RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 TAF5LO75529 589 aa18.74■□□□□ 0.59
BRD9-208ENST00000489816 RFX5P48382 616 aaPredicted RBP18.74■□□□□ 0.59
BRD9-208ENST00000489816 NCAPD2Q15021 1401 aa18.73■□□□□ 0.59
BRD9-208ENST00000489816 LRRC24Q50LG9 513 aa18.73■□□□□ 0.59
BRD9-208ENST00000489816 LMO7Q8WWI1 1683 aa18.73■□□□□ 0.59
BRD9-208ENST00000489816 COL15A1P39059 1388 aa18.73■□□□□ 0.59
BRD9-208ENST00000489816 IL17RAQ96F46 866 aa18.73■□□□□ 0.59
BRD9-208ENST00000489816 HSP90AB3PQ58FF7 597 aa18.73■□□□□ 0.59
BRD9-208ENST00000489816 C17orf53Q8N3J3 647 aaPredicted RBP18.73■□□□□ 0.59
BRD9-208ENST00000489816 PDLIM2Q96JY6 352 aa18.73■□□□□ 0.59
BRD9-208ENST00000489816 PUS3Q9BZE2 481 aaKnown RBP18.73■□□□□ 0.59
BRD9-208ENST00000489816 TOB2Q14106 344 aaPredicted RBP18.72■□□□□ 0.59
BRD9-208ENST00000489816 RNF20Q5VTR2 975 aa18.72■□□□□ 0.59
BRD9-208ENST00000489816 UBE2HP62256 183 aa18.71■□□□□ 0.59
BRD9-208ENST00000489816 COPRSQ9NQ92 184 aa18.71■□□□□ 0.59
BRD9-208ENST00000489816 A0A0G2JS52 829 aa18.71■□□□□ 0.59
BRD9-208ENST00000489816 PSMA5P28066 241 aa18.71■□□□□ 0.59
BRD9-208ENST00000489816 CKAP2LQ8IYA6 745 aa18.71■□□□□ 0.59
BRD9-208ENST00000489816 EPB41L2O43491 1005 aaKnown RBP18.71■□□□□ 0.58
BRD9-208ENST00000489816 RPS6KB1P23443 525 aa18.71■□□□□ 0.58
BRD9-208ENST00000489816 TTC6Q86TZ1 520 aa18.71■□□□□ 0.58
BRD9-208ENST00000489816 CCDC183Q5T5S1 534 aa18.7■□□□□ 0.58
BRD9-208ENST00000489816 SYNE4Q8N205 404 aa18.7■□□□□ 0.58
BRD9-208ENST00000489816 ARID3AQ99856 593 aa18.7■□□□□ 0.58
BRD9-208ENST00000489816 HIP1O00291 1037 aa18.7■□□□□ 0.58
BRD9-208ENST00000489816 CYP21A2P08686 494 aa18.7■□□□□ 0.58
BRD9-208ENST00000489816 FKBP4Q02790 459 aaKnown RBP eCLIP18.7■□□□□ 0.58
BRD9-208ENST00000489816 Q6ZUG5 572 aa18.7■□□□□ 0.58
BRD9-208ENST00000489816 BRF1Q92994 677 aa18.7■□□□□ 0.58
BRD9-208ENST00000489816 ZSCAN31Q96LW9 406 aaPredicted RBP18.7■□□□□ 0.58
BRD9-208ENST00000489816 SH2B1Q9NRF2 756 aaPredicted RBP18.7■□□□□ 0.58
BRD9-208ENST00000489816 CCT2P78371 535 aaKnown RBP18.69■□□□□ 0.58
BRD9-208ENST00000489816 TM6SF1Q9BZW5 370 aa18.69■□□□□ 0.58
BRD9-208ENST00000489816 TTC12Q9H892 705 aaPredicted RBP18.69■□□□□ 0.58
BRD9-208ENST00000489816 SLIT3O75094 1523 aa18.69■□□□□ 0.58
BRD9-208ENST00000489816 LIG1P18858 919 aa18.69■□□□□ 0.58
BRD9-208ENST00000489816 NOL7Q9UMY1 257 aaKnown RBP18.69■□□□□ 0.58
BRD9-208ENST00000489816 ATP6V1DQ9Y5K8 247 aa18.69■□□□□ 0.58
BRD9-208ENST00000489816 PHF14O94880 888 aa18.69■□□□□ 0.58
BRD9-208ENST00000489816 RBM10P98175 930 aaKnown RBP18.69■□□□□ 0.58
BRD9-208ENST00000489816 RAB11FIP4Q86YS3 637 aa18.69■□□□□ 0.58
BRD9-208ENST00000489816 PLBD2Q8NHP8 589 aa18.69■□□□□ 0.58
BRD9-208ENST00000489816 ZCRB1Q8TBF4 217 aaKnown RBP18.69■□□□□ 0.58
BRD9-208ENST00000489816 NEK1Q96PY6 1258 aa18.69■□□□□ 0.58
BRD9-208ENST00000489816 ATP5JP18859 108 aa18.68■□□□□ 0.58
BRD9-208ENST00000489816 GUCY1B3Q02153 619 aa18.68■□□□□ 0.58
BRD9-208ENST00000489816 ADCY5O95622 1261 aa18.68■□□□□ 0.58
BRD9-208ENST00000489816 SPC24Q8NBT2 197 aa18.68■□□□□ 0.58
BRD9-208ENST00000489816 TTLL5Q6EMB2 1281 aa18.67■□□□□ 0.58
BRD9-208ENST00000489816 FOXO4P98177 505 aa18.67■□□□□ 0.58
BRD9-208ENST00000489816 FAM89AQ96GI7 184 aa18.67■□□□□ 0.58
BRD9-208ENST00000489816 NCOA5Q9HCD5 579 aaKnown RBP18.67■□□□□ 0.58
BRD9-208ENST00000489816 ZKSCAN5Q9Y2L8 839 aa18.67■□□□□ 0.58
BRD9-208ENST00000489816 USP54Q70EL1 1684 aa18.67■□□□□ 0.58
BRD9-208ENST00000489816 GOLGA6L4A6NEF3 574 aa18.67■□□□□ 0.58
BRD9-208ENST00000489816 HAND2P61296 217 aa18.67■□□□□ 0.58
BRD9-208ENST00000489816 ZNF609O15014 1411 aa18.66■□□□□ 0.58
BRD9-208ENST00000489816 STOX1Q6ZVD7 989 aa18.66■□□□□ 0.58
BRD9-208ENST00000489816 CADPS2Q86UW7 1296 aa18.66■□□□□ 0.58
BRD9-208ENST00000489816 FTOQ9C0B1 505 aaKnown RBP eCLIP18.66■□□□□ 0.588e-6■■■□□ 15.4
BRD9-208ENST00000489816 GPTP24298 496 aa18.66■□□□□ 0.58
BRD9-208ENST00000489816 EVA1CP58658 441 aa18.66■□□□□ 0.58
BRD9-208ENST00000489816 PI16Q6UXB8 463 aa18.66■□□□□ 0.58
BRD9-208ENST00000489816 CWC25Q9NXE8 425 aaPredicted RBP18.66■□□□□ 0.58
BRD9-208ENST00000489816 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.66■□□□□ 0.58
BRD9-208ENST00000489816 MCMDC2Q4G0Z9 681 aa18.65■□□□□ 0.58
BRD9-208ENST00000489816 KCNB2Q92953 911 aa18.65■□□□□ 0.58
BRD9-208ENST00000489816 GPHNQ9NQX3 736 aaPredicted RBP18.65■□□□□ 0.58
BRD9-208ENST00000489816 MED23Q9ULK4 1368 aa18.65■□□□□ 0.58
BRD9-208ENST00000489816 N4BP2Q86UW6 1770 aaPredicted RBP18.65■□□□□ 0.58
BRD9-208ENST00000489816 C5P01031 1676 aa18.65■□□□□ 0.58
BRD9-208ENST00000489816 KDM4AO75164 1064 aa18.65■□□□□ 0.58
BRD9-208ENST00000489816 APOBRQ0VD83 1088 aa18.65■□□□□ 0.58
BRD9-208ENST00000489816 DNTTIP2Q5QJE6 756 aaKnown RBP18.65■□□□□ 0.58
BRD9-208ENST00000489816 ATG9AQ7Z3C6 839 aa18.65■□□□□ 0.58
BRD9-208ENST00000489816 MST1RQ04912 1400 aa18.65■□□□□ 0.58
BRD9-208ENST00000489816 CASP7P55210 303 aa18.65■□□□□ 0.58
BRD9-208ENST00000489816 KRT85P78386 507 aa18.65■□□□□ 0.58
BRD9-208ENST00000489816 GORABQ5T7V8 394 aa18.65■□□□□ 0.58
BRD9-208ENST00000489816 SPATA31A3Q5VYP0 1347 aa18.64■□□□□ 0.57
BRD9-208ENST00000489816 H3BQV1 296 aa18.64■□□□□ 0.57
BRD9-208ENST00000489816 AP5Z1O43299 807 aa18.64■□□□□ 0.57
BRD9-208ENST00000489816 RABL6Q3YEC7 729 aaPredicted RBP18.64■□□□□ 0.57
BRD9-208ENST00000489816 IFFO2Q5TF58 517 aa18.64■□□□□ 0.57
BRD9-208ENST00000489816 PAG1Q9NWQ8 432 aa18.64■□□□□ 0.57
BRD9-208ENST00000489816 DACT1Q9NYF0 836 aa18.64■□□□□ 0.57
BRD9-208ENST00000489816 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.64■□□□□ 0.574e-9■■■■□ 21.4
BRD9-208ENST00000489816 CCDC39Q9UFE4 941 aa18.64■□□□□ 0.57
BRD9-208ENST00000489816 A0A087WWV3 80 aa18.63■□□□□ 0.57
BRD9-208ENST00000489816 A0A1B0GUL7 405 aa18.63■□□□□ 0.57
BRD9-208ENST00000489816 ADORA1P30542 326 aa18.63■□□□□ 0.57
BRD9-208ENST00000489816 TMEM87AQ8NBN3 555 aa18.63■□□□□ 0.57
BRD9-208ENST00000489816 SYTL4Q96C24 671 aaPredicted RBP18.63■□□□□ 0.57
BRD9-208ENST00000489816 SPATA32Q96LK8 384 aa18.63■□□□□ 0.57
BRD9-208ENST00000489816 HAUS7Q99871 368 aa18.63■□□□□ 0.57
BRD9-208ENST00000489816 OFD1O75665 1012 aa18.63■□□□□ 0.57
BRD9-208ENST00000489816 BRINP3Q76B58 766 aa18.63■□□□□ 0.57
BRD9-208ENST00000489816 FBXW7Q969H0 707 aa18.63■□□□□ 0.57
BRD9-208ENST00000489816 IFIT1P09914 478 aaKnown RBP18.63■□□□□ 0.57
BRD9-208ENST00000489816 ASAP1Q9ULH1 1129 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms