RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 ZBTB3Q9H5J0 574 aa13.14□□□□□ -0.31
BRD9-216ENST00000518251 CREBZFQ9NS37 354 aa13.14□□□□□ -0.31
BRD9-216ENST00000518251 CNTNAP1P78357 1384 aa13.13□□□□□ -0.31
BRD9-216ENST00000518251 NEURL1BA8MQ27 555 aa13.13□□□□□ -0.31
BRD9-216ENST00000518251 IGKV5-2P06315 115 aa13.13□□□□□ -0.31
BRD9-216ENST00000518251 CEP85Q6P2H3 762 aa13.13□□□□□ -0.31
BRD9-216ENST00000518251 NPM2Q86SE8 214 aaKnown RBP13.13□□□□□ -0.31
BRD9-216ENST00000518251 CCDC24Q8N4L8 307 aa13.13□□□□□ -0.31
BRD9-216ENST00000518251 ANKRD44Q8N8A2 993 aa13.13□□□□□ -0.31
BRD9-216ENST00000518251 BRIP1Q9BX63 1249 aa13.13□□□□□ -0.31
BRD9-216ENST00000518251 DICER1Q9UPY3 1922 aaKnown RBP13.13□□□□□ -0.31
BRD9-216ENST00000518251 MAP3K15Q6ZN16 1313 aa13.13□□□□□ -0.31
BRD9-216ENST00000518251 A0A087WZG4 1122 aa13.12□□□□□ -0.31
BRD9-216ENST00000518251 PDE6BP35913 854 aa13.12□□□□□ -0.31
BRD9-216ENST00000518251 CHADLQ6NUI6 762 aa13.12□□□□□ -0.31
BRD9-216ENST00000518251 PRPF40BQ6NWY9 871 aaKnown RBP13.12□□□□□ -0.31
BRD9-216ENST00000518251 ZNF622Q969S3 477 aaKnown RBP eCLIP13.12□□□□□ -0.312e-10■□□□□ 9.9
BRD9-216ENST00000518251 C9orf78Q9NZ63 289 aaPredicted RBP13.12□□□□□ -0.31
BRD9-216ENST00000518251 ZNF219Q9P2Y4 722 aaPredicted RBP13.12□□□□□ -0.31
BRD9-216ENST00000518251 MKRN1Q9UHC7 482 aaKnown RBP13.12□□□□□ -0.31
BRD9-216ENST00000518251 PDZRN3Q9UPQ7 1066 aa13.12□□□□□ -0.31
BRD9-216ENST00000518251 HDAC5Q9UQL6 1122 aa13.12□□□□□ -0.31
BRD9-216ENST00000518251 LRRFIP2Q9Y608 721 aaKnown RBP13.12□□□□□ -0.31
BRD9-216ENST00000518251 UTYO14607 1347 aa13.12□□□□□ -0.31
BRD9-216ENST00000518251 PASKQ96RG2 1323 aa13.12□□□□□ -0.31
BRD9-216ENST00000518251 GRM8O00222 908 aa13.11□□□□□ -0.31
BRD9-216ENST00000518251 HMMRO75330 724 aa13.11□□□□□ -0.31
BRD9-216ENST00000518251 CAMTA2O94983 1202 aa13.11□□□□□ -0.31
BRD9-216ENST00000518251 NBPF7P0C2Y1 421 aaPredicted RBP13.11□□□□□ -0.31
BRD9-216ENST00000518251 GCKRQ14397 625 aa13.11□□□□□ -0.31
BRD9-216ENST00000518251 DPY19L2Q6NUT2 758 aa13.11□□□□□ -0.31
BRD9-216ENST00000518251 DZIP3Q86Y13 1208 aaKnown RBP13.11□□□□□ -0.31
BRD9-216ENST00000518251 SIRT2Q8IXJ6 389 aa13.11□□□□□ -0.31
BRD9-216ENST00000518251 CNBD1Q8NA66 436 aa13.11□□□□□ -0.31
BRD9-216ENST00000518251 CACNA1SQ13698 1873 aa13.1□□□□□ -0.31
BRD9-216ENST00000518251 CCDC88AQ3V6T2 1871 aa13.1□□□□□ -0.31
BRD9-216ENST00000518251 THSD7BQ9C0I4 1608 aa13.1□□□□□ -0.31
BRD9-216ENST00000518251 DDNO94850 711 aaPredicted RBP13.1□□□□□ -0.31
BRD9-216ENST00000518251 HSP90AB3PQ58FF7 597 aa13.1□□□□□ -0.31
BRD9-216ENST00000518251 SMC5Q8IY18 1101 aa13.1□□□□□ -0.31
BRD9-216ENST00000518251 GCC1Q96CN9 775 aa13.1□□□□□ -0.31
BRD9-216ENST00000518251 L3MBTL3Q96JM7 780 aaPredicted RBP13.1□□□□□ -0.31
BRD9-216ENST00000518251 TBC1D2BQ9UPU7 963 aa13.1□□□□□ -0.31
BRD9-216ENST00000518251 NUP98P52948 1817 aa13.1□□□□□ -0.31
BRD9-216ENST00000518251 SLX4Q8IY92 1834 aa13.1□□□□□ -0.31
BRD9-216ENST00000518251 ERVV-1B6SEH8 477 aa13.09□□□□□ -0.31
BRD9-216ENST00000518251 ATP5J2-PTCD1G3V325 749 aa13.09□□□□□ -0.31
BRD9-216ENST00000518251 SRGNP10124 158 aa13.09□□□□□ -0.31
BRD9-216ENST00000518251 TCIRG1Q13488 830 aa13.09□□□□□ -0.31
BRD9-216ENST00000518251 STYK1Q6J9G0 422 aa13.09□□□□□ -0.31
BRD9-216ENST00000518251 GIGYF2Q6Y7W6 1299 aaKnown RBP13.09□□□□□ -0.31
BRD9-216ENST00000518251 SNED1Q8TER0 1413 aa13.09□□□□□ -0.31
BRD9-216ENST00000518251 CWC25Q9NXE8 425 aaPredicted RBP13.09□□□□□ -0.31
BRD9-216ENST00000518251 ZNF541Q9H0D2 1346 aa13.09□□□□□ -0.31
BRD9-216ENST00000518251 FOXN1O15353 648 aa13.08□□□□□ -0.32
BRD9-216ENST00000518251 ATP8B2P98198 1209 aa13.08□□□□□ -0.32
BRD9-216ENST00000518251 CCDC191Q8NCU4 936 aa13.08□□□□□ -0.32
BRD9-216ENST00000518251 CNKSR1Q969H4 720 aa13.08□□□□□ -0.32
BRD9-216ENST00000518251 ISCA1Q9BUE6 129 aa13.08□□□□□ -0.32
BRD9-216ENST00000518251 IQCA1LA6NCM1 817 aa13.07□□□□□ -0.32
BRD9-216ENST00000518251 ST5P78524 1137 aa13.07□□□□□ -0.32
BRD9-216ENST00000518251 SOGA3Q5TF21 947 aa13.07□□□□□ -0.32
BRD9-216ENST00000518251 LDHDQ86WU2 507 aa13.07□□□□□ -0.32
BRD9-216ENST00000518251 SUCLG2Q96I99 432 aa13.07□□□□□ -0.32
BRD9-216ENST00000518251 SCN4AP35499 1836 aa13.06□□□□□ -0.32
BRD9-216ENST00000518251 PNMA6EA0A0J9YXQ4 647 aa13.06□□□□□ -0.32
BRD9-216ENST00000518251 MTX1Q13505 466 aa13.06□□□□□ -0.32
BRD9-216ENST00000518251 HLFQ16534 295 aa13.06□□□□□ -0.32
BRD9-216ENST00000518251 C7orf43Q8WVR3 580 aa13.06□□□□□ -0.32
BRD9-216ENST00000518251 MASTLQ96GX5 879 aa13.06□□□□□ -0.32
BRD9-216ENST00000518251 SETDB2Q96T68 719 aa13.06□□□□□ -0.32
BRD9-216ENST00000518251 TAF1DQ9H5J8 278 aaPredicted RBP13.06□□□□□ -0.32
BRD9-216ENST00000518251 DCTPP1Q9H773 170 aa13.06□□□□□ -0.32
BRD9-216ENST00000518251 COL4A5P29400 1685 aa13.05□□□□□ -0.32
BRD9-216ENST00000518251 CASP7P55210 303 aa13.05□□□□□ -0.32
BRD9-216ENST00000518251 TRIM28Q13263 835 aaKnown RBP13.05□□□□□ -0.32
BRD9-216ENST00000518251 POLA2Q14181 598 aa13.05□□□□□ -0.32
BRD9-216ENST00000518251 CCDC93Q567U6 631 aa13.05□□□□□ -0.32
BRD9-216ENST00000518251 UBE3BQ7Z3V4 1068 aa13.05□□□□□ -0.32
BRD9-216ENST00000518251 PPP1R42Q7Z4L9 355 aa13.05□□□□□ -0.32
BRD9-216ENST00000518251 SKAP1Q86WV1 359 aa13.05□□□□□ -0.32
BRD9-216ENST00000518251 H7C1W4 665 aa13.04□□□□□ -0.32
BRD9-216ENST00000518251 RGL2O15211 777 aa13.04□□□□□ -0.32
BRD9-216ENST00000518251 NPHP1O15259 732 aa13.04□□□□□ -0.32
BRD9-216ENST00000518251 SRGAP3O43295 1099 aa13.04□□□□□ -0.32
BRD9-216ENST00000518251 RGS3P49796 1198 aa13.04□□□□□ -0.32
BRD9-216ENST00000518251 NUCB1Q02818 461 aa13.04□□□□□ -0.32
BRD9-216ENST00000518251 SSH3Q8TE77 659 aa13.04□□□□□ -0.32
BRD9-216ENST00000518251 KAZALD1Q96I82 304 aa13.04□□□□□ -0.32
BRD9-216ENST00000518251 BICC1Q9H694 974 aaKnown RBP13.04□□□□□ -0.32
BRD9-216ENST00000518251 PRDM10Q9NQV6 1147 aa13.04□□□□□ -0.32
BRD9-216ENST00000518251 ZNF652Q9Y2D9 606 aa13.04□□□□□ -0.32
BRD9-216ENST00000518251 LTBP1Q14766 1721 aa13.04□□□□□ -0.32
BRD9-216ENST00000518251 LAMB2P55268 1798 aa13.04□□□□□ -0.32
BRD9-216ENST00000518251 KLRG2A4D1S0 409 aaPredicted RBP13.03□□□□□ -0.32
BRD9-216ENST00000518251 ITGBL1O95965 494 aaPredicted RBP13.03□□□□□ -0.32
BRD9-216ENST00000518251 PCCAP05165 728 aaPredicted RBP13.03□□□□□ -0.32
BRD9-216ENST00000518251 GPTP24298 496 aa13.03□□□□□ -0.32
BRD9-216ENST00000518251 VEGFBP49765 207 aa13.03□□□□□ -0.32
BRD9-216ENST00000518251 FKBP4Q02790 459 aaKnown RBP eCLIP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms