RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 ZMYND15Q9H091 742 aa7.02□□□□□ -1.29
RFC1-208ENST00000504849 SNRKQ9NRH2 765 aa7.02□□□□□ -1.29
RFC1-208ENST00000504849 DHX15O43143 795 aaKnown RBP7.01□□□□□ -1.29
RFC1-208ENST00000504849 UBTFP17480 764 aaKnown RBP7.01□□□□□ -1.29
RFC1-208ENST00000504849 RNF43Q68DV7 783 aa7.01□□□□□ -1.29
RFC1-208ENST00000504849 DBNDD2Q9BQY9 259 aa7.01□□□□□ -1.29
RFC1-208ENST00000504849 HCN4Q9Y3Q4 1203 aa7.01□□□□□ -1.29
RFC1-208ENST00000504849 HOXA10P31260 410 aaPredicted RBP7□□□□□ -1.29
RFC1-208ENST00000504849 CCINQ13939 588 aa7□□□□□ -1.29
RFC1-208ENST00000504849 COL19A1Q14993 1142 aa7□□□□□ -1.29
RFC1-208ENST00000504849 TRPM4Q8TD43 1214 aa7□□□□□ -1.29
RFC1-208ENST00000504849 ASIC4Q96FT7 647 aa7□□□□□ -1.29
RFC1-208ENST00000504849 ZFATQ9P243 1243 aa7□□□□□ -1.29
RFC1-208ENST00000504849 HMX2A2RU54 273 aa6.99□□□□□ -1.29
RFC1-208ENST00000504849 MAP3K6O95382 1288 aa6.99□□□□□ -1.29
RFC1-208ENST00000504849 SETDB1Q15047 1291 aa6.99□□□□□ -1.29
RFC1-208ENST00000504849 ELMSAN1Q6PJG2 1045 aa6.99□□□□□ -1.29
RFC1-208ENST00000504849 MLLT1Q03111 559 aaPredicted RBP6.98□□□□□ -1.29
RFC1-208ENST00000504849 PCSK7Q16549 785 aa6.98□□□□□ -1.29
RFC1-208ENST00000504849 PNMA5Q96PV4 448 aa6.98□□□□□ -1.29
RFC1-208ENST00000504849 KRTAP9-3Q9BYQ3 159 aa6.98□□□□□ -1.29
RFC1-208ENST00000504849 SMG9Q9H0W8 520 aaKnown RBP6.98□□□□□ -1.29
RFC1-208ENST00000504849 TBC1D2BQ9UPU7 963 aa6.98□□□□□ -1.29
RFC1-208ENST00000504849 PSMA6P60900 246 aaKnown RBP6.97□□□□□ -1.29
RFC1-208ENST00000504849 SHKBP1Q8TBC3 707 aa6.97□□□□□ -1.29
RFC1-208ENST00000504849 WISP1O95388 367 aa6.96□□□□□ -1.3
RFC1-208ENST00000504849 GTF2IP78347 998 aa6.96□□□□□ -1.3
RFC1-208ENST00000504849 GPLD1P80108 840 aa6.96□□□□□ -1.3
RFC1-208ENST00000504849 DHX32Q7L7V1 743 aaKnown RBP6.96□□□□□ -1.3
RFC1-208ENST00000504849 FAM46AQ96IP4 442 aaKnown RBP6.96□□□□□ -1.3
RFC1-208ENST00000504849 TSPAN10Q9H1Z9 355 aaPredicted RBP6.96□□□□□ -1.3
RFC1-208ENST00000504849 DBX1A6NMT0 343 aa6.95□□□□□ -1.3
RFC1-208ENST00000504849 TRIM26Q12899 539 aaPredicted RBP6.95□□□□□ -1.3
RFC1-208ENST00000504849 ZNF124Q15973 351 aa6.95□□□□□ -1.3
RFC1-208ENST00000504849 ZNF648Q5T619 568 aaPredicted RBP6.95□□□□□ -1.3
RFC1-208ENST00000504849 SRA1Q9HD15 236 aaKnown RBP6.95□□□□□ -1.3
RFC1-208ENST00000504849 PIK3CDO00329 1044 aa6.94□□□□□ -1.3
RFC1-208ENST00000504849 DMGDHQ9UI17 866 aaKnown RBP6.94□□□□□ -1.3
RFC1-208ENST00000504849 JUNBP17275 347 aaPredicted RBP6.93□□□□□ -1.3
RFC1-208ENST00000504849 VAC14Q08AM6 782 aa6.93□□□□□ -1.3
RFC1-208ENST00000504849 MSMPQ1L6U9 139 aa6.93□□□□□ -1.3
RFC1-208ENST00000504849 UVSSAQ2YD98 709 aa6.93□□□□□ -1.3
RFC1-208ENST00000504849 UTP4Q969X6 686 aaKnown RBP6.93□□□□□ -1.3
RFC1-208ENST00000504849 TM4SF5O14894 197 aa6.92□□□□□ -1.3
RFC1-208ENST00000504849 HFE2Q6ZVN8 426 aa6.92□□□□□ -1.3
RFC1-208ENST00000504849 NPM2Q86SE8 214 aaKnown RBP6.92□□□□□ -1.3
RFC1-208ENST00000504849 GALNT11Q8NCW6 608 aa6.92□□□□□ -1.3
RFC1-208ENST00000504849 MYRFLQ96LU7 910 aa6.92□□□□□ -1.3
RFC1-208ENST00000504849 KRTAP9-8Q9BYQ0 159 aa6.92□□□□□ -1.3
RFC1-208ENST00000504849 CCDC39Q9UFE4 941 aa6.92□□□□□ -1.3
RFC1-208ENST00000504849 BCS1LQ9Y276 419 aa6.92□□□□□ -1.3
RFC1-208ENST00000504849 APBB1O00213 710 aa6.91□□□□□ -1.3
RFC1-208ENST00000504849 IER5Q5VY09 327 aa6.91□□□□□ -1.3
RFC1-208ENST00000504849 MAP4K3Q8IVH8 894 aa6.91□□□□□ -1.3
RFC1-208ENST00000504849 ALDH16A1Q8IZ83 802 aa6.91□□□□□ -1.3
RFC1-208ENST00000504849 IL22RA1Q8N6P7 574 aa6.91□□□□□ -1.3
RFC1-208ENST00000504849 IFT43Q96FT9 208 aa6.91□□□□□ -1.3
RFC1-208ENST00000504849 PRNPP04156 253 aa6.9□□□□□ -1.3
RFC1-208ENST00000504849 TARSP26639 723 aaKnown RBP6.9□□□□□ -1.3
RFC1-208ENST00000504849 PSME1Q06323 249 aa6.9□□□□□ -1.3
RFC1-208ENST00000504849 EML3Q32P44 896 aa6.9□□□□□ -1.3
RFC1-208ENST00000504849 KRT25Q7Z3Z0 450 aa6.9□□□□□ -1.3
RFC1-208ENST00000504849 COL26A1Q96A83 441 aa6.9□□□□□ -1.3
RFC1-208ENST00000504849 FAM83CQ9BQN1 747 aa6.9□□□□□ -1.3
RFC1-208ENST00000504849 CEP41Q9BYV8 373 aa6.9□□□□□ -1.3
RFC1-208ENST00000504849 NOD1Q9Y239 953 aa6.9□□□□□ -1.3
RFC1-208ENST00000504849 C21orf2O43822 256 aa6.89□□□□□ -1.31
RFC1-208ENST00000504849 EIF2AK2P19525 551 aaKnown RBP6.89□□□□□ -1.31
RFC1-208ENST00000504849 CLEC10AQ8IUN9 316 aa6.89□□□□□ -1.31
RFC1-208ENST00000504849 FAM20CQ8IXL6 584 aa6.89□□□□□ -1.31
RFC1-208ENST00000504849 PLD4Q96BZ4 506 aa6.89□□□□□ -1.31
RFC1-208ENST00000504849 KCNK4Q9NYG8 393 aa6.89□□□□□ -1.31
RFC1-208ENST00000504849 ANGEL1Q9UNK9 670 aaKnown RBP6.89□□□□□ -1.31
RFC1-208ENST00000504849 PAPLNO95428 1278 aa6.88□□□□□ -1.31
RFC1-208ENST00000504849 ZNF865P0CJ78 1059 aaPredicted RBP6.88□□□□□ -1.31
RFC1-208ENST00000504849 NRLP54845 237 aa6.88□□□□□ -1.31
RFC1-208ENST00000504849 GDF6Q6KF10 455 aaPredicted RBP6.88□□□□□ -1.31
RFC1-208ENST00000504849 PIM2Q9P1W9 311 aa6.88□□□□□ -1.31
RFC1-208ENST00000504849 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.88□□□□□ -1.31
RFC1-208ENST00000504849 WDR64B1ANS9 1081 aa6.87□□□□□ -1.31
RFC1-208ENST00000504849 KIAA1211Q6ZU35 1233 aa6.87□□□□□ -1.31
RFC1-208ENST00000504849 IL27Q8NEV9 243 aa6.87□□□□□ -1.31
RFC1-208ENST00000504849 DCAF11Q8TEB1 546 aa6.87□□□□□ -1.31
RFC1-208ENST00000504849 KIAA1024Q9UPX6 916 aa6.87□□□□□ -1.31
RFC1-208ENST00000504849 TGFBR3LH3BV60 316 aa6.86□□□□□ -1.31
RFC1-208ENST00000504849 INPP5BP32019 993 aa6.86□□□□□ -1.31
RFC1-208ENST00000504849 ACAD11Q709F0 780 aa6.86□□□□□ -1.31
RFC1-208ENST00000504849 NCANO14594 1321 aa6.85□□□□□ -1.31
RFC1-208ENST00000504849 ZBTB7BO15156 539 aaPredicted RBP6.85□□□□□ -1.31
RFC1-208ENST00000504849 SASH3O75995 380 aa6.85□□□□□ -1.31
RFC1-208ENST00000504849 RARAP10276 462 aa6.85□□□□□ -1.31
RFC1-208ENST00000504849 NCOA4Q13772 614 aa6.85□□□□□ -1.31
RFC1-208ENST00000504849 HIF1AQ16665 826 aa6.85□□□□□ -1.31
RFC1-208ENST00000504849 BEND4Q6ZU67 534 aa6.85□□□□□ -1.31
RFC1-208ENST00000504849 FBXL18Q96ME1 805 aa6.85□□□□□ -1.31
RFC1-208ENST00000504849 CHMP3Q9Y3E7 222 aa6.85□□□□□ -1.31
RFC1-208ENST00000504849 CARMIL2Q6F5E8 1435 aa6.84□□□□□ -1.31
RFC1-208ENST00000504849 J3QW42 95 aa6.84□□□□□ -1.31
RFC1-208ENST00000504849 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.84□□□□□ -1.31
RFC1-208ENST00000504849 C2orf49Q9BVC5 232 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms