RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 USPL1Q5W0Q7 1092 aa20.29■□□□□ 0.84
FDPS-212ENST00000487002 VSIG10Q8N0Z9 540 aa20.29■□□□□ 0.84
FDPS-212ENST00000487002 STX6O43752 255 aa20.28■□□□□ 0.84
FDPS-212ENST00000487002 IL15P40933 162 aaPredicted RBP20.28■□□□□ 0.84
FDPS-212ENST00000487002 DDX54Q8TDD1 881 aaKnown RBP20.28■□□□□ 0.84
FDPS-212ENST00000487002 SYAP1Q96A49 352 aaPredicted RBP20.28■□□□□ 0.84
FDPS-212ENST00000487002 DBNDD2Q9BQY9 259 aa20.28■□□□□ 0.84
FDPS-212ENST00000487002 TEX13AQ9BXU3 409 aaPredicted RBP20.28■□□□□ 0.84
FDPS-212ENST00000487002 STRN4Q9NRL3 753 aa20.28■□□□□ 0.84
FDPS-212ENST00000487002 ATP6V1DQ9Y5K8 247 aa20.28■□□□□ 0.84
FDPS-212ENST00000487002 PALLDQ8WX93 1383 aa20.28■□□□□ 0.84
FDPS-212ENST00000487002 ZNF609O15014 1411 aa20.28■□□□□ 0.84
FDPS-212ENST00000487002 TAF5LO75529 589 aa20.27■□□□□ 0.84
FDPS-212ENST00000487002 CIAO1O76071 339 aa20.27■□□□□ 0.84
FDPS-212ENST00000487002 CPA1P15085 419 aa20.27■□□□□ 0.84
FDPS-212ENST00000487002 ANP32BQ92688 251 aaKnown RBP20.27■□□□□ 0.84
FDPS-212ENST00000487002 TMOD3Q9NYL9 352 aa20.27■□□□□ 0.84
FDPS-212ENST00000487002 SYT1P21579 422 aa20.27■□□□□ 0.84
FDPS-212ENST00000487002 KRT32Q14532 448 aa20.27■□□□□ 0.84
FDPS-212ENST00000487002 ATG9AQ7Z3C6 839 aa20.27■□□□□ 0.84
FDPS-212ENST00000487002 CHAMP1Q96JM3 812 aa20.27■□□□□ 0.84
FDPS-212ENST00000487002 PPP1R9BQ96SB3 815 aa20.27■□□□□ 0.84
FDPS-212ENST00000487002 TMEM63CQ9P1W3 806 aa20.27■□□□□ 0.84
FDPS-212ENST00000487002 TCHHQ07283 1943 aa20.27■□□□□ 0.84
FDPS-212ENST00000487002 LARGE1O95461 756 aa20.26■□□□□ 0.83
FDPS-212ENST00000487002 BLOC1S2Q6QNY1 142 aa20.26■□□□□ 0.83
FDPS-212ENST00000487002 LRSAM1Q6UWE0 723 aa20.26■□□□□ 0.83
FDPS-212ENST00000487002 ZNF589Q86UQ0 364 aaPredicted RBP20.26■□□□□ 0.83
FDPS-212ENST00000487002 ISCA1Q9BUE6 129 aa20.26■□□□□ 0.83
FDPS-212ENST00000487002 SH3TC1Q8TE82 1336 aa20.25■□□□□ 0.83
FDPS-212ENST00000487002 WNK3Q9BYP7 1800 aa20.25■□□□□ 0.83
FDPS-212ENST00000487002 F13A1P00488 732 aa20.25■□□□□ 0.83
FDPS-212ENST00000487002 RPS6KB1P23443 525 aa20.25■□□□□ 0.83
FDPS-212ENST00000487002 TRIM28Q13263 835 aaKnown RBP20.25■□□□□ 0.83
FDPS-212ENST00000487002 CCDC83Q8IWF9 413 aa20.25■□□□□ 0.83
FDPS-212ENST00000487002 ZBTB3Q9H5J0 574 aa20.25■□□□□ 0.83
FDPS-212ENST00000487002 RBM27Q9P2N5 1060 aaKnown RBP20.25■□□□□ 0.83
FDPS-212ENST00000487002 FBXO3Q9UK99 471 aa20.25■□□□□ 0.83
FDPS-212ENST00000487002 CHMP3Q9Y3E7 222 aa20.25■□□□□ 0.83
FDPS-212ENST00000487002 DISP2A7MBM2 1401 aa20.25■□□□□ 0.83
FDPS-212ENST00000487002 EYA2O00167 538 aa20.24■□□□□ 0.83
FDPS-212ENST00000487002 KBTBD3Q8NAB2 608 aa20.24■□□□□ 0.83
FDPS-212ENST00000487002 U3KPZ7 1027 aaPredicted RBP20.24■□□□□ 0.83
FDPS-212ENST00000487002 ANKRD36CQ5JPF3 1778 aa20.24■□□□□ 0.83
FDPS-212ENST00000487002 GJB2P29033 226 aa20.24■□□□□ 0.83
FDPS-212ENST00000487002 ME3Q16798 604 aa20.24■□□□□ 0.83
FDPS-212ENST00000487002 EDC3Q96F86 508 aaKnown RBP20.24■□□□□ 0.83
FDPS-212ENST00000487002 RRAGDQ9NQL2 400 aaPredicted RBP20.24■□□□□ 0.83
FDPS-212ENST00000487002 NSFL1CQ9UNZ2 370 aaKnown RBP20.24■□□□□ 0.83
FDPS-212ENST00000487002 COL22A1Q8NFW1 1626 aaPredicted RBP20.23■□□□□ 0.83
FDPS-212ENST00000487002 PHF14O94880 888 aa20.23■□□□□ 0.83
FDPS-212ENST00000487002 TCIRG1Q13488 830 aa20.23■□□□□ 0.83
FDPS-212ENST00000487002 MCMDC2Q4G0Z9 681 aa20.23■□□□□ 0.83
FDPS-212ENST00000487002 TRIM44Q96DX7 344 aaPredicted RBP20.23■□□□□ 0.83
FDPS-212ENST00000487002 DNAJC2Q99543 621 aaKnown RBP20.23■□□□□ 0.83
FDPS-212ENST00000487002 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.23■□□□□ 0.83
FDPS-212ENST00000487002 ST3GAL1Q11201 340 aa20.22■□□□□ 0.83
FDPS-212ENST00000487002 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.22■□□□□ 0.83
FDPS-212ENST00000487002 TPCN1Q9ULQ1 816 aa20.22■□□□□ 0.83
FDPS-212ENST00000487002 PRIM1P49642 420 aaKnown RBP20.22■□□□□ 0.83
FDPS-212ENST00000487002 CSPP1Q1MSJ5 1256 aa20.22■□□□□ 0.83
FDPS-212ENST00000487002 USP48Q86UV5 1035 aa20.22■□□□□ 0.83
FDPS-212ENST00000487002 KLHL34Q8N239 644 aa20.22■□□□□ 0.83
FDPS-212ENST00000487002 LARP6Q9BRS8 491 aaKnown RBP20.22■□□□□ 0.83
FDPS-212ENST00000487002 KDM4FA0A1W2PPD8 638 aa20.21■□□□□ 0.83
FDPS-212ENST00000487002 KIF6Q6ZMV9 814 aa20.21■□□□□ 0.83
FDPS-212ENST00000487002 PLA2G12BQ9BX93 195 aa20.21■□□□□ 0.83
FDPS-212ENST00000487002 HELLSQ9NRZ9 838 aa20.2■□□□□ 0.83
FDPS-212ENST00000487002 MTMR6Q9Y217 621 aa20.2■□□□□ 0.83
FDPS-212ENST00000487002 SYCE3A1L190 88 aa20.2■□□□□ 0.82
FDPS-212ENST00000487002 PDCP20941 246 aa20.2■□□□□ 0.82
FDPS-212ENST00000487002 CLCN1P35523 988 aa20.2■□□□□ 0.82
FDPS-212ENST00000487002 RBSNQ9H1K0 784 aa20.2■□□□□ 0.82
FDPS-212ENST00000487002 PAG1Q9NWQ8 432 aa20.2■□□□□ 0.82
FDPS-212ENST00000487002 STARD3NLO95772 234 aa20.19■□□□□ 0.82
FDPS-212ENST00000487002 PCCAP05165 728 aaPredicted RBP20.19■□□□□ 0.82
FDPS-212ENST00000487002 DDX46Q7L014 1031 aaKnown RBP20.19■□□□□ 0.82
FDPS-212ENST00000487002 LAMA4Q16363 1823 aa20.19■□□□□ 0.82
FDPS-212ENST00000487002 PIGBQ92521 554 aa20.19■□□□□ 0.82
FDPS-212ENST00000487002 NEUROD6Q96NK8 337 aa20.19■□□□□ 0.82
FDPS-212ENST00000487002 AHDC1Q5TGY3 1603 aaPredicted RBP20.18■□□□□ 0.82
FDPS-212ENST00000487002 MYH3P11055 1940 aa20.18■□□□□ 0.82
FDPS-212ENST00000487002 UBE2HP62256 183 aa20.18■□□□□ 0.82
FDPS-212ENST00000487002 TOB2Q14106 344 aaPredicted RBP20.18■□□□□ 0.82
FDPS-212ENST00000487002 CNPY2Q9Y2B0 182 aa20.18■□□□□ 0.82
FDPS-212ENST00000487002 BCL9O00512 1426 aa20.18■□□□□ 0.82
FDPS-212ENST00000487002 COL16A1Q07092 1604 aaPredicted RBP20.18■□□□□ 0.82
FDPS-212ENST00000487002 NEK1Q96PY6 1258 aa20.17■□□□□ 0.82
FDPS-212ENST00000487002 BTG4Q9NY30 223 aa20.17■□□□□ 0.82
FDPS-212ENST00000487002 ABCC12Q96J65 1359 aa20.17■□□□□ 0.82
FDPS-212ENST00000487002 CDHR2Q9BYE9 1310 aa20.17■□□□□ 0.82
FDPS-212ENST00000487002 A0A1B0GUL7 405 aa20.17■□□□□ 0.82
FDPS-212ENST00000487002 ESPNB1AK53 854 aa20.17■□□□□ 0.82
FDPS-212ENST00000487002 GADD45BO75293 160 aaPredicted RBP20.17■□□□□ 0.82
FDPS-212ENST00000487002 CCDC57Q2TAC2 916 aa20.17■□□□□ 0.82
FDPS-212ENST00000487002 LRRC24Q50LG9 513 aa20.17■□□□□ 0.82
FDPS-212ENST00000487002 DNAJC10Q8IXB1 793 aa20.17■□□□□ 0.82
FDPS-212ENST00000487002 DSCC1Q9BVC3 393 aa20.17■□□□□ 0.82
FDPS-212ENST00000487002 GDPD2Q9HCC8 539 aa20.17■□□□□ 0.82
FDPS-212ENST00000487002 TAF6LQ9Y6J9 622 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms