RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 IFT57Q9NWB7 429 aa5.58□□□□□ -1.52
POLR2B-208ENST00000478188 THSD7BQ9C0I4 1608 aa5.58□□□□□ -1.52
POLR2B-208ENST00000478188 SPEF2Q9C093 1822 aa5.57□□□□□ -1.52
POLR2B-208ENST00000478188 HOXB7P09629 217 aa5.57□□□□□ -1.52
POLR2B-208ENST00000478188 WDR43Q15061 677 aaKnown RBP eCLIP5.57□□□□□ -1.52
POLR2B-208ENST00000478188 CLEC4GQ6UXB4 293 aa5.57□□□□□ -1.52
POLR2B-208ENST00000478188 PSME4Q14997 1843 aa5.57□□□□□ -1.52
POLR2B-208ENST00000478188 IL16Q14005 1332 aa5.57□□□□□ -1.52
POLR2B-208ENST00000478188 MAP3K15Q6ZN16 1313 aa5.57□□□□□ -1.52
POLR2B-208ENST00000478188 SERPINB2P05120 415 aa5.57□□□□□ -1.52
POLR2B-208ENST00000478188 DZIP3Q86Y13 1208 aaKnown RBP5.57□□□□□ -1.52
POLR2B-208ENST00000478188 TSPYL4Q9UJ04 414 aa5.57□□□□□ -1.52
POLR2B-208ENST00000478188 TBC1D2BQ9UPU7 963 aa5.57□□□□□ -1.52
POLR2B-208ENST00000478188 ERVV-1B6SEH8 477 aa5.56□□□□□ -1.52
POLR2B-208ENST00000478188 WWC1Q8IX03 1113 aa5.56□□□□□ -1.52
POLR2B-208ENST00000478188 ZNF34Q8IZ26 560 aa5.56□□□□□ -1.52
POLR2B-208ENST00000478188 PARP3Q9Y6F1 533 aa5.56□□□□□ -1.52
POLR2B-208ENST00000478188 A0A0G2JLW4 131 aa5.56□□□□□ -1.52
POLR2B-208ENST00000478188 KIF3CO14782 793 aa5.56□□□□□ -1.52
POLR2B-208ENST00000478188 ZPR1O75312 459 aa5.56□□□□□ -1.52
POLR2B-208ENST00000478188 NTSR2O95665 410 aa5.56□□□□□ -1.52
POLR2B-208ENST00000478188 CHRNA5P30532 468 aa5.56□□□□□ -1.52
POLR2B-208ENST00000478188 C7orf43Q8WVR3 580 aa5.56□□□□□ -1.52
POLR2B-208ENST00000478188 CRY2Q49AN0 593 aa5.55□□□□□ -1.52
POLR2B-208ENST00000478188 C8orf58Q8NAV2 365 aa5.55□□□□□ -1.52
POLR2B-208ENST00000478188 RNF166Q96A37 237 aaPredicted RBP5.55□□□□□ -1.52
POLR2B-208ENST00000478188 SLC51AQ86UW1 340 aa5.55□□□□□ -1.52
POLR2B-208ENST00000478188 KLRG1Q96E93 195 aa5.55□□□□□ -1.52
POLR2B-208ENST00000478188 MRS2Q9HD23 443 aa5.55□□□□□ -1.52
POLR2B-208ENST00000478188 DDX21Q9NR30 783 aaKnown RBP eCLIP5.55□□□□□ -1.52
POLR2B-208ENST00000478188 ANP32CO43423 234 aa5.54□□□□□ -1.52
POLR2B-208ENST00000478188 ANXA1P04083 346 aa5.54□□□□□ -1.52
POLR2B-208ENST00000478188 GIGYF2Q6Y7W6 1299 aaKnown RBP5.54□□□□□ -1.52
POLR2B-208ENST00000478188 TSPYL6Q8N831 410 aa5.54□□□□□ -1.52
POLR2B-208ENST00000478188 BRIP1Q9BX63 1249 aa5.54□□□□□ -1.52
POLR2B-208ENST00000478188 CHPF2Q9P2E5 772 aa5.54□□□□□ -1.52
POLR2B-208ENST00000478188 FANCIQ9NVI1 1328 aa5.54□□□□□ -1.52
POLR2B-208ENST00000478188 NFKBIEO00221 500 aa5.54□□□□□ -1.52
POLR2B-208ENST00000478188 NEUROD2Q15784 382 aa5.54□□□□□ -1.52
POLR2B-208ENST00000478188 COL13A1Q5TAT6 717 aaPredicted RBP5.54□□□□□ -1.52
POLR2B-208ENST00000478188 GRIN3BO60391 1043 aa5.54□□□□□ -1.52
POLR2B-208ENST00000478188 NEFMP07197 916 aa5.54□□□□□ -1.52
POLR2B-208ENST00000478188 SRGNP10124 158 aa5.54□□□□□ -1.52
POLR2B-208ENST00000478188 GNAI1P63096 354 aa5.54□□□□□ -1.52
POLR2B-208ENST00000478188 DUSP27Q5VZP5 1158 aa5.54□□□□□ -1.52
POLR2B-208ENST00000478188 KHSRPQ92945 711 aaKnown RBP eCLIP5.54□□□□□ -1.522e-7■■■□□ 15
POLR2B-208ENST00000478188 ISCA1Q9BUE6 129 aa5.54□□□□□ -1.52
POLR2B-208ENST00000478188 PRDM10Q9NQV6 1147 aa5.54□□□□□ -1.52
POLR2B-208ENST00000478188 SUSD4Q5VX71 490 aa5.53□□□□□ -1.52
POLR2B-208ENST00000478188 STYK1Q6J9G0 422 aa5.53□□□□□ -1.52
POLR2B-208ENST00000478188 ANKRD13DQ6ZTN6 518 aa5.53□□□□□ -1.52
POLR2B-208ENST00000478188 TRMT2AQ8IZ69 625 aaKnown RBP5.53□□□□□ -1.52
POLR2B-208ENST00000478188 PCDHGA4Q9Y5G9 962 aa5.53□□□□□ -1.52
POLR2B-208ENST00000478188 LTBP3Q9NS15 1303 aa5.53□□□□□ -1.52
POLR2B-208ENST00000478188 CCER2I3L3R5 266 aa5.53□□□□□ -1.52
POLR2B-208ENST00000478188 NUDT7P0C024 238 aa5.53□□□□□ -1.52
POLR2B-208ENST00000478188 MYL6BP14649 208 aa5.53□□□□□ -1.52
POLR2B-208ENST00000478188 PBX2P40425 430 aa5.53□□□□□ -1.52
POLR2B-208ENST00000478188 GPR162Q16538 588 aa5.53□□□□□ -1.52
POLR2B-208ENST00000478188 SLC10A5Q5PT55 438 aa5.53□□□□□ -1.52
POLR2B-208ENST00000478188 WDR63Q8IWG1 891 aa5.53□□□□□ -1.52
POLR2B-208ENST00000478188 CCDC24Q8N4L8 307 aa5.53□□□□□ -1.52
POLR2B-208ENST00000478188 XAGE3Q8WTP9 111 aa5.53□□□□□ -1.52
POLR2B-208ENST00000478188 TSR2Q969E8 191 aaKnown RBP5.53□□□□□ -1.52
POLR2B-208ENST00000478188 TSHZ2Q9NRE2 1034 aa5.53□□□□□ -1.52
POLR2B-208ENST00000478188 SCN4AP35499 1836 aa5.53□□□□□ -1.52
POLR2B-208ENST00000478188 RNF123Q5XPI4 1314 aa5.53□□□□□ -1.52
POLR2B-208ENST00000478188 HOXA10P31260 410 aaPredicted RBP5.52□□□□□ -1.53
POLR2B-208ENST00000478188 BICDL1Q6ZP65 573 aa5.52□□□□□ -1.53
POLR2B-208ENST00000478188 NLRP10Q86W26 655 aa5.52□□□□□ -1.53
POLR2B-208ENST00000478188 C2CD5Q86YS7 1000 aa5.52□□□□□ -1.53
POLR2B-208ENST00000478188 CNBD1Q8NA66 436 aa5.52□□□□□ -1.53
POLR2B-208ENST00000478188 ZBTB3Q9H5J0 574 aa5.52□□□□□ -1.53
POLR2B-208ENST00000478188 PIM2Q9P1W9 311 aa5.52□□□□□ -1.53
POLR2B-208ENST00000478188 ERFEQ4G0M1 354 aa5.52□□□□□ -1.53
POLR2B-208ENST00000478188 COPS6Q7L5N1 327 aa5.52□□□□□ -1.53
POLR2B-208ENST00000478188 SETDB2Q96T68 719 aa5.52□□□□□ -1.53
POLR2B-208ENST00000478188 PDZRN3Q9UPQ7 1066 aa5.52□□□□□ -1.53
POLR2B-208ENST00000478188 NIP7Q9Y221 180 aaKnown RBP eCLIP5.52□□□□□ -1.53
POLR2B-208ENST00000478188 ZNF652Q9Y2D9 606 aa5.52□□□□□ -1.53
POLR2B-208ENST00000478188 TRIM28Q13263 835 aaKnown RBP5.51□□□□□ -1.53
POLR2B-208ENST00000478188 DALRD3Q5D0E6 543 aaKnown RBP5.51□□□□□ -1.53
POLR2B-208ENST00000478188 HDGFL1Q5TGJ6 251 aa5.51□□□□□ -1.53
POLR2B-208ENST00000478188 PLBD2Q8NHP8 589 aa5.51□□□□□ -1.53
POLR2B-208ENST00000478188 PHAXQ9H814 394 aaKnown RBP5.51□□□□□ -1.53
POLR2B-208ENST00000478188 SCN9AQ15858 1988 aa5.51□□□□□ -1.53
POLR2B-208ENST00000478188 ARAP2Q8WZ64 1704 aa5.51□□□□□ -1.53
POLR2B-208ENST00000478188 VAMP4O75379 141 aa5.51□□□□□ -1.53
POLR2B-208ENST00000478188 EIF2S2P20042 333 aaKnown RBP5.51□□□□□ -1.53
POLR2B-208ENST00000478188 RASSF7Q02833 373 aa5.51□□□□□ -1.53
POLR2B-208ENST00000478188 CALD1Q05682 793 aaKnown RBP5.51□□□□□ -1.53
POLR2B-208ENST00000478188 FSTL1Q12841 308 aa5.51□□□□□ -1.53
POLR2B-208ENST00000478188 TCIRG1Q13488 830 aa5.51□□□□□ -1.53
POLR2B-208ENST00000478188 NGEFQ8N5V2 710 aa5.51□□□□□ -1.53
POLR2B-208ENST00000478188 DBF4Q9UBU7 674 aaPredicted RBP5.51□□□□□ -1.53
POLR2B-208ENST00000478188 WWC3Q9ULE0 1092 aa5.51□□□□□ -1.53
POLR2B-208ENST00000478188 PDE6BP35913 854 aa5.51□□□□□ -1.53
POLR2B-208ENST00000478188 PARP10Q53GL7 1025 aa5.51□□□□□ -1.53
POLR2B-208ENST00000478188 KIF6Q6ZMV9 814 aa5.51□□□□□ -1.53
POLR2B-208ENST00000478188 G2E3Q7L622 706 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms