLE-203ENST00000518931 BTBD6Q96KE9 485 aa9.55□□□□□ -0.88
SQLE-203ENST00000518931 TMEM63CQ9P1W3 806 aa9.55□□□□□ -0.88
SQLE-203ENST00000518931 PSAPP07602 524 aa9.54□□□□□ -0.88
SQLE-203ENST00000518931 AMPD1P23109 780 aa9.54□□□□□ -0.88
SQLE-203ENST00000518931 ADH7P40394 386 aa9.54□□□□□ -0.88
SQLE-203ENST00000518931 MDFIQ99750 246 aa9.54□□□□□ -0.88
SQLE-203ENST00000518931 ABI2Q9NYB9 513 aaPredicted RBP9.54□□□□□ -0.88
SQLE-203ENST00000518931 ZBTB42B2RXF5 422 aa9.53□□□□□ -0.88
SQLE-203ENST00000518931 MLLT1Q03111 559 aaPredicted RBP9.53□□□□□ -0.88
SQLE-203ENST00000518931 TRIM26Q12899 539 aaPredicted RBP9.53□□□□□ -0.88
SQLE-203ENST00000518931 CITED4Q96RK1 184 aa9.53□□□□□ -0.88
SQLE-203ENST00000518931 DCTN4Q9UJW0 460 aa9.53□□□□□ -0.88
SQLE-203ENST00000518931 ZBTB7CA1YPR0 619 aa9.52□□□□□ -0.89
SQLE-203ENST00000518931 MAPK1P28482 360 aa9.52□□□□□ -0.89
SQLE-203ENST00000518931 PLAURQ03405 335 aa9.52□□□□□ -0.89
SQLE-203ENST00000518931 PCSK7Q16549 785 aa9.52□□□□□ -0.89
SQLE-203ENST00000518931 HFE2Q6ZVN8 426 aa9.52□□□□□ -0.89
SQLE-203ENST00000518931 OR13H1Q8NG92 308 aa9.52□□□□□ -0.89
SQLE-203ENST00000518931 TRPM4Q8TD43 1214 aa9.52□□□□□ -0.89
SQLE-203ENST00000518931 CNTN3Q9P232 1028 aa9.52□□□□□ -0.89
SQLE-203ENST00000518931 SLC6A14Q9UN76 642 aa9.52□□□□□ -0.89
SQLE-203ENST00000518931 NRLP54845 237 aa9.51□□□□□ -0.89
SQLE-203ENST00000518931 PDE3BQ13370 1112 aa9.51□□□□□ -0.89
SQLE-203ENST00000518931 SND1Q7KZF4 910 aaKnown RBP eCLIP9.51□□□□□ -0.893e-7■■■□□ 15.7
SQLE-203ENST00000518931 C1orf127Q8N9H9 656 aa9.51□□□□□ -0.89
SQLE-203ENST00000518931 RBCK1Q9BYM8 510 aa9.51□□□□□ -0.89
SQLE-203ENST00000518931 ADAMTS8Q9UP79 889 aa9.51□□□□□ -0.89
SQLE-203ENST00000518931 LOC102724428A0A0B4J2F2 783 aa9.5□□□□□ -0.89
SQLE-203ENST00000518931 J3QW42 95 aa9.5□□□□□ -0.89
SQLE-203ENST00000518931 TNFRSF21O75509 655 aa9.5□□□□□ -0.89
SQLE-203ENST00000518931 CYP2E1P05181 493 aaPredicted RBP9.5□□□□□ -0.89
SQLE-203ENST00000518931 SIK1P57059 783 aa9.5□□□□□ -0.89
SQLE-203ENST00000518931 CHSY3Q70JA7 882 aa9.5□□□□□ -0.89
SQLE-203ENST00000518931 FAM35AQ86V20 835 aa9.5□□□□□ -0.89
SQLE-203ENST00000518931 NSUN5Q96P11 429 aaKnown RBP9.5□□□□□ -0.89
SQLE-203ENST00000518931 RRAGCQ9HB90 399 aa9.5□□□□□ -0.89
SQLE-203ENST00000518931 CPB1P15086 417 aa9.49□□□□□ -0.89
SQLE-203ENST00000518931 SOX18P35713 384 aa9.49□□□□□ -0.89
SQLE-203ENST00000518931 MARSP56192 900 aaKnown RBP9.49□□□□□ -0.89
SQLE-203ENST00000518931 GPLD1P80108 840 aa9.49□□□□□ -0.89
SQLE-203ENST00000518931 FAM129BQ96TA1 746 aa9.49□□□□□ -0.89
SQLE-203ENST00000518931 FOXD3Q9UJU5 478 aaPredicted RBP9.49□□□□□ -0.89
SQLE-203ENST00000518931 STARD13Q9Y3M8 1113 aa9.49□□□□□ -0.89
SQLE-203ENST00000518931 FAM181BA6NEQ2 426 aa9.48□□□□□ -0.89
SQLE-203ENST00000518931 PHF20L1A8MW92 1017 aa9.48□□□□□ -0.89
SQLE-203ENST00000518931 CES1P23141 567 aa9.48□□□□□ -0.89
SQLE-203ENST00000518931 COL13A1Q5TAT6 717 aaPredicted RBP9.48□□□□□ -0.89
SQLE-203ENST00000518931 NIF3L1Q9GZT8 377 aa9.48□□□□□ -0.89
SQLE-203ENST00000518931 PHACTR2O75167 634 aa9.47□□□□□ -0.89
SQLE-203ENST00000518931 HYAL2Q12891 473 aa9.47□□□□□ -0.89
SQLE-203ENST00000518931 TMC7Q7Z402 723 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms