RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 TNS2Q63HR2 1409 aa13.42□□□□□ -0.26
RAB11FIP3-211ENST00000495663 CCNYL3P0C7X3 344 aa13.42□□□□□ -0.26
RAB11FIP3-211ENST00000495663 DDB1Q16531 1140 aa13.42□□□□□ -0.26
RAB11FIP3-211ENST00000495663 SEPT12Q8IYM1 358 aa13.42□□□□□ -0.26
RAB11FIP3-211ENST00000495663 HPS1Q92902 700 aa13.42□□□□□ -0.26
RAB11FIP3-211ENST00000495663 EXOC5O00471 708 aa13.41□□□□□ -0.26
RAB11FIP3-211ENST00000495663 MTMR2Q13614 643 aa13.41□□□□□ -0.26
RAB11FIP3-211ENST00000495663 RSPH6AQ9H0K4 717 aa13.41□□□□□ -0.26
RAB11FIP3-211ENST00000495663 PNNQ9H307 717 aaKnown RBP13.41□□□□□ -0.26
RAB11FIP3-211ENST00000495663 SMCPP49901 116 aaPredicted RBP13.4□□□□□ -0.26
RAB11FIP3-211ENST00000495663 AK7Q96M32 723 aa13.4□□□□□ -0.26
RAB11FIP3-211ENST00000495663 SPG7Q9UQ90 795 aa13.4□□□□□ -0.26
RAB11FIP3-211ENST00000495663 ALDH1A1P00352 501 aa13.39□□□□□ -0.27
RAB11FIP3-211ENST00000495663 NEFMP07197 916 aa13.39□□□□□ -0.27
RAB11FIP3-211ENST00000495663 PRKAR2BP31323 418 aa13.39□□□□□ -0.27
RAB11FIP3-211ENST00000495663 PDE3BQ13370 1112 aa13.39□□□□□ -0.27
RAB11FIP3-211ENST00000495663 LINC01559Q495D7 138 aa13.39□□□□□ -0.27
RAB11FIP3-211ENST00000495663 PLEKHO1Q53GL0 409 aaPredicted RBP13.39□□□□□ -0.27
RAB11FIP3-211ENST00000495663 ZCRB1Q8TBF4 217 aaKnown RBP13.39□□□□□ -0.27
RAB11FIP3-211ENST00000495663 PNISRQ8TF01 805 aaKnown RBP13.39□□□□□ -0.27
RAB11FIP3-211ENST00000495663 PTPRNQ16849 979 aa13.38□□□□□ -0.27
RAB11FIP3-211ENST00000495663 AMOTQ4VCS5 1084 aa13.38□□□□□ -0.27
RAB11FIP3-211ENST00000495663 EHBP1Q8NDI1 1231 aa13.38□□□□□ -0.27
RAB11FIP3-211ENST00000495663 ADAMTS8Q9UP79 889 aa13.38□□□□□ -0.27
RAB11FIP3-211ENST00000495663 PCDHB15Q9Y5E8 787 aa13.38□□□□□ -0.27
RAB11FIP3-211ENST00000495663 VIRMAQ69YN4 1812 aaKnown RBP13.38□□□□□ -0.27
RAB11FIP3-211ENST00000495663 PCDH11XQ9BZA7 1347 aa13.38□□□□□ -0.27
RAB11FIP3-211ENST00000495663 PCDH11YQ9BZA8 1340 aa13.38□□□□□ -0.27
RAB11FIP3-211ENST00000495663 RSBN1LQ6PCB5 846 aaPredicted RBP13.37□□□□□ -0.27
RAB11FIP3-211ENST00000495663 KRT27Q7Z3Y8 459 aa13.37□□□□□ -0.27
RAB11FIP3-211ENST00000495663 DLG5Q8TDM6 1919 aa13.37□□□□□ -0.27
RAB11FIP3-211ENST00000495663 MAPK8IP3Q9UPT6 1336 aa13.37□□□□□ -0.27
RAB11FIP3-211ENST00000495663 UNC93B1Q9H1C4 597 aa13.36□□□□□ -0.27
RAB11FIP3-211ENST00000495663 SH3BP2P78314 561 aa13.35□□□□□ -0.27
RAB11FIP3-211ENST00000495663 ZNF530Q6P9A1 599 aaPredicted RBP13.35□□□□□ -0.27
RAB11FIP3-211ENST00000495663 FAM9BQ8IZU0 186 aa13.35□□□□□ -0.27
RAB11FIP3-211ENST00000495663 GAS2L2Q8NHY3 880 aa13.35□□□□□ -0.27
RAB11FIP3-211ENST00000495663 DDX54Q8TDD1 881 aaKnown RBP13.35□□□□□ -0.27
RAB11FIP3-211ENST00000495663 PLEKHF1Q96S99 279 aa13.35□□□□□ -0.27
RAB11FIP3-211ENST00000495663 SBF2Q86WG5 1849 aa13.34□□□□□ -0.27
RAB11FIP3-211ENST00000495663 DOT1LQ8TEK3 1739 aa13.34□□□□□ -0.27
RAB11FIP3-211ENST00000495663 CSPP1Q1MSJ5 1256 aa13.34□□□□□ -0.27
RAB11FIP3-211ENST00000495663 MTHFSDQ2M296 383 aaKnown RBP13.34□□□□□ -0.27
RAB11FIP3-211ENST00000495663 C1orf141Q5JVX7 400 aa13.34□□□□□ -0.27
RAB11FIP3-211ENST00000495663 CCDC146Q8IYE0 955 aa13.34□□□□□ -0.27
RAB11FIP3-211ENST00000495663 IFNL2Q8IZJ0 200 aa13.34□□□□□ -0.27
RAB11FIP3-211ENST00000495663 MARCH10Q8NA82 808 aaPredicted RBP13.34□□□□□ -0.27
RAB11FIP3-211ENST00000495663 RUNDC1Q96C34 613 aa13.34□□□□□ -0.27
RAB11FIP3-211ENST00000495663 PHACTR3Q96KR7 559 aa13.34□□□□□ -0.27
RAB11FIP3-211ENST00000495663 ATP13A2Q9NQ11 1180 aa13.34□□□□□ -0.27
RAB11FIP3-211ENST00000495663 EVA1BQ9NVM1 165 aa13.34□□□□□ -0.27
RAB11FIP3-211ENST00000495663 SCN11AQ9UI33 1791 aa13.33□□□□□ -0.28
RAB11FIP3-211ENST00000495663 CYP27B1O15528 508 aa13.33□□□□□ -0.28
RAB11FIP3-211ENST00000495663 PHKG2P15735 406 aa13.33□□□□□ -0.28
RAB11FIP3-211ENST00000495663 BAP1Q92560 729 aa13.33□□□□□ -0.28
RAB11FIP3-211ENST00000495663 KAT6BQ8WYB5 2073 aa13.32□□□□□ -0.28
RAB11FIP3-211ENST00000495663 SPDYE5A6NIY4 337 aa13.32□□□□□ -0.28
RAB11FIP3-211ENST00000495663 CFAP99D6REC4 459 aa13.32□□□□□ -0.28
RAB11FIP3-211ENST00000495663 HSP90AB1P08238 724 aaKnown RBP13.32□□□□□ -0.28
RAB11FIP3-211ENST00000495663 KCNH2Q12809 1159 aa13.32□□□□□ -0.28
RAB11FIP3-211ENST00000495663 AKAP4Q5JQC9 854 aa13.32□□□□□ -0.28
RAB11FIP3-211ENST00000495663 SLC24A3Q9HC58 644 aa13.32□□□□□ -0.28
RAB11FIP3-211ENST00000495663 BCL9O00512 1426 aa13.31□□□□□ -0.28
RAB11FIP3-211ENST00000495663 TOGARAM1Q9Y4F4 1720 aa13.31□□□□□ -0.28
RAB11FIP3-211ENST00000495663 SPTLC1O15269 473 aa13.31□□□□□ -0.28
RAB11FIP3-211ENST00000495663 SIAH2O43255 324 aa13.31□□□□□ -0.28
RAB11FIP3-211ENST00000495663 PDE4DQ08499 809 aa13.31□□□□□ -0.28
RAB11FIP3-211ENST00000495663 DIXDC1Q155Q3 683 aa13.31□□□□□ -0.28
RAB11FIP3-211ENST00000495663 FAM182BQ5T319 152 aa13.31□□□□□ -0.28
RAB11FIP3-211ENST00000495663 FAM196AQ6ZSG2 479 aa13.31□□□□□ -0.28
RAB11FIP3-211ENST00000495663 ITGB4P16144 1822 aa13.31□□□□□ -0.28
RAB11FIP3-211ENST00000495663 MAP3K5Q99683 1374 aa13.31□□□□□ -0.28
RAB11FIP3-211ENST00000495663 NHSQ6T4R5 1651 aa13.31□□□□□ -0.28
RAB11FIP3-211ENST00000495663 ADAMTS7Q9UKP4 1686 aa13.31□□□□□ -0.28
RAB11FIP3-211ENST00000495663 EP400Q96L91 3159 aa13.3□□□□□ -0.28
RAB11FIP3-211ENST00000495663 GNAT3A8MTJ3 354 aa13.3□□□□□ -0.28
RAB11FIP3-211ENST00000495663 NFE2L2Q16236 605 aa13.3□□□□□ -0.28
RAB11FIP3-211ENST00000495663 RIC3Q7Z5B4 369 aa13.3□□□□□ -0.28
RAB11FIP3-211ENST00000495663 SNRPBP14678 240 aaKnown RBP13.29□□□□□ -0.28
RAB11FIP3-211ENST00000495663 CTHP32929 405 aa13.29□□□□□ -0.28
RAB11FIP3-211ENST00000495663 GJA5P36382 358 aa13.29□□□□□ -0.28
RAB11FIP3-211ENST00000495663 DESI1Q6ICB0 168 aa13.29□□□□□ -0.28
RAB11FIP3-211ENST00000495663 DCAF5Q96JK2 942 aa13.29□□□□□ -0.28
RAB11FIP3-211ENST00000495663 TLL2Q9Y6L7 1015 aa13.29□□□□□ -0.28
RAB11FIP3-211ENST00000495663 TMPOP42166 694 aaKnown RBP13.28□□□□□ -0.28
RAB11FIP3-211ENST00000495663 ZBTB3Q9H5J0 574 aa13.28□□□□□ -0.28
RAB11FIP3-211ENST00000495663 WASF2Q9Y6W5 498 aa13.28□□□□□ -0.28
RAB11FIP3-211ENST00000495663 KDM6AO15550 1401 aaPredicted RBP13.28□□□□□ -0.28
RAB11FIP3-211ENST00000495663 APAF1O14727 1248 aa13.27□□□□□ -0.29
RAB11FIP3-211ENST00000495663 HTATSF1O43719 755 aaKnown RBP13.27□□□□□ -0.29
RAB11FIP3-211ENST00000495663 RIPK4P57078 832 aa13.27□□□□□ -0.29
RAB11FIP3-211ENST00000495663 LMOD3Q0VAK6 560 aa13.27□□□□□ -0.29
RAB11FIP3-211ENST00000495663 MPRIPQ6WCQ1 1025 aa13.27□□□□□ -0.29
RAB11FIP3-211ENST00000495663 ZNF511Q8NB15 262 aa13.27□□□□□ -0.29
RAB11FIP3-211ENST00000495663 RTF1Q92541 710 aaKnown RBP13.27□□□□□ -0.29
RAB11FIP3-211ENST00000495663 TNS1Q9HBL0 1735 aaKnown RBP13.27□□□□□ -0.29
RAB11FIP3-211ENST00000495663 BTAF1O14981 1849 aa13.26□□□□□ -0.29
RAB11FIP3-211ENST00000495663 RNMTO43148 476 aaKnown RBP13.26□□□□□ -0.29
RAB11FIP3-211ENST00000495663 SIPA1L3O60292 1781 aaPredicted RBP13.26□□□□□ -0.29
RAB11FIP3-211ENST00000495663 NEUROD2Q15784 382 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms