RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 FAM182BQ5T319 152 aa9.83□□□□□ -0.84
SF3B1-210ENST00000482158 ZNF787Q6DD87 383 aa9.83□□□□□ -0.84
SF3B1-210ENST00000482158 NLRP13Q86W25 1043 aa9.83□□□□□ -0.84
SF3B1-210ENST00000482158 TTC16Q8NEE8 873 aa9.83□□□□□ -0.84
SF3B1-210ENST00000482158 CSRNP1Q96S65 589 aa9.83□□□□□ -0.84
SF3B1-210ENST00000482158 CHRDQ9H2X0 955 aa9.83□□□□□ -0.84
SF3B1-210ENST00000482158 CNTN3Q9P232 1028 aa9.83□□□□□ -0.84
SF3B1-210ENST00000482158 C2CD2LO14523 706 aa9.82□□□□□ -0.84
SF3B1-210ENST00000482158 USPL1Q5W0Q7 1092 aa9.82□□□□□ -0.84
SF3B1-210ENST00000482158 KRT25Q7Z3Z0 450 aa9.82□□□□□ -0.84
SF3B1-210ENST00000482158 NPAS3Q8IXF0 933 aa9.82□□□□□ -0.84
SF3B1-210ENST00000482158 PNMA6FA0A0J9YX94 578 aa9.81□□□□□ -0.84
SF3B1-210ENST00000482158 EIF1AYO14602 144 aaKnown RBP9.81□□□□□ -0.84
SF3B1-210ENST00000482158 RBM25P49756 843 aaKnown RBP9.81□□□□□ -0.84
SF3B1-210ENST00000482158 RAB44Q7Z6P3 723 aaPredicted RBP9.81□□□□□ -0.84
SF3B1-210ENST00000482158 NPM2Q86SE8 214 aaKnown RBP9.81□□□□□ -0.84
SF3B1-210ENST00000482158 C1orf127Q8N9H9 656 aa9.81□□□□□ -0.84
SF3B1-210ENST00000482158 TRERF1Q96PN7 1200 aa9.81□□□□□ -0.84
SF3B1-210ENST00000482158 ZFYVE28Q9HCC9 887 aa9.81□□□□□ -0.84
SF3B1-210ENST00000482158 PHF24Q9UPV7 400 aa9.81□□□□□ -0.84
SF3B1-210ENST00000482158 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.81□□□□□ -0.84
SF3B1-210ENST00000482158 FOXR1Q6PIV2 292 aa9.8□□□□□ -0.84
SF3B1-210ENST00000482158 SNX29Q8TEQ0 813 aa9.8□□□□□ -0.84
SF3B1-210ENST00000482158 RNF19AQ9NV58 838 aa9.8□□□□□ -0.84
SF3B1-210ENST00000482158 ABI2Q9NYB9 513 aaPredicted RBP9.8□□□□□ -0.84
SF3B1-210ENST00000482158 MMP20O60882 483 aa9.79□□□□□ -0.84
SF3B1-210ENST00000482158 LDHBP07195 334 aaKnown RBP9.79□□□□□ -0.84
SF3B1-210ENST00000482158 VSIG8P0DPA2 414 aa9.79□□□□□ -0.84
SF3B1-210ENST00000482158 NFKB1P19838 968 aa9.79□□□□□ -0.84
SF3B1-210ENST00000482158 DNAJC25Q9H1X3 360 aa9.79□□□□□ -0.84
SF3B1-210ENST00000482158 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.79□□□□□ -0.84
SF3B1-210ENST00000482158 CPNE3O75131 537 aaKnown RBP9.78□□□□□ -0.84
SF3B1-210ENST00000482158 CYP2E1P05181 493 aaPredicted RBP9.78□□□□□ -0.84
SF3B1-210ENST00000482158 BHMTQ93088 406 aa9.78□□□□□ -0.84
SF3B1-210ENST00000482158 ERBB4Q15303 1308 aa9.78□□□□□ -0.84
SF3B1-210ENST00000482158 TERTO14746 1132 aaKnown RBP9.77□□□□□ -0.85
SF3B1-210ENST00000482158 EREGO14944 169 aa9.77□□□□□ -0.85
SF3B1-210ENST00000482158 PHACTR2O75167 634 aa9.77□□□□□ -0.85
SF3B1-210ENST00000482158 MAP3K6O95382 1288 aa9.77□□□□□ -0.85
SF3B1-210ENST00000482158 NEFLP07196 543 aa9.77□□□□□ -0.85
SF3B1-210ENST00000482158 RARAP10276 462 aa9.77□□□□□ -0.85
SF3B1-210ENST00000482158 OR13H1Q8NG92 308 aa9.77□□□□□ -0.85
SF3B1-210ENST00000482158 EFCC1Q9HA90 598 aa9.77□□□□□ -0.85
SF3B1-210ENST00000482158 KIAA1522Q9P206 1035 aaPredicted RBP9.77□□□□□ -0.85
SF3B1-210ENST00000482158 PRPF40AO75400 957 aaKnown RBP9.76□□□□□ -0.85
SF3B1-210ENST00000482158 ZNF326Q5BKZ1 582 aaKnown RBP9.76□□□□□ -0.85
SF3B1-210ENST00000482158 TTC39BQ5VTQ0 682 aaPredicted RBP9.76□□□□□ -0.85
SF3B1-210ENST00000482158 TLR7Q9NYK1 1049 aaKnown RBP9.76□□□□□ -0.85
SF3B1-210ENST00000482158 KLF15Q9UIH9 416 aa9.76□□□□□ -0.85
SF3B1-210ENST00000482158 POLR3DP05423 398 aaPredicted RBP9.75□□□□□ -0.85
SF3B1-210ENST00000482158 RNFT1Q5M7Z0 435 aa9.75□□□□□ -0.85
SF3B1-210ENST00000482158 COL13A1Q5TAT6 717 aaPredicted RBP9.75□□□□□ -0.85
SF3B1-210ENST00000482158 CCDC74AQ96AQ1 378 aa9.75□□□□□ -0.85
SF3B1-210ENST00000482158 PNMA5Q96PV4 448 aa9.75□□□□□ -0.85
SF3B1-210ENST00000482158 DUSP9Q99956 384 aaKnown RBP9.75□□□□□ -0.85
SF3B1-210ENST00000482158 HOXD8P13378 290 aaPredicted RBP9.74□□□□□ -0.85
SF3B1-210ENST00000482158 MX2P20592 715 aa9.74□□□□□ -0.85
SF3B1-210ENST00000482158 IRS1P35568 1242 aa9.74□□□□□ -0.85
SF3B1-210ENST00000482158 NFX1Q12986 1120 aaKnown RBP9.74□□□□□ -0.85
SF3B1-210ENST00000482158 ZNF468Q5VIY5 522 aaPredicted RBP9.74□□□□□ -0.85
SF3B1-210ENST00000482158 ALG1LQ6GMV1 187 aa9.74□□□□□ -0.85
SF3B1-210ENST00000482158 GALNT12Q8IXK2 581 aa9.74□□□□□ -0.85
SF3B1-210ENST00000482158 KANSL3Q9P2N6 904 aa9.74□□□□□ -0.85
SF3B1-210ENST00000482158 ZBTB42B2RXF5 422 aa9.73□□□□□ -0.85
SF3B1-210ENST00000482158 BMP4P12644 408 aa9.73□□□□□ -0.85
SF3B1-210ENST00000482158 KRT76Q01546 638 aa9.73□□□□□ -0.85
SF3B1-210ENST00000482158 LCE2CQ5TA81 110 aa9.73□□□□□ -0.85
SF3B1-210ENST00000482158 PI16Q6UXB8 463 aa9.73□□□□□ -0.85
SF3B1-210ENST00000482158 DHX32Q7L7V1 743 aaKnown RBP9.73□□□□□ -0.85
SF3B1-210ENST00000482158 SYT9Q86SS6 491 aa9.73□□□□□ -0.85
SF3B1-210ENST00000482158 EPS8L3Q8TE67 593 aaKnown RBP9.73□□□□□ -0.85
SF3B1-210ENST00000482158 FBF1Q8TES7 1133 aa9.73□□□□□ -0.85
SF3B1-210ENST00000482158 COL25A1Q9BXS0 654 aaPredicted RBP9.73□□□□□ -0.85
SF3B1-210ENST00000482158 PARP2Q9UGN5 583 aa9.73□□□□□ -0.85
SF3B1-210ENST00000482158 SALL4Q9UJQ4 1053 aa9.73□□□□□ -0.85
SF3B1-210ENST00000482158 CES1P23141 567 aa9.72□□□□□ -0.85
SF3B1-210ENST00000482158 SOX18P35713 384 aa9.72□□□□□ -0.85
SF3B1-210ENST00000482158 ATP2B2Q01814 1243 aa9.72□□□□□ -0.85
SF3B1-210ENST00000482158 PMEPA1Q969W9 287 aa9.72□□□□□ -0.85
SF3B1-210ENST00000482158 MRRFQ96E11 262 aaKnown RBP9.72□□□□□ -0.85
SF3B1-210ENST00000482158 FAM161BQ96MY7 647 aa9.72□□□□□ -0.85
SF3B1-210ENST00000482158 MBIPQ9NS73 344 aa9.72□□□□□ -0.85
SF3B1-210ENST00000482158 PRR12Q9ULL5 1215 aa9.72□□□□□ -0.85
SF3B1-210ENST00000482158 KIF4AO95239 1232 aa9.71□□□□□ -0.86
SF3B1-210ENST00000482158 PCBP4P57723 403 aaKnown RBP9.71□□□□□ -0.86
SF3B1-210ENST00000482158 DAB2P98082 770 aa9.71□□□□□ -0.86
SF3B1-210ENST00000482158 MDFIQ99750 246 aa9.71□□□□□ -0.86
SF3B1-210ENST00000482158 NPHS2Q9NP85 383 aa9.71□□□□□ -0.86
SF3B1-210ENST00000482158 LATS2Q9NRM7 1088 aa9.71□□□□□ -0.86
SF3B1-210ENST00000482158 SIN3BO75182 1162 aa9.7□□□□□ -0.86
SF3B1-210ENST00000482158 PSAPP07602 524 aa9.7□□□□□ -0.86
SF3B1-210ENST00000482158 PLAURQ03405 335 aa9.7□□□□□ -0.86
SF3B1-210ENST00000482158 MRPL58Q14197 206 aaKnown RBP9.7□□□□□ -0.86
SF3B1-210ENST00000482158 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.7□□□□□ -0.86
SF3B1-210ENST00000482158 PEAR1Q5VY43 1037 aaPredicted RBP9.7□□□□□ -0.86
SF3B1-210ENST00000482158 TMC4Q7Z404 712 aa9.7□□□□□ -0.86
SF3B1-210ENST00000482158 TRPM4Q8TD43 1214 aa9.7□□□□□ -0.86
SF3B1-210ENST00000482158 AVENQ9NQS1 362 aaPredicted RBP9.7□□□□□ -0.86
SF3B1-210ENST00000482158 ARAFP10398 606 aa9.69□□□□□ -0.86
SF3B1-210ENST00000482158 NRLP54845 237 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms